Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,470,435 T→A 7.0% N435K (AAT→AAA gtrS → serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,470,4350TA 7.0% 1807.4 / 20.2 577N435K (AAT→AAAgtrSserotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage
Reads supporting (aligned to +/- strand):  ref base T (214/306);  new base A (55/2);  total (269/308)
Fisher's exact test for biased strand distribution p-value = 1.27e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 595 total aligned reads displayed.

TCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCG  >  NC_000913/2470286‑2470584
                                                                                                                                                     |                                                                                                                                                     
tctcTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAAt                                                                                                                                                       <  2:6069869/150‑1 (MQ=255)
  tctTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCaaataaataa                                                                                                                                                     >  2:14225072/1‑148 (MQ=255)
   ctTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCaa                                                                                                                                                    <  1:1909078/150‑1 (MQ=255)
   ctTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCaa                                                                                                                                                    <  1:15108241/150‑1 (MQ=255)
              aacacAATTTTATGTCACAATATTCGCCCAAGCATATAGACAATTAAGCAAGCATTTATTTGGAATCAAAATTACGTTCGACCATTCCTTATACATAACAGTCGATTTTTAAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGa                                                                                                                                         <  2:5310258/146‑1 (MQ=255)
               tctcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGAt                                                                                                                                        <  2:3704202/150‑1 (MQ=255)
               tctcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGATTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGAt                                                                                                                                        <  1:5846523/150‑1 (MQ=255)
                 tcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTAAAAAAAAATACAAAGAAAAAAAGACAAAACCGaggg                                                                                                                                      >  2:13045617/1‑147 (MQ=255)
                   aaTTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTaa                                                                                                                                    <  1:11589323/150‑1 (MQ=255)
                       ttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCa                                                                                                                                <  1:4146608/150‑1 (MQ=255)
                       ttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCa                                                                                                                                <  1:14744085/150‑1 (MQ=255)
                            tgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAg                                                                                                                           <  2:4601665/150‑1 (MQ=255)
                            tgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGAAAAAAGCGATTTAAAGCACTAAg                                                                                                                           >  2:10376079/1‑150 (MQ=255)
                            tgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAAGAAATAAAGAAAATATCGATGTAAAGCACTaat                                                                                                                           >  2:2067489/1‑149 (MQ=255)
                            tgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTAAATTAAAAAAAAAAAAAAACAAAACAACACAAAAACGATCTAAACCACaaac                                                                                                                           >  2:10522843/1‑149 (MQ=255)
                              tCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGtt                                                                                                                         <  2:7366292/150‑1 (MQ=255)
                              tCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATAAAGACAAAAGCGATGTAAAGCACTAAGtt                                                                                                                         >  2:5003492/1‑150 (MQ=255)
                              tCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAGATATAAAGCACaaaaat                                                                                                                         >  1:3480623/1‑147 (MQ=255)
                                aTTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAAATAAAAAAAAAAAAGAAAAAAGCGATGGAAAGGACGAAGTTTa                                                                                                                       >  1:265717/1‑150 (MQ=255)
                                aTTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAAATTATAAAATAATTAAAAGAAATAAAGAAAAAAGCGAATTAAAGCAATAATTTTa                                                                                                                       >  2:14532129/1‑150 (MQ=255)
                                  ttttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTaaa                                                                                                                     <  1:2110752/150‑1 (MQ=255)
                                     tCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTg                                                                                                                  <  1:3664114/150‑1 (MQ=255)
                                      cGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgc                                                                                                                 <  1:4748166/150‑1 (MQ=255)
                                        gggAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgc                                                                                                               <  2:665323/150‑1 (MQ=255)
                                         ggAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgcg                                                                                                              <  1:8681430/150‑1 (MQ=255)
                                         ggAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACGAATTTTATATTgcgcg                                                                                                              >  2:11567879/1‑150 (MQ=255)
                                          gAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATAAAGACAATATCGATGTAAAGCACTAAGTTTAAATTgcgcgc                                                                                                             >  2:7889153/1‑150 (MQ=255)
                                             ggATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAAATAAAATAAAAAAAGACAAAAACCAAGTAAAACAAAAAGTTTAAAATTAGCGccca                                                                                                          >  1:12016165/1‑148 (MQ=255)
                                                tataGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCatgat                                                                                                       <  2:5558757/150‑5 (MQ=255)
                                                 ataGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCAt                                                                                                      <  1:2911015/150‑1 (MQ=255)
                                                        tttAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTAATTTTTAAAATAAATAAAATAAAAAAAAAAAAAAACGATTTAAAGCACTAAGTTTAAAATTAGCGCCCAACAGTgcgcgc                                                                                               >  1:302506/1‑150 (MQ=255)
                                                           aagaaagaATTTTTTTTTAATTTTTTTTTGTTTCGACCTTTTCTTTTAATTAAAAGTCTTTTTTTTAATTTATAAAATAATTCAAATAAATCATGAAAATAGCGATGTAAAGCAATATGTTTAATTTGCGCGCCATGATTGGCGCGcaat                                                                                            <  1:10360216/150‑3 (MQ=255)
                                                             tcaagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAg                                                                                          <  2:10730877/149‑1 (MQ=255)
                                                             gcaagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAg                                                                                          <  2:11162163/150‑1 (MQ=255)
                                                              caagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAAACAATACAATATCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGc                                                                                         >  2:15420343/1‑150 (MQ=255)
                                                              caagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAAAAAAAAAAAATAAAAAAAATAGAGATTTAAAGCAATAAATTTAAATTTAGCGCCCAAAAAGGCGCGCACaaac                                                                                         >  1:15224876/1‑148 (MQ=255)
                                                               gggcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAAATCAAATAAAACAAGACAAATGCGCTGTAAAGCACAAAGTTTAAAATGCGCGCCCAAGATGGGGCGCCCCAGcg                                                                                        >  2:14860444/3‑149 (MQ=255)
                                                               aagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTTTAAAAAAAATAAAAAAAAAAAAAAAAAAAAAGATGTAAATAAAAAAATTTAAAATTATGGCCAATCAAGGCCCGCACAAGca                                                                                        >  1:4536537/1‑149 (MQ=255)
                                                               aagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTATAAAAAAATTAAAAAAAAAAAAAAAAAAATAGAAGTAAAGCAAAAAATTTAAATTTAGCGCCCATACAGGAGCGCACaaaca                                                                                        >  1:6008511/1‑147 (MQ=255)
                                                               aagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAAGAAATCAAGACAAAATCGATGTAAATCACTAAGTTTAAATTTCGCGCCAATCATGGCGCGCACAAGcg                                                                                        >  2:9443262/1‑149 (MQ=255)
                                                                 gcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTaaa                                                                                                                     >  2:8175409/1‑119 (MQ=255)
                                                                   atttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTataa                                                                                    <  2:13319272/150‑1 (MQ=255)
                                                                        tttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCa                                                                               <  2:4515180/150‑1 (MQ=255)
                                                                          tGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTAAAAAATAATTCAAAGAAATAAAGACAAAAGCCTTGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAAc                                                                             >  2:3330717/1‑150 (MQ=255)
                                                                           ggAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAAGAAATAAAGACAATAGCGATGTAAAGCACTAAGTTTAAAATTCGCGCCAATCATGGCGCGCACAAGCTATAATAACaaac                                                                            >  2:6457219/1‑148 (MQ=255)
                                                                            gAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAAATTATAAAAAAAATAAAAGAAATAAAGACAAAATCGATTTAAAACACTAAGTTTAAATTTCGCCCCAAACAAGGCGCCCCCAACCAAAAAAACCaaaca                                                                           >  2:7186644/1‑147 (MQ=255)
                                                                                 tATTTTTCTTTCGACCTTTGCTTATAAATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCAATAATTTTAAATGGCGCGCCAATCTTGGCGCGCACAAGCTATAATACCAACCTAAttt                                                                      <  1:7215875/150‑1 (MQ=255)
                                                                                 tATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAATTAAAAGAAATAAAGAAAAAAGAGATTTAAAGCAAAAAATTTAAAATTAGCGCCAAAAAAGGCGCCCACAACCTATAATAACAAACTAAatt                                                                      >  2:3984194/1‑150 (MQ=255)
                                                                                   tttttCTTTCGACCTTTGATTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTAAAAGAAATAAAGAAAATAGCGTTGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtct                                                                    <  1:11349234/150‑1 (MQ=255)
                                                                                    ttttCGTTCTACCTTTGCTTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtctc                                                                   <  1:11151596/150‑1 (MQ=255)
                                                                                          ttcgACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAAGAAAAAAAGAAAAAAGCGATGTAAAGCACGAAGTTTAAATTTCGCGCCAATCAAGGCGCGCACAAGCAATAATAACAAACTAATTTatccaccac                                                             >  2:4367292/1‑148 (MQ=255)
                                                                                               ccTTTGCTTATACATAACATTCGTTTTTTTAATTTATAAAATAATTAAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTaga                                                        <  1:15345925/150‑1 (MQ=255)
                                                                                                 tttGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGt                                                      <  2:2723247/150‑1 (MQ=255)
                                                                                                   tgattATAAATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAACAAATCAAGACAATAGCGATTTAAAGCAATAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGa                                                    <  1:6867115/147‑1 (MQ=255)
                                                                                                      ttATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAATAAATAAATACAATATCGATTTAAATCACTAAGTTTAAATTTAGCGCCAATCATTGCGCGCACAAGCTATAATAACAAACTAATTTATACTACTCTTATAGTGACta                                                 >  2:15230926/1‑150 (MQ=255)
                                                                                                      ttATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAAGAAATCAAGAAAATAGCGCTGTAAAGCACGAACTTTAAATTGCGCGCCAATCAAGGCGCGCACAAGCTATAATACCAACCTAATTTATCCTCCTCTTAGAGTGACta                                                 >  2:474432/1‑150 (MQ=255)
                                                                                                          aCATAACAGTCGTTTTTTTAATTTATAAAATAAATAAAAGAAATCAAGAAAATAGCGATGTAAAGCACTAAGTTTAAATTTCGCGCCAATCATGGCGCGCACAAGCTATAATACCAAACAAATTTCTCCTCCTCTTTGTGTGACTATAtc                                             >  2:12432122/1‑150 (MQ=255)
                                                                                                           cATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATAtct                                            <  1:1368022/150‑1 (MQ=255)
                                                                                                            aTAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAAAGCGATGTAAAGCACTAAGTTTAAATTGCCCGCCAATCATGGCGCGCACAAGCGATAATACCAACCTAATTTCTCCTCCGCGTAGAGTGACTATAtcgc                                           >  2:8891126/1‑148 (MQ=255)
                                                                                                             tAACATTCGTTTTTTTTATTTATAAAATAATTCAAAGAAATAAAGACAATAGCTTTTTAAAGAACTAAGTTTAATTTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTGCTCTTAGAGTGACTATATCTcc                                          <  2:4661283/150‑1 (MQ=255)
                                                                                                                cAGTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGa                                       <  1:7163196/150‑1 (MQ=255)
                                                                                                                  gTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATa                                     <  1:13816522/150‑1 (MQ=255)
                                                                                                                      tttttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcctcc                                                               <  2:9560822/120‑1 (MQ=255)
                                                                                                                      tttttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcctcc                                                               >  1:9560822/1‑120 (MQ=255)
                                                                                                                         atatAATTTATAAAATAATTCAAAGAAAACAAGACAATAGCGAAGAACACCACTACGTATAAATTGCGCGACACTCCTGCCGCCCACAAGCTATAATACCAACCAAATTACTCCACCTCTTACAGTGACTATATCTCCTCATAGAATTGc                              >  1:10014881/4‑150 (MQ=255)
                                                                                                                          tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                             <  2:6958494/150‑1 (MQ=255)
                                                                                                                            tAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                             <  1:2202756/148‑1 (MQ=255)
                                                                                                                            tAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                             >  2:2202756/1‑148 (MQ=255)
                                                                                                                              aTTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAt                         >  2:11389453/1‑150 (MQ=255)
                                                                                                                              aTTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAt                         >  1:12737626/1‑150 (MQ=255)
                                                                                                                               tttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                        <  2:9752952/150‑1 (MQ=255)
                                                                                                                               tttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                        >  1:9165220/1‑150 (MQ=255)
                                                                                                                               tttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                        <  2:13784073/150‑1 (MQ=255)
                                                                                                                                 tataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGa                      <  2:3001584/150‑1 (MQ=255)
                                                                                                                                 tataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGa                      <  1:8978951/150‑1 (MQ=255)
                                                                                                                                 tataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGa                      <  2:9088200/150‑1 (MQ=255)
                                                                                                                                   taAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACt                    <  2:5859400/150‑1 (MQ=255)
                                                                                                                                   taAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACt                    >  2:1102205/1‑150 (MQ=255)
                                                                                                                                     aaaTAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTAt                  <  2:12665525/150‑1 (MQ=255)
                                                                                                                                     aaaTAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTAt                  >  2:12140778/1‑150 (MQ=255)
                                                                                                                                      aataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTACAGGGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTTACTATATCTCCTGATAGAATTGCGGTATTGACTATc                 <  2:8272626/150‑1 (MQ=255)
                                                                                                                                      aataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAGTCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCATGATATAATTGCGGTATTGACTATc                 >  1:3242247/1‑150 (MQ=255)
                                                                                                                                      aataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATc                 <  1:9956088/150‑1 (MQ=255)
                                                                                                                                       ataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCa                <  1:1411721/150‑1 (MQ=255)
                                                                                                                                        taatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCaa               <  2:8602301/150‑1 (MQ=255)
                                                                                                                                         aatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCaaa              <  1:7538238/150‑1 (MQ=255)
                                                                                                                                          atTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAAt             <  1:13039137/150‑1 (MQ=255)
                                                                                                                                           ttCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATg            >  2:2379913/1‑150 (MQ=255)
                                                                                                                                           ttCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATg            >  1:1234296/1‑150 (MQ=255)
                                                                                                                                             cAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGcc          <  2:3604412/150‑1 (MQ=255)
                                                                                                                                              aaaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCATATGgcc         >  2:11713987/1‑150 (MQ=255)
                                                                                                                                              aaaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGccc         >  2:1578922/1‑150 (MQ=255)
                                                                                                                                              aaaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGccc         >  1:14375189/1‑150 (MQ=255)
                                                                                                                                               aaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCt        >  1:8298207/1‑150 (MQ=255)
                                                                                                                                               aaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCt        >  1:6399429/1‑150 (MQ=255)
                                                                                                                                                aGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAAttt                                                                      >  1:10802468/1‑87 (MQ=255)
                                                                                                                                                 gAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGa      <  2:13959173/150‑1 (MQ=255)
                                                                                                                                                    aTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTc   <  1:15556750/150‑1 (MQ=255)
                                                                                                                                                     tCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCg  >  1:5291319/1‑150 (MQ=255)
                                                                                                                                                     tCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCg  >  1:7896097/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCG  >  NC_000913/2470286‑2470584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: