| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 781369 = | 79 (0.610) | 19 (0.150) +GAG |
11/272 | NT | 26.1% | noncoding (1/76 nt) | lysZ | tRNA‑Lys |
| ? | NC_000913 | = 2521006 | 31 (0.240) | noncoding (76/76 nt) | valU | tRNA‑Val | |||||
CGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGT > NC_000913/2520858‑2521151 | cgaacgaaCAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCaa > 1:619615/1‑150 (MQ=255)cgaacgaaCAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCaa > 1:1912052/1‑150 (MQ=255) gaacgaacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAac < 1:735147/150‑1 (MQ=255) aactaacAATTTCTTAAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCATCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAact < 1:1094120/150‑1 (MQ=255) acgaacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAatta > 1:724248/1‑150 (MQ=255) aacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACtt < 2:592211/150‑1 (MQ=255) aacAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCACCCTATAATGCGACTCCACACAGCGGGGGTGATTAGATCAGCTGGGAGAGCACCTACCTTACAAGGAGGGGGTCGGCGGTTCGAGCCCGTCATCACCCACAACATACtt > 1:1916061/1‑150 (MQ=25) aTTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATg < 2:683691/150‑1 (MQ=255) ttCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTa < 2:696375/150‑1 (MQ=255) ttCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTa < 1:1177595/150‑1 (MQ=255) aaTGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCATCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTccgccg < 1:1615823/150‑1 (MQ=255) aaTGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTccgccg < 1:836156/150‑1 (MQ=255) tGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCgtg < 1:295483/150‑1 (MQ=255) gCGTTGCCTCATATTGAACTCTCCCAATAAAGCGACTCCACCCAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCAGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCgtgt < 1:279133/150‑1 (MQ=25) cGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTa < 1:466077/150‑1 (MQ=255) cGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTGTCTGTAGTCTGCGCCGGGTa > 1:698098/1‑150 (MQ=255) cATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGaaa < 1:60388/150‑1 (MQ=255) gAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTgaga < 1:1157841/150‑1 (MQ=255) aaCTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGATCACCTCCCTTACAAGGAGGGGGGCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAATTTGAGaa < 1:1601812/150‑1 (MQ=255) tcCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTggg < 2:699170/150‑1 (MQ=255) ccTTTAATGCGACTCCACACAGCTGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCTAGAAATTGAGAAGTGGGTg < 2:550231/150‑1 (MQ=255) ccTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAcgtcgggtcgttagctcagttggtagagcaggtgacttttaataaattg < 2:776976‑M2/150‑50 (MQ=255) ccTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTg < 2:1417778/150‑1 (MQ=255) ccTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACACACCAATTACTATCAGTAGTCTGGGCGGGGTAGAATGTGATTGAGGGGTggggg > 1:1143687/1‑148 (MQ=17) aTGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGc < 1:2113522/150‑1 (MQ=255) gACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAg < 2:418/150‑1 (MQ=255) ccACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActtcgggtcgtta > 1:567555‑M2/1‑87 (MQ=255) ccACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActtcgggtcgtta < 2:567555‑M2/100‑14 (MQ=255) cactcaGCGGGGTTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGATCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTggg < 1:1753025/150‑1 (MQ=255) cacaTCGGGTGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGTGGTCGGCGGTTCGATCCCGTCATCACCCACGAACTACTTTATTTAGTCTCCGCCGTGTAGCAAGAAATTGAGTAGTGGGTGATTAGCTCAGCTGGgag < 2:1855004/150‑1 (MQ=25) gTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgaccca > 1:1900283‑M2/1‑74 (MQ=255) ggaTTACCCCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccac > 1:1512796‑M2/2‑73 (MQ=255) gATTAGCTCAGCTGGGAGAGCACCTCCCTTACATGGAGGGGGTCGGCGGTTCGATCCCGTCATCCCCCACCActcgggtcgttagctcagttggtagagcagttgccttttaatcaattggtcgcaggttcgaatcctgcacgacccacc < 1:1685818‑M2/150‑79 (MQ=255) gCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccaccaattt < 1:939481‑M2/150‑84 (MQ=255) cTCAGCTGTGAGACCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGGCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAagg < 1:1757817/150‑1 (MQ=255) cTGGGAGCGCACCAGCCTTACAAGGAGGGGGTCGTCGGATCGATCCCGTCAGCACCCACCAACTCCTTTTTGGAGCCTCCGCCGTGTAGCAAGAAATGGAGACGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAgggg < 1:2213242/150‑1 (MQ=25) gagaTCACCTCAATTACAAGGAGGGGGTCGGCGGATATATCCCGTAATCAACCCCCTctcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccaccaatttaaaggtggtt > 2:939481‑M2/1‑57 (MQ=255) gCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAAATACTTTATGTACTCACCGACGTTTAAAAAGAAAATCATAAGTGGGGGATTAGATCAGCTGTGAGAGCACATACCGTTAAAGGAGGTGTTcggctg > 2:2007305/1‑148 (MQ=16) cTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccaccaattttaaggtggatactggtagataa < 2:73680‑M2/150‑106 (MQ=255) cTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgac > 1:1306682‑M2/1‑45 (MQ=255) cTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgac < 2:1306682‑M2/118‑74 (MQ=255) aaGGAGGGTGTCGGCTGTTCTATAGCGTCATAACACTCGTACTACTTTTTTTATTCTCCGCCTTGTAGCTAGAAATAGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGtca < 2:1044867/150‑1 (MQ=17) gggTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATTTAGTAACCGACGTGTAGCAAGAAAATTATAAGTGGGTGATTAGATCAGATGTGATAGCAAATCCCTTACAAGGAGTGGGTCGGCGGTTCGATACAGTCATcacaca > 2:720021/1‑150 (MQ=21) aggTTCGATCCCGTCATCAACAACCAACTACTTTTTGTAGTCTCCGCCTTTTAGCCAGTAAATCCTCCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACttt < 2:1603049/149‑1 (MQ=17) gTTCGATCCCGTCATCACCCACCACATACTTTATTTAGTATAGGACGTGTAGCAAGTGAATTAGAAGAGTGTGATTAGATCAGCTAGTACAGCACCACCCAGACAAGTAATAAGTCGGCGGTTAGGGCCAGTAATCACCcaccacatagc > 2:1867392/1‑145 (MQ=255) gATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccaccaatttaaaggtggatagtggtagagaacgtgaaggataacctttcgttagca < 2:1384775‑M2/150‑131 (MQ=255) gATCCCGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgactattaatcaattggtcgcaggttcgaatcctgcacgacccaccaatttaaaggtggttactggtagagaacgtgaaggataacgttgcgttagca < 2:397255‑M2/150‑131 (MQ=255) ccGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcc < 2:1574943‑M2/81‑66 (MQ=255) ccGTCATCACCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcc > 1:1574943‑M2/1‑16 (MQ=255) tcaCCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccaccaatttaaaggtggttactggtag < 2:1489560‑M2/111‑102 (MQ=255) tcaCCCACCActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccaccaatttaaaggtggttactggtag > 1:1489560‑M2/1‑10 (MQ=255) cacccaccActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccaccaatttaaaggtgg < 2:1047542‑M2/100‑92 (MQ=255) cacccaccActcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccaccaatttaaaggtgg > 1:1047542‑M2/1‑9 (MQ=255) cccaccAACTCCCATATGGAGTCTCCGCCGTCTAGCTAGAACTTGATCCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCtt < 1:651591/150‑1 (MQ=18) cccaccAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGATAAAATTCtt > 2:653819/1‑150 (MQ=255) ccaccaACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTTCAAGGAGGGGGTCGGCGGTTCGATCCCGTGATCACCCACCACTTggggtcgttagatcattagtg < 2:272396‑M2/150‑22 (MQ=255) caccactcgggtcgttagctcagttggtagagcagttgacttttaatcaattggtcgcaggttcgaatcctgcacgacccaccaatttaaacggggttactggtagagaccgtgaaggataacgttgcgttagcaacggcccgaagggcg > 1:292813‑M2/1‑5 (MQ=255) cactcgggtcgttagctcagttggtagagcagttgacttttaatcaat < 1:1326060‑M2/48‑47 (MQ=255) cactcgggtcgttagctcagttggtagagcagttgacttttaatcaat > 2:1326060‑M2/1‑2 (MQ=255) | CGAACGAACAATTTCTTTAGAAAATGCGTTGACTCATTTTGAACTCTCCCTATAATGCGACTCCACACAGCGGGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGT > NC_000913/2520858‑2521151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |