| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,104,932 | C→T | 5.4% | intergenic (+30/‑29) | csgA → / → csgC | curlin subunit, amyloid curli fibers, cryptic/curli assembly protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,104,932 | 0 | C | T | 5.4% | 536.7 / 11.4 | 167 | intergenic (+30/‑29) | csgA/csgC | curlin subunit, amyloid curli fibers, cryptic/curli assembly protein |
| Reads supporting (aligned to +/- strand): ref base C (72/84); new base T (2/7); total (74/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.66e-01 | |||||||||||
Only 100 of 171 total aligned reads displayed.
ATGACGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCAGAG > NC_000913/1104783‑1105081 | aTGACGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGgcgc > 1:2017267/1‑150 (MQ=255) tGACTGTTAAACAGTGCGGTGGTGGCAACTGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCa < 2:733823/150‑1 (MQ=255) aCGGTTAAACAGTTCGTTGGTGGAAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGATTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAg < 1:1970319/150‑1 (MQ=255) aCGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAg > 1:1926733/1‑150 (MQ=255) cGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGc > 1:1241624/1‑150 (MQ=255) cGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGc > 1:1707809/1‑150 (MQ=255) cGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGc > 2:545029/1‑150 (MQ=255) aaCAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTTGCGCCCTG‑‑tt < 2:1236040/150‑1 (MQ=255) cAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACTTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑tttt < 2:1943764/150‑1 (MQ=255) cAGTTCGGTGGTGGCAACGGTGCGGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGGTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTTGCGCCCTG‑‑tttc < 1:870233/150‑2 (MQ=255) cAGTGCGGTTGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCTTCAACGTGACTCAGGTTGGCTTTTGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTTGCGCCCTG‑‑tttc < 1:1901726/150‑2 (MQ=255) aGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCTACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑ttttt > 1:80473/1‑150 (MQ=255) aGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTTGCGCCCTG‑‑tttct < 1:1596410/150‑3 (MQ=255) aGTTCGGTGGGGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTTGCGCCCTG‑‑tttct < 2:2056492/150‑3 (MQ=255) gcGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑tttttttt < 1:597841/149‑1 (MQ=255) gttgaggCCACGGGGCTGCAGTTGACCAGACTGGATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCGCATCAGTACTACTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCgg < 2:170277/145‑1 (MQ=255) gtggtgGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCgg < 2:1480075/150‑1 (MQ=255) tggtggCAACGGTGATGAATTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGAATCAGGTTGGCTTTGGTAACAACGCGACCGCTCTTCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCggg < 2:787350/150‑1 (MQ=255) ggtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGga > 2:1988129/1‑150 (MQ=255) aaCGGTGCTGCAGGTGACCAGACTGCATCTAACTCCTCCGGCAACGGGACTCCGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAgaagaa < 2:207869/150‑1 (MQ=255) aCGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAat < 1:753900/150‑1 (MQ=255) ctgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAAt > 1:1103549/1‑150 (MQ=255) gcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGAAACAACGCGACCGCTCATCAGTACTAATACATCATGTGTATTACAGAAACAGGGCTCAAGCCCTG‑‑TTTGTATACTCGAGAACAATATGACTaa > 2:959319/1‑149 (MQ=255) cAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTAGGGAGAAGAATATGAATACg > 1:1253061/1‑150 (MQ=255) gTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGtt > 2:887855/1‑150 (MQ=255) gTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGtt < 1:1802430/150‑1 (MQ=255) ttGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAAAACGtta > 2:1950872/1‑150 (MQ=255) gACCAGACTGCATCTACCTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTACCAACGCGCCCGCTCATCAGTACTAATACATCATTTGTATTTCAGAAACAGGGCGCAAGCCCTG‑‑TGTTTTTTCGGGAGAAGAATATGAATACGttatt > 2:2107045/1‑150 (MQ=255) gACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGttatt < 1:1318136/150‑1 (MQ=255) gACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGttatt > 2:628484/1‑150 (MQ=255) gACCAGACTGCATCTAACTCCTCCGTCAAAGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCATG‑‑TTTTTTTTCGTGAGAAGAATATGAATACGttatt > 1:916544/1‑150 (MQ=255) aCTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCt > 1:1583832/1‑150 (MQ=255) gCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGc > 1:2020111/1‑150 (MQ=255) gCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGc < 2:1099672/150‑1 (MQ=255) aTCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCgg < 2:1726829/150‑1 (MQ=255) tCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGc < 2:1289460/150‑1 (MQ=255) tCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGc < 2:1064917/150‑1 (MQ=255) cTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCa > 2:540143/1‑150 (MQ=255) tgaCTCCTCCGTCAACGTGACTCAGGTTGGCTATGGTAACAACGCGACCGCTCATCAGTACTAATACATAATTTGTATTACAGAAACAGGGCTCAAGCCCTG‑‑TTATTTTTAGGGATCAGAATATGAATACGTTATTACTCATTGCGGCAc > 1:129128/3‑150 (MQ=255) tAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCAc < 1:1525469/150‑1 (MQ=255) aaCTCCTCCGTCAACGTGACTCAGGGTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTTTTACAGAAACAGGGCGCAAGCCCTG‑‑GTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCaat > 1:1776678/1‑148 (MQ=255) ctcctcCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAATCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACttt > 2:1609339/1‑150 (MQ=255) acctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTc < 2:125741/149‑1 (MQ=255) cccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATCCATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAg < 1:1731189/149‑1 (MQ=255) accGTCCACGGGACCCCGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGACACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAg < 1:969687/149‑1 (MQ=255) cGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCAAGTc > 2:2010135/1‑150 (MQ=255) tCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAg < 2:1764132/150‑1 (MQ=255) tCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAg < 1:2202136/150‑1 (MQ=255) tCAACGTGACTCAGGTAGGCTTTGGTAACAACGCGACCGCTCATCAGTTATAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAg < 2:459676/150‑1 (MQ=255) cAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGa < 2:1856983/150‑1 (MQ=255) aaCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACATTATTAATCCTTGCGGCACTTTCCAGTCAGAt > 2:1774037/1‑150 (MQ=255) cTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCttt < 1:1064438/150‑1 (MQ=255) cTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCttt > 1:2112078/1‑150 (MQ=255) atctggTTGGCTTTGGTAAGAACGCGACCTCTCATCAGTACTTATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTGGGGAGAAGAATATGAATACGTTATTACTCCTTGCTGCACTTTCCAGTCAGATAACCttt < 1:1496928/146‑1 (MQ=255) cAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTaa > 1:2141197/1‑150 (MQ=255) ggTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATa < 2:939036/150‑1 (MQ=255) ttGGCTTTGGGAACCACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACACGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACg < 2:221633/150‑1 (MQ=255) tttGGTAACAACGCGACCGCTCATCAGTACTAATACCTCAGTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGTTAGAATAATATGTCTACGTTATTACTCCGTGCGGCACTTTCCAGTCAGATAACCTTTAAGACGAcccc > 2:1581377/1‑149 (MQ=255) ttGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAg < 2:2032725/150‑1 (MQ=255) tGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGc < 2:1671639/150‑1 (MQ=255) ggTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCa > 1:377965/1‑150 (MQ=255) tAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAg > 2:1544854/1‑150 (MQ=255) acaacGCGTACTCTCATCATTACTAATACTTCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAg < 2:180072/150‑1 (MQ=255) acaacGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAggg < 1:978374/150‑1 (MQ=255) acaacGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAggg < 2:302322/150‑1 (MQ=255) aacGCGACCGCTCATCAGTACTAATAAATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGa > 1:1399400/1‑150 (MQ=255) cgcgACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtg < 2:968958/150‑1 (MQ=255) cgACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtgtg < 2:569634/150‑1 (MQ=255) cccGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAATAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGta < 1:926607/149‑1 (MQ=255) aCCGGTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGACACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGta < 1:1613728/150‑1 (MQ=255) ccGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGtat > 2:1774670/1‑150 (MQ=255) gCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATAc < 1:1988129/150‑1 (MQ=255) caGTACTAATACATCATATGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCattat < 1:463073/150‑1 (MQ=255) aCTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAAAACGACCCAGCAAGGGGATGTGTATACCATAAATCCt > 2:640884/1‑150 (MQ=255) cTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTg > 1:1874602/1‑150 (MQ=255) tAATACATCATTTGTATTACAGAAACAGGGAGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTGCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGa < 2:1037743/150‑1 (MQ=255) aaTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGaa > 1:948170/1‑150 (MQ=255) aaTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACACAGCAAGGGGATGTGTATACGATTATTCCTGaa > 2:1324624/1‑150 (MQ=255) aaTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACCTTATTACTCCATGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTAAACCATTATTCATGaa > 2:1188588/1‑150 (MQ=255) aTACATGATTTGTATTACAGAAACAGGTCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAg < 1:706539/150‑1 (MQ=255) aTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAg < 1:800818/150‑1 (MQ=255) atcatTTGTATTACAGAAACAGGGCGAAAGCCCTT‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCATTCAGATAACCTTTTATACGACCCAGCCAGGGGATGTGTATACCATTATTCCTGAAGTCAc < 2:1487815/150‑1 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATATCCTTTAATACGACCCATCAAGGGGATGTGTATAACATTATTCCTGAAGTCAct > 2:94092/1‑150 (MQ=255) atTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCActct < 2:514791/150‑1 (MQ=255) tttGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCtt < 2:397498/150‑1 (MQ=255) tATTACAGAAACAGGGCGCAAGCCCTT‑‑TTTTTTTTAGGGAGAAGAATATTAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTc < 2:222035/150‑1 (MQ=255) cgaaaaaaaaCAGGGCTTGCGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTGTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCa > 2:933326/8‑150 (MQ=255) aTTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGTATGTGTATACCATTATTCCTGAAGTCACTCTTAATCa > 1:1551199/1‑150 (MQ=255) ttACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCaa > 1:2136941/1‑150 (MQ=255) aaaaaaaCAGGGCTTGCGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATc > 2:147006/5‑150 (MQ=255) gAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCACTCTTg > 1:987247/1‑150 (MQ=255) aaCATGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGGCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACAATTATTCCTGAAGTCACTCTTACTCAATCTTGTc < 2:1885938/150‑1 (MQ=255) aaCACGGCGCAAGCCCTT‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTAGTACTCCTTGCGGCACTTTCCAGTCAGATACCCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTc < 2:350149/150‑1 (MQ=255) aCAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCt < 2:881316/150‑1 (MQ=255) cAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCtg > 1:631141/1‑150 (MQ=255) cAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCtg > 1:484255/1‑150 (MQ=255) gggCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCtgtg > 1:84908/1‑150 (MQ=255) gcAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTTTCTGTGCaga > 1:194295/1‑150 (MQ=255) gcAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTACACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCaga > 1:1859105/1‑150 (MQ=255) cAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCagag < 2:2020111/150‑1 (MQ=255) | ATGACGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCAGAG > NC_000913/1104783‑1105081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |