| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4096861 = | 169 (1.330) | 7 (0.060) | 6/284 | 10.6 | 4.0% | coding (588/1470 nt) | rhaB | rhamnulokinase |
| ? | NC_000913 | 4096886 = | 173 (1.430) | coding (563/1470 nt) | rhaB | rhamnulokinase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAGCAACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAGTCGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4097016‑4096861‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgctaTTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTG > NC_000913/4096886‑4097034 GAGCAACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAG > 1:544319/1‑150GAGCAACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACAGGGACGAG > 1:1787345/1‑150 GCAACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCATGACCGGCAAGATGAACTGGGAATATACAAACGCCACGACCACGCAACTGGTCAATATAAATAGCGACTACTGGGACGAGTC > 1:919883/1‑150 CAACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAGTCG > 1:1602127/1‑150 CAACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAGTCG < 2:1843383/150‑1 CAACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAGTCG < 1:834393/150‑1 AACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAGTCGC > 1:13884/1‑150 AACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAGTCGC < 2:364382/150‑1 AACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAGTCGC > 1:172984/1‑150 AACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAGTCGC < 2:1497450/150‑1 ACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTCCCCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAGTCGCT > 1:246718/1‑150 CAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAGTCGCTA < 1:1833103/150‑1 CTGGTCAATATCAATAGCGACGACTGGGACGAGTCGCTATTGATATTGACCAGTTGCGGGGTCGTGGCGTTGGTATATTACCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGGAATGAGTGGA > 2:1888281/1‑150 TGGTCAATATCAATAGCGACGACTGGGACGAGTCGCTATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAA > 1:785153/1‑150 AATATCAATAGCGACGACTGGGACGAGTCGCTATTGATATTGACAAGTTGCGTGGTCGAGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGT > 2:787854/1‑150 AATAGCGACGACTGGGACGAGTCGCTATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGT > 2:1280369/1‑150 ATAGCGACGACTGGGACGAGTCGCTTTTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTT > 1:363167/1‑150 ATAGCGACGACTGGGACGAGTCGCTATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTT > 2:1959653/1‑150 GCGACGACTGGGACGAGTCGCTATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGCGCAATGTGTGGAATAAGTTCAGGTTGTT > 2:336147/1‑150 GTCGCTATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACG < 2:2014987/150‑1 CGCTATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCA < 2:1745015/150‑1 CGCTATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCA < 2:589419/150‑1 CGCTATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCA < 2:268843/150‑1 CGCTATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACAGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGGGGAATAAGTTCAGGTAGTTGCTCCGTCCGCGCACGCA > 2:1855384/1‑150 GCTATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAA > 2:5015/1‑150 GCTATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAA > 1:1360080/1‑150 gTATTGATATTGACCGGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTTAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAAC < 2:1761064/149‑1 aTATTGATATTGACAGGTTGCGTGGGCGTGGCGTTTGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAAC < 2:1753526/149‑1 CTATTGATATTGTCCAGTTGCGTGGTCGTGGCGGTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAAC < 2:374809/150‑1 TATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACT < 2:1832953/150‑1 TATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACT < 2:564416/150‑1 TATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCACAGTTCATCTTGCCGGTGAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTAAGGTTGTTGCTCCGTAAGCGCACGCAACT > 1:48356/1‑150 ATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCTGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTG < 2:1776172/150‑1 ATTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTG < 1:1503663/150‑1 GAGCAACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAGTCGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4097016‑4096861‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgctaTTGATATTGACCAGTTGCGTGGTCGTGGCGTTGGTATATTCCCAGTTCATCTTGCCGGTCAGGCGATAACTGAAGTAATCCGGCATCAGCAGAGCGTGAGCAATGTGTGGAATAAGTTCAGGTTGTTGCTCCGTCAGCGCACGCAACTG > NC_000913/4096886‑4097034 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |