| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,104,933 | A→G | 5.3% | intergenic (+31/‑28) | csgA → / → csgC | curlin subunit, amyloid curli fibers, cryptic/curli assembly protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,104,933 | 0 | A | G | 5.3% | 517.3 / 13.3 | 168 | intergenic (+31/‑28) | csgA/csgC | curlin subunit, amyloid curli fibers, cryptic/curli assembly protein |
| Reads supporting (aligned to +/- strand): ref base A (74/85); new base G (2/7); total (76/92) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.43e-01 | |||||||||||
Only 100 of 170 total aligned reads displayed.
TGACGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCAGAG > NC_000913/1104784‑1105081 | tGACTGTTAAACAGTGCGGTGGTGGCAACTGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCa < 2:733823/150‑1 (MQ=255)tGACGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCa < 2:2057162/150‑1 (MQ=255) aCGGTTAAACAGTTCGTTGGTGGAAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGATTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAg < 1:1970319/150‑1 (MQ=255) aCGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAg > 1:1926733/1‑150 (MQ=255) cGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGc > 1:1241624/1‑150 (MQ=255) cGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGc > 2:545029/1‑150 (MQ=255) cGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGc > 1:1707809/1‑150 (MQ=255) gTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGccc < 1:940879/150‑1 (MQ=255) aaCAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTTCAGAAACAGGGCGCAAGCCCTG‑‑tt > 1:39919/1‑150 (MQ=255) aaCAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTTGCGCCCTG‑‑tt < 2:1236040/150‑1 (MQ=255) cAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACTTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑tttt < 2:1943764/150‑1 (MQ=255) cAGTGCGGTTGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCTTCAACGTGACTCAGGTTGGCTTTTGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTTGCGCCCTG‑‑tttc < 1:1901726/150‑2 (MQ=255) aGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTTGCGCCCTG‑‑tttct < 2:2019926/150‑3 (MQ=255) aGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTTGCGCCCTG‑‑tttct < 1:1596410/150‑3 (MQ=255) ggtggtGGCATCGGTGCTGGAGTTGATCAGTCTGTTGCATAGTCGTCCGTCAACGTGACTCTGGTTGGCTTTGGTAACTACTCGACCGCGCATCTGTTCTATTACTTCATTTGTTTTACAGAATCAGGGCGCAAGCCCTG‑‑TTTTTTTTCg < 1:317774/150‑1 (MQ=255) gttgaggCCACGGGGCTGCAGTTGACCAGACTGGATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCGCATCAGTACTACTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCgg < 2:170277/145‑1 (MQ=255) ttgtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCTTCAACGTTACTCATGTTTGCTTTGGTAACAACTCTACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCggg < 2:270215/148‑1 (MQ=255) tggtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCggg < 2:1212723/150‑1 (MQ=255) tggtggCAACGGTGATGAATTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGAATCAGGTTGGCTTTGGTAACAACGCGACCGCTCTTCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCggg < 2:787350/150‑1 (MQ=255) ggtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGga < 2:1751050/150‑1 (MQ=255) ggtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGga > 2:1988129/1‑150 (MQ=255) ggtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGga < 2:403827/150‑1 (MQ=255) ggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCCTCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCGCTG‑‑TGTTTTTTCGGGagaa > 2:1035534/1‑150 (MQ=255) aaCGGTGCTGCAGGTGACCAGACTGCATCTAACTCCTCCGGCAACGGGACTCCGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAgaagaa < 2:207869/150‑1 (MQ=255) ctgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAAt > 1:1103549/1‑150 (MQ=255) gcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGAAACAACGCGACCGCTCATCAGTACTAATACATCATGTGTATTACAGAAACAGGGCTCAAGCCCTG‑‑TTTGTATACTCGAGAACAATATGACTaa > 2:959319/1‑149 (MQ=255) cAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTAGGGAGAAGAATATGAATACg > 1:1253061/1‑150 (MQ=255) cAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATATGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACg < 1:856139/150‑1 (MQ=255) gTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGtt > 2:887855/1‑150 (MQ=255) gTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGtt < 1:1802430/150‑1 (MQ=255) ttGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAAAACGtta > 2:1950872/1‑150 (MQ=255) gACCAGACTGCATCTACCTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTACCAACGCGCCCGCTCATCAGTACTAATACATCATTTGTATTTCAGAAACAGGGCGCAAGCCCTG‑‑TGTTTTTTCGGGAGAAGAATATGAATACGttatt > 2:2107045/1‑150 (MQ=255) gACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGttatt > 2:628484/1‑150 (MQ=255) gACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGttatt < 1:1318136/150‑1 (MQ=255) gACCAGACTGCATCTAACTCCTCCGTCAAAGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCATG‑‑TTTTTTTTCGTGAGAAGAATATGAATACGttatt > 1:916544/1‑150 (MQ=255) aCTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCt > 1:1583832/1‑150 (MQ=255) tCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGc < 2:1064917/150‑1 (MQ=255) cTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCa > 2:540143/1‑150 (MQ=255) tgaCTCCTCCGTCAACGTGACTCAGGTTGGCTATGGTAACAACGCGACCGCTCATCAGTACTAATACATAATTTGTATTACAGAAACAGGGCTCAAGCCCTG‑‑TTATTTTTAGGGATCAGAATATGAATACGTTATTACTCATTGCGGCAc > 1:129128/3‑150 (MQ=255) tAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCAc > 1:881316/1‑150 (MQ=255) tAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCAc < 1:1525469/150‑1 (MQ=255) tAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCAc < 1:79566/150‑1 (MQ=255) aaCTCCTCCGTCAACGTGACTCAGGGTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTTTTACAGAAACAGGGCGCAAGCCCTG‑‑GTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCaat > 1:1776678/1‑148 (MQ=255) ctcctcCGTCAACGTGACTCAGGTTGGCTTTCGTAACAAGGCGACCGCTCATCAGTACTTATACATCATTTGTATTACAGAAACAGGGCGCAAGACCTG‑‑TTTTTTTTCGTGAGAACAATATGAAGACGTTATTACACCTTGCgcccattt > 2:1131922/1‑143 (MQ=255) cccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATCCATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAg < 1:1731189/149‑1 (MQ=255) accGTCCACGGGACCCCGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGACACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAg < 1:969687/149‑1 (MQ=255) ccGTCAACGTGACTCAGGTTGGCTTTGGAAACAACGCGACCGCTCATCAGTACAAATACATCATTTGTATAACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGt < 1:825375/150‑1 (MQ=255) tCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAg < 2:1764132/150‑1 (MQ=255) tCAACGTGACTCAGGTAGGCTTTGGTAACAACGCGACCGCTCATCAGTTATAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAg < 2:459676/150‑1 (MQ=255) cAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGa < 2:1856983/150‑1 (MQ=255) aaCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACATTATTAATCCTTGCGGCACTTTCCAGTCAGAt > 2:1774037/1‑150 (MQ=255) gACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCt > 2:671828/1‑150 (MQ=255) cTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCttt < 1:1064438/150‑1 (MQ=255) atctggTTGGCTTTGGTAAGAACGCGACCTCTCATCAGTACTTATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTGGGGAGAAGAATATGAATACGTTATTACTCCTTGCTGCACTTTCCAGTCAGATAACCttt < 1:1496928/146‑1 (MQ=255) gcAGGTGGGCTTTGGTTACATCGCGACCGCTCTTCAGTACAAATACAACATTTGTATTACAGTAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGTGAGAAGAATATGAATTCGTTATTACTCCTTGCGGCACTTTCGAGTCAGATAACCTTTa < 1:212348/149‑1 (MQ=255) tggTTGGCTTTGTTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACATGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAAt < 1:725032/149‑1 (MQ=255) ggTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATa < 2:939036/150‑1 (MQ=255) ggTTGGCTTTGGTAACAACGCGACAGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATa > 2:1587273/1‑150 (MQ=255) ttGGCTTTGGGAACCACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACACGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACg < 2:221633/150‑1 (MQ=255) ttGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAg < 2:2032725/150‑1 (MQ=255) tGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGc < 2:1671639/150‑1 (MQ=255) tAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAg > 2:1544854/1‑150 (MQ=255) acaacGCGTACTCTCATCATTACTAATACTTCATTTGTATTACAGAAACAGGGCGCAAGCCCTGTTTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAg < 2:180072/150‑1 (MQ=255) acaacGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAggg < 2:302322/150‑1 (MQ=255) acaacGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAggg > 1:983654/1‑150 (MQ=255) aacGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGa < 2:1483369/150‑1 (MQ=255) aacGCGACCGCTCATCAGTACTAATAAATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGa > 1:1399400/1‑150 (MQ=255) acGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAt < 2:1303157/150‑1 (MQ=255) cgcgACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtg < 2:968958/150‑1 (MQ=255) cgACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtgtg < 2:569634/150‑1 (MQ=255) cgACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAtgtg < 2:1787311/150‑1 (MQ=255) aCCGGTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGACACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGta < 1:1613728/150‑1 (MQ=255) cGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGtata < 2:1926733/150‑1 (MQ=255) gCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATAc < 1:1988129/150‑1 (MQ=255) tcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCatta < 1:2154218/150‑1 (MQ=255) caGTACTAATACATCATATGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCattat < 1:463073/150‑1 (MQ=255) aCTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCt > 1:2010340/1‑150 (MQ=255) cTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTg > 1:514791/1‑150 (MQ=255) cTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTg > 1:1874602/1‑150 (MQ=255) tAATACATCATTTGTATTACAGAAACAGGGAGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTGCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGa < 2:1037743/150‑1 (MQ=255) aaTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACACAGCAAGGGGATGTGTATACGATTATTCCTGaa > 2:1324624/1‑150 (MQ=255) aTACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAg < 1:800818/150‑1 (MQ=255) atcatTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCAc < 1:1817484/150‑1 (MQ=255) atcatTTGTATTACAGAAACAGGGCGAAAGCCCTT‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCATTCAGATAACCTTTTATACGACCCAGCCAGGGGATGTGTATACCATTATTCCTGAAGTCAc < 2:1487815/150‑1 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATATCCTTTAATACGACCCATCAAGGGGATGTGTATAACATTATTCCTGAAGTCAct > 2:94092/1‑150 (MQ=255) atTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCActct < 2:514791/150‑1 (MQ=255) cgaaaaaaaaCAGGGCTTGCGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTGTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCa > 2:933326/8‑150 (MQ=255) aTTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGTATGTGTATACCATTATTCCTGAAGTCACTCTTAATCa > 1:1551199/1‑150 (MQ=255) aTTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCa > 1:628017/1‑150 (MQ=255) ttACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCaa > 1:2136941/1‑150 (MQ=255) aaaaaaaCAGGGCTTGCGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATc > 2:147006/5‑150 (MQ=255) aCAGAAACAGGGCTAAAGCCATG‑‑TTTTTTTTCGGGAGAAGAATCTGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCAAGCAAGGGGTTGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATc < 1:959319/150‑1 (MQ=255) gAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTg < 2:1283675/150‑1 (MQ=255) aaCACGGCGCAAGCCCTT‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTAGTACTCCTTGCGGCACTTTCCAGTCAGATACCCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTc < 2:350149/150‑1 (MQ=255) aCAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCt < 2:881316/150‑1 (MQ=255) cAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATGCGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCtg < 2:1646460/150‑1 (MQ=255) cAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCtg > 1:631141/1‑150 (MQ=255) ggCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGc > 1:2073854/1‑150 (MQ=255) gcAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTTTCTGTGCaga > 1:194295/1‑150 (MQ=255) cAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCagag < 2:2020111/150‑1 (MQ=255) | TGACGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCCTG‑‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCAGAG > NC_000913/1104784‑1105081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |