New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4632161 =	134 (1.030)	6 (0.050)	4/264	NT	4.5%	coding (1429/1938 nt)	slt	lytic murein transglycosylase, soluble
	?	NC_000913	4632202 =	125 (1.020)					coding (1470/1938 nt)	slt	lytic murein transglycosylase, soluble
Rejected: Frequency below/above cutoff threshold.

TACCAGGCATAATCTGCATCAAGCCGCTGGCCCCTACCGGTGATTTCACTTTCGGATTCCAGGCGCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4632314‑4632161 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcggTAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGCCAGCGGCTTGATGCAGATTATGCCTGGTACAGCGACCCATACGGTGAAGATGTTCTCTATTCCCG  >  NC_000913/4632202‑4632350                                                                                                                                                                                                                                                                                                                 TACCAGGCATAATCTGCATCAAGCCGCTGGCCCCTACCGGTGAATTCACTTTCGGATTCCAGGCGCTCTCCTGACGAGCAATCGCCATCGCATAGCTTAGCGGGAACTCCTTACCGCTTGTGTAGAGTGTGAAAAGATAGTTGTAAGCaa                                                                                                                                                           >  2:436788/1‑148    CAGGCATAATCTGCATCAAGCCGCTGGCCCCTACCGGTGATTTCACTTTCGGATTCCAGGCGCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCG                                                                                                                                                        <  1:1453413/150‑1    CAGGCATAATCTGCATCAAGCCGCTGGCCCCTACCGGTGATTTCACTTTCGGATTCCAGGCGCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCG                                                                                                                                                        >  2:1372988/1‑150    CAGGCATAATCTGCATCAAGCCGCTGGCCCCTACCGGTGATTTCACTTTCGGATTCCAGGCGCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCG                                                                                                                                                        >  2:2179000/1‑150     AGGCATAATCTGCATCAAGCCGCTGGCCCCTACCGGTGATTTCACTTTCGGATTCCAGGCGCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCGG                                                                                                                                                       <  1:1860765/150‑1                                                                                                            TCCTTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCGGGAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGCCAGCGGCTTGATGCAGATT                                                >  1:390009/1‑150                                                                                                            TCCTTACCGCTGGAGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCGGGAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGACAGCGGCTTGATGCAGATT                                                >  1:1517105/1‑150                                                                                                               TTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGCCAGCGGCTTGATGCAGATTATG                                             >  1:1749949/1‑150                                                                                                                TACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGTCGATTTCTCTTCAGGATAGAGCCTGTAATCCGAAATTGAAATCACAGAAAGGGGCCAGCGGCTTGTTGCAGATTATGC                                            >  2:293784/1‑150                                                                                                                                          TCGTTGTAAGCCAGCGGGAAGTAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGTGGCCAGCGGCTTGATGCAGATTATGCCTGGTACAGCGACCCATACGGTGAAG                  <  2:1517105/150‑1                                                                                                                                          TCGTTGTAAGCCAGCGGGAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGCCAGCGGCTTGATGCAGATTATGCCTGGTACAGCGACCCATACGGTGAAG                  <  2:390009/150‑1                                                                                                                                                    CCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGCCAGCGGCTTGATGCAGATTATGCCTGGTACTGCGACCCAGACGGTGAAGATGTTCTCTt        >  2:266318/1‑149                                                                                                                                                    CCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGCCAGCGGCTTGATGCAGATTATGCCTGGTACAGCGACCCATACGGTGAAGATGTTCTCTA        >  2:1742503/1‑150                                                                                                                                                          GTAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGCCAGCGGCTTGATGCAGATTATGCCTGGTACAGCGACCCATACGGTGAAGATGTTCTCTATTCCCG  >  1:1219759/1‑150                                                                                                                                                          GTAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGCCAGCGGCTTGATGCAGATTATGCCTGGTACAGCGACCCATACGGTGAAGATGTTCTCTATTCCCG  >  1:1846914/1‑150                                                                                                                                                          GTAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGCCAGCGGCTTGATGCAGATTATGCCTGGTACACCGCCCCAGACCCTGAAGATGTTCTCTATTCACG  >  1:103723/1‑150                                                                                                                                                                                                                                                                                                                 TACCAGGCATAATCTGCATCAAGCCGCTGGCCCCTACCGGTGATTTCACTTTCGGATTCCAGGCGCTCTCCTGACGAGCAATCGCCATCGCATAGCTTTGCGGGATCTCCTTACCGCTGGTGTAGCGTTTGAAAAGATCGTTGTAAGCCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4632314‑4632161 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcggTAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGCCAGCGGCTTGATGCAGATTATGCCTGGTACAGCGACCCATACGGTGAAGATGTTCTCTATTCCCG  >  NC_000913/4632202‑4632350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.