| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 281,969 | C→A | 5.6% | M5I (ATG→ATT) | yagA ← | CP4‑6 prophage; putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 281,969 | 0 | C | A | 5.6% | 2591.4 / 12.4 | 802 | M5I (ATG→ATT) | yagA | CP4‑6 prophage; putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (452/273); new base A (5/72); total (457/345) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.53e-23 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 814 total aligned reads displayed.
CCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTCGCCCCTTTGGGGA > NC_000913/281820‑282118 | ccTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGc > 2:4219567/1‑150 (MQ=255) cTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCa > 1:8674456/1‑150 (MQ=255) ttCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCAt > 2:12940401/1‑150 (MQ=255) ccTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATaa < 1:13787516/150‑1 (MQ=255) cTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAg > 2:11194863/1‑150 (MQ=255) cccAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACt > 1:11064169/1‑150 (MQ=255) cccAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACt < 2:9263834/150‑1 (MQ=255) cgcTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATa > 1:2875734/1‑150 (MQ=255) cgcTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATa > 2:5747522/1‑150 (MQ=255) gcTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATaa > 1:10142508/1‑150 (MQ=255) gAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGTATTTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACTTGTTATCTCTCGAATCCCTGGGCATAAGCGACTCCATAAACgg < 2:9754910/150‑1 (MQ=255) gAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACgg > 2:3719573/1‑150 (MQ=255) aGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACggg > 1:7245212/1‑150 (MQ=255) gCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGt > 2:2590276/1‑150 (MQ=255) ccACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGtt > 2:2758102/1‑150 (MQ=255) cacgttGTAGCGGGTGGCTGGTGAACTGCCGACGGTACGGCAGAGGGACCGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAAATAAGTCAGTAGTTATTTACTTGGTTTGTCTCGCCTCCCAGGGCATAAGCGACTCCATAAACGGGtt < 2:14950576/146‑1 (MQ=255) aCTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCAATAAACGGGTTCt > 1:4514656/1‑150 (MQ=255) ttGTAGCGGGTGGCAGGTTAATTGCCGACGCGAGGGCAGTGGGAACGGATGTTCGCCCCGTCCTGCGTGGCGAACAAAAAAAACTCCGTACGTAATGACCTGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTa < 2:6974381/150‑1 (MQ=255) gTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATg > 1:14135392/1‑150 (MQ=255) aGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGcc > 2:7370924/1‑150 (MQ=255) gTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGt > 1:9217735/1‑150 (MQ=255) gctggTTAAATGCCGACGCGACGGCAGTGGGAAGGGATGTTCGCCCCGTCCTGCGAGGCTAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGt < 2:4840504/147‑1 (MQ=255) aGGTGAAATGCCTAAGCGAGGGCAGAGGGAAGGTTTGTTCGCCCCGTCCTGCTAGGCGAAAAAAACAAACTCTGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTaa < 2:4467219/150‑1 (MQ=255) ggTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAg > 1:1190660/1‑150 (MQ=255) ggTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAg > 1:5100737/1‑150 (MQ=255) ggTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAg > 1:8198586/1‑150 (MQ=255) gTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAgt > 2:8865782/1‑150 (MQ=255) gTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAgt > 1:10283409/1‑150 (MQ=255) gAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAgtgt > 1:1618176/1‑150 (MQ=255) tGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTAc > 2:5555878/1‑150 (MQ=255) tGCCGAAGCGACGGATGTGGGACCGGTTGTTCGCCCCGTCCTGCGTGGCTAAAAAAACAACATCAGTCCTTAATGACTTGTTATCCCTCGCACCCCTGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTAc < 1:3206979/150‑1 (MQ=255) gCCGAAGCGACGGCAGAGGGAAGGGATGTTCGCCCCGTCCTGTGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCTGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTAcc < 2:1199453/150‑1 (MQ=255) gCCGAAGCGACGGCAGAGGGAACGGTTGTGCGCCCCGTCCTGCGAGGCTAACAAAACAAACGCTGTACTTATTGACTTGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTAcc < 2:13433959/150‑1 (MQ=255) ccGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCa > 2:9856336/1‑150 (MQ=255) ccGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCa > 1:2241501/1‑150 (MQ=255) gCGACGGCAGCGGGAACGGATGTTCGCCCCGGCCTGCGAGGCGAACAAAACAAACTCAGTACTTAATGACATGTTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTATGTGTCTACCATGTcc < 2:15202374/150‑1 (MQ=255) cGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGa > 2:6381121/1‑150 (MQ=255) ggCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGaa > 1:5913505/1‑150 (MQ=255) cAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACa > 1:3948001/1‑150 (MQ=255) agagGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACaa > 2:6018649/1‑150 (MQ=255) agagGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACaa > 1:14958870/1‑150 (MQ=255) tgggAAGGGTTGTTCGCCCCGTCCTGCGTGGCGAACAAAAAAAACCCCGTACTTAATGACATGGTATCTCTCGCATCCCTGGGCATACGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAgt < 1:4881099/149‑1 (MQ=255) ggAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAgtgt > 2:3116682/1‑150 (MQ=255) accGGTTGTGCGCCCCGTCCGGCGGGGCTAACAAAAAAAACTCTGTAGGTATTGACTGGGTATCTCGCGCATCCCCGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTc < 1:6414540/148‑1 (MQ=255) aaCGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTc < 2:9111713/150‑1 (MQ=255) aaCGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCGTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTc > 1:6847559/1‑150 (MQ=255) aCGTATGTTCGCCCCGACCTGCGAGGCTAAAAAAACAAACTCAGTACGTAATGACATGTTATCTCTCGCACCCCAGGGAATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCa < 1:13000871/150‑1 (MQ=255) cGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCAc > 2:8008323/1‑150 (MQ=255) ggATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAAGGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCGTGTCCCCGAACTAGTGTTCACt > 2:11875086/1‑150 (MQ=255) tCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTcc > 2:671401/1‑150 (MQ=255) tCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTcc > 1:10554033/1‑150 (MQ=255) tCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTcc > 2:12491226/1‑150 (MQ=255) cGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTccc < 2:5054685/150‑1 (MQ=255) gCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTcccc < 2:11520869/150‑1 (MQ=255) cccGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCgg > 1:11469352/1‑150 (MQ=255) cGTCCTGCGAGGCGAACAAAAAAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGAATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGAc < 2:1944581/150‑1 (MQ=255) gTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGAcc > 1:1910660/1‑150 (MQ=255) tCCGGCGAGGCTAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCACCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCg < 2:9442172/150‑1 (MQ=255) tgctatccGAAAAAAAAAAACTCAGTACGTAATGAAATGGAATATCTCGAAACCAAGGCAAAAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTac < 1:15167860/143‑1 (MQ=255) aGGCTAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCC < 2:14301030‑M1/150‑1 (MQ=255) aacaaaacaaACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑G > 2:774260‑M1/1‑150 (MQ=255) aaaacaaaCTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGG > 2:2921601‑M1/1‑150 (MQ=255) aaacaaacTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGga > 2:10534053/1‑150 (MQ=255) aacaaacTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGgag > 2:3937734/1‑150 (MQ=255) caaacCCAGTACGTAATGACATGGTATCACTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGagag < 1:11680327/150‑1 (MQ=255) aaacTCAGTACGTATTGACATGGTATCTCTCGCATCCCCGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAgg < 1:9791661/150‑1 (MQ=255) tCAGTACGTAATGACGTGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGAc > 1:12527384/1‑150 (MQ=255) tCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAAGGGGGAGAGGGGa > 1:11292697/1‑150 (MQ=255) tCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGAc > 1:8981449/1‑150 (MQ=255) cccgTACGTAATGACCTGTTATCTCTCGCATCCCCGGGCAAACGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGAc < 2:1454767/147‑1 (MQ=255) aGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTg > 1:751890/1‑150 (MQ=255) tAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAggg > 1:362704/1‑139 (MQ=255) tGACAGGGTATCTCCCGCAGCCCAGGGCTTAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGcc < 2:4143886/150‑1 (MQ=255) aCATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCAt < 2:2326189/150‑1 (MQ=255) aCATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCAt > 2:14003385/1‑150 (MQ=255) aTGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCt < 1:3719573/150‑1 (MQ=255) ggTATCTCTCGCATCCCTGGGAATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCttt < 1:15291460/150‑1 (MQ=255) ggTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAACCGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCttt < 2:15436005/150‑1 (MQ=255) ggTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGtt > 1:7909374/1‑91 (MQ=255) gTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCtttt > 2:10790449/1‑150 (MQ=255) gTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCtttt > 1:13506992/1‑150 (MQ=255) tATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTc > 2:13646448/1‑150 (MQ=255) tctcGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTccccc > 1:10722786/1‑150 (MQ=255) tctcGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTccccc > 2:528061/1‑150 (MQ=255) ctcGCCTCCCCGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCt < 1:5763631/150‑1 (MQ=255) ctcGCATCCCTGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCt < 2:11064169/150‑1 (MQ=255) tcGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTc > 1:4652815/1‑150 (MQ=255) tcGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTc > 1:2538558/1‑150 (MQ=255) tcGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTAGGCCGTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTc > 1:9482784/1‑150 (MQ=255) aTCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTCGccc > 2:2073322‑M2/1‑147 (MQ=255) ccAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTCGcccctt < 1:12174147‑M2/150‑7 (MQ=255) cAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTCGccccttt < 1:7018788‑M2/150‑8 (MQ=255) cAGGGAATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTCGccccttt > 2:859866‑M2/1‑143 (MQ=255) aGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTCGcccctttg > 1:12699790‑M2/1‑142 (MQ=255) aGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTCGcccctttg < 1:14588684‑M2/150‑9 (MQ=255) gggCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCCAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTCGcccctttgg > 2:8185438‑M2/1‑141 (MQ=255) gggCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTCGcccctttgg > 2:1623305‑M2/1‑141 (MQ=255) ggCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTCGcccctttggg > 2:6532316‑M2/1‑140 (MQ=255) gCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTCGcccctttgggg < 1:547484‑M2/150‑12 (MQ=255) cATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTCGCCCCTTTGGGga < 1:9050545/150‑1 (MQ=255) | CCTTCCTGAGCCCAGCGCTGGAGCCACTTGTAGCCGGTGGCAGGTGAAATGCCGAAGCGACGGCAGAGGGAACGGATGTTCGCCCCGTCCTGCGAGGCGAACAAAACAAACTCAGTACGTAATGACATGGTATCTCTCGCATCCCAGGGCATAAGCGACTCCATAAACGGGTTCTTATGCCTTAGTTGTAAGTGTCTACCATGTCCCCGAACAAGTGTTCACTATGTCCCCGGACCGTACACCCCAAA‑GGGGAGAGGGGACTGCACCGAGCCATCTTTTCCCCCTCGCCCCTTTGGGGA > NC_000913/281820‑282118 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |