New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4096011 =166 (0.970)3 (0.020) 3/266 NT 2.0% coding (1438/1470 nt) rhaB rhamnulokinase
?NC_000913 4096045 = 140 (0.850)coding (1404/1470 nt) rhaB rhamnulokinase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 185 total aligned reads displayed.

GCCAGCAGTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGA  >  NC_000913/4095862‑4096157
                                                                                                                                                     |                                                                                                                                                  
ttcgggtgatcgccgggcctgttgaagcctcgacgctcggcaatatcggcatccagttaatgacgctggatgaactcaacaatgtggatgatttccgtcaggtcgtcagcaccaccgcgaatctgaccacctttacccctaatcctgaca                                                                                                                                                    <  2:1136262‑M1/1‑1 (MQ=255)
gCCAGCAGTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTaga                                                                                                                                                    <  2:666050/150‑1 (MQ=255)
 ccAGCAGTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTagag                                                                                                                                                   >  2:2199315/1‑150 (MQ=255)
    ggtgatcgccgggcctgttgaagcctcgacgctcggcaatatcggcatccagttaatgacgctggatgaactcaacaatgtggatgatttccgtcaggtcgtcagcaccaccgcgaatctgaccacctttacccctaatcctgacAGTGa                                                                                                                                                <  2:2763671‑M1/5‑1 (MQ=255)
    gcagTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGa                                                                                                                                                <  2:243676/150‑1 (MQ=255)
     gtgatcgccgggcctgttgaagcctcgacgctcggcaatatcggcatccagttaatgacgctggatgaactcaacaatgtggatgatttccgtcaggtcgtcagcaccaccgcgaatctgaccacctttacccctaatcctgacAGTGaa                                                                                                                                               <  2:2694781‑M1/6‑1 (MQ=255)
     gtgatcgccgggcctgtcgaagcctcgacgctcggcaatatcggcatccagttaatgacgctggatgaactcaacaatgtggatgatttccgtcaggtcgtcagcaccaccgcgaatctgaccacctttacccctaatcctgacAGTGaa                                                                                                                                               <  2:1593352‑M1/6‑1 (MQ=255)
      agTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAAt                                                                                                                                              <  1:687182/150‑1 (MQ=255)
      agTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGGTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAAt                                                                                                                                              <  2:513164/150‑1 (MQ=255)
           aTTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTgcg                                                                                                                                         >  2:2576493/1‑150 (MQ=255)
            ttGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTgcgc                                                                                                                                        <  2:1190158/150‑1 (MQ=255)
            ttGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTgcgc                                                                                                                                        <  2:238255/150‑1 (MQ=255)
            ttGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCACAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTgcgc                                                                                                                                        >  1:2763671/1‑150 (MQ=255)
            ttGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGGTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTgcgc                                                                                                                                        <  1:90679/150‑1 (MQ=255)
              gAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTGTGTCTGTCGTGTAGAGTGAATCTGCGCca                                                                                                                                      >  2:1156030/1‑150 (MQ=255)
              gAAACGGGTAAACAATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCca                                                                                                                                      <  2:725538/150‑1 (MQ=255)
               aaaCGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCcac                                                                                                                                     >  2:1305585/1‑150 (MQ=255)
               aaaCGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCcac                                                                                                                                     >  1:527456/1‑150 (MQ=255)
                aaCGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCcaca                                                                                                                                    >  2:407043/1‑150 (MQ=255)
                aaCGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCcaca                                                                                                                                    >  1:2025745/1‑150 (MQ=255)
                  cGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATa                                                                                                                                  >  1:1043220/1‑150 (MQ=255)
                   gggTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAg                                                                                                                                 >  1:1126348/1‑150 (MQ=255)
                     gTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTg                                                                                                                               <  1:215703/150‑1 (MQ=255)
                     gTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTg                                                                                                                               <  1:1416563/150‑1 (MQ=255)
                      tAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTgg                                                                                                                              >  2:86986/1‑150 (MQ=255)
                      tAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTgg                                                                                                                              <  2:2879704/150‑1 (MQ=255)
                             tcgacgctcggcaatatcggcatccagttaatgacgctggatgaactcaacaatgtggatgatttccgtcaggtcgtcagcaccaccgcgaatctgaccacctttacccctaatcctgacAGTGAAATTGCGCCACATAGTGGGCAAttt                                                                                                                       >  2:383991‑M1/121‑150 (MQ=255)
                             tCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGACTCTGCGCCACATAGTGGGCAAttt                                                                                                                       >  1:2569056/1‑150 (MQ=255)
                             tCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAAttt                                                                                                                       <  2:2214136/150‑1 (MQ=255)
                               aaGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCa                                                                                                                     <  2:1481102/150‑1 (MQ=255)
                                  ttGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTg                                                                                                                  >  2:1985023/1‑150 (MQ=255)
                                     gcgcAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCa                                                                                                                     >  1:2508358/1‑144 (MQ=255)
                                       gcAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAgg                                                                                                             >  2:2737799/1‑150 (MQ=255)
                                       gcAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAgg                                                                                                             >  2:1315352/1‑150 (MQ=255)
                                       gcAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAgg                                                                                                             >  2:2803498/1‑150 (MQ=255)
                                       gcAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTGTCGCTCGCTCCCAGGCCGGGTCCCGGTGAGTGGTCATGCGCAAAGCTCCGGTGTCTGTCGTGTAGAGTGACTCTGCGCCACAGAGTGGGCAAGTTCACTGTCAgg                                                                                                             >  2:2283118/1‑150 (MQ=255)
                                         aatatcggcatccagttaatgacgctggatgaactcaacaatgtggatgatttccgtcaggtcgtcagcaccaccgcgaatctgaccacctttacccctaatcctgacAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCa                                                                                                               >  1:1315160‑M1/109‑146 (MQ=255)
                                            gcCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAg                                                                                                        <  1:1757805/150‑1 (MQ=255)
                                            gcCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAg                                                                                                        <  1:1757807/150‑1 (MQ=255)
                                             cctcctCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGGTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAgg                                                                                                       <  2:1728454/150‑1 (MQ=255)
                                               tcctcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAgggg                                                                                                     >  2:743185/1‑150 (MQ=255)
                                                  tcGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCGTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTaa                                                                                                  >  1:468140/1‑150 (MQ=255)
                                                  tcGACATCAATCCCCACCGCCGCGAAACGCTGTGTCGCTAGCTCCCAGGCCTGTTCCAGGTGAGTGGTCAGGCGCAAAGCTCCTTTGTCGGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAAGTGCACTGTCAGGATGAGGGGTaa                                                                                                  >  1:2893660/1‑150 (MQ=255)
                                                   cGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTaaa                                                                                                 >  2:217240/1‑150 (MQ=255)
                                                   cGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGGTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTaaa                                                                                                 <  2:2300747/150‑1 (MQ=255)
                                                    gACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAg                                                                                                <  1:2265768/150‑1 (MQ=255)
                                                         cAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAggtggt                                                                                           <  1:2655127/150‑1 (MQ=255)
                                                         cAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCATGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAggtggt                                                                                           >  1:912210/1‑150 (MQ=255)
                                                          aaTCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTc                                                                                          <  1:513885/150‑1 (MQ=255)
                                                          aaTCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTc                                                                                          <  1:1068991/150‑1 (MQ=255)
                                                           aTCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTGCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCa                                                                                         <  2:1831356/150‑1 (MQ=255)
                                                           aTCCCCACCGCCGCGAAACGCGGGGTCGCTAGCTCCCAGGCCTGTTCCCGTGGGGGGGTCATGCGCAAAGCTCCGGTGTCGGGCGGGGAGAGTGAATCTGCGCCACCTAGTGGGCACGTTCACTGTCAGGGTGAGGGGGAAAGGTGGTcc                                                                                         >  1:2670878/1‑149 (MQ=255)
                                                                  ccgccgCGACACGCTGTTTCGCGAGCTCCCAGGCCTGGTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGGGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGAGTcgc                                                                                  <  2:72292/150‑1 (MQ=255)
                                                                  ccgccgCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGGTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTcgc                                                                                  <  1:1812910/150‑1 (MQ=255)
                                                                   cgccgcGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTcgcg                                                                                 <  1:957001/150‑1 (MQ=255)
                                                                    gccgcGAAACGCTGTTTCGCTAGCTCCCAGGCCTGGTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCgg                                                                                <  2:2059772/150‑1 (MQ=255)
                                                                     ccgcGAAACGCTGTTTCGCTAGCTCCCAGGCCTGGTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCggt                                                                               <  1:2223950/150‑1 (MQ=255)
                                                                       gcgAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCggtgg                                                                             >  1:2167145/1‑150 (MQ=255)
                                                                        cgAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGGATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCggtggt                                                                            >  1:246221/1‑150 (MQ=255)
                                                                         gAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGgtggtg                                                                           <  2:2660772/150‑1 (MQ=255)
                                                                         gAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGgtggtg                                                                           >  1:2694781/1‑150 (MQ=255)
                                                                              gCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTgac                                                                      >  1:774116/1‑150 (MQ=255)
                                                                                tGTTTCGCTAGCTCCCAGGCCTGTGCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTgacga                                                                    <  2:1240997/150‑1 (MQ=255)
                                                                                  tttCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGAcc                                                                  <  1:446117/150‑1 (MQ=255)
                                                                                      gCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGAc                                                              >  1:1196244/1‑150 (MQ=255)
                                                                                        tAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACgg                                                            >  1:1090238/1‑150 (MQ=255)
                                                                                         aGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACAAAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGa                                                           >  1:2398573/1‑150 (MQ=255)
                                                                                          gCTCCCAGGCCTGGTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGaa                                                          <  1:2218427/150‑1 (MQ=255)
                                                                                            tCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAat                                                        >  1:2311004/1‑150 (MQ=255)
                                                                                              ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCTGATTCGCGGTGGTGCTGACGACCTGACGGAAatca                                                      <  1:1305585/150‑1 (MQ=255)
                                                                                              ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAatca                                                      <  1:1029642/150‑1 (MQ=255)
                                                                                              ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAatca                                                      >  2:2514211/1‑150 (MQ=255)
                                                                                              ccAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAatca                                                      >  2:1366468/1‑150 (MQ=255)
                                                                                                       ttCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACAAAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCAACCACAttg                                             >  1:2591930/1‑150 (MQ=255)
                                                                                                         ccAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgtt                                           <  2:34212/150‑1 (MQ=255)
                                                                                                         ccAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgtt                                           <  2:788664/150‑1 (MQ=255)
                                                                                                          cAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACAttgttg                                          <  1:2199315/150‑1 (MQ=255)
                                                                                                            gTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAg                                        <  1:1568287/150‑1 (MQ=255)
                                                                                                            gTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAg                                        <  1:98899/150‑1 (MQ=255)
                                                                                                                 gTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCAt                                   <  1:1315353/150‑1 (MQ=255)
                                                                                                                     tCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAg                               >  1:2448314/1‑150 (MQ=255)
                                                                                                                          cgcAAAGCTCCTTTGTCTGTCTTGTAGAGTGAATATGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGAGCTGACGACCTTAAGGAAATCATCCACATTGTTGAGTTCATCCAGCggcc                          >  2:2253126/1‑147 (MQ=255)
                                                                                                                          cgcAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCa                          >  2:37833/1‑150 (MQ=255)
                                                                                                                            cAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCAtt                        <  2:1126348/150‑1 (MQ=255)
                                                                                                                               aGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAAc                     <  1:2253526/150‑1 (MQ=255)
                                                                                                                                gCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACt                    >  1:1574390/1‑150 (MQ=255)
                                                                                                                                 cTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTg                   >  2:1330822/1‑150 (MQ=255)
                                                                                                                                  tCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTgg                  <  2:962968/150‑1 (MQ=255)
                                                                                                                                  tCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTgg                  <  2:1456638/150‑1 (MQ=255)
                                                                                                                                   ccTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGa                 <  1:2223523/150‑1 (MQ=255)
                                                                                                                                   ccTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGa                 <  1:1486679/150‑1 (MQ=255)
                                                                                                                                   ccTTTGTCTGTCATGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGa                 <  2:912210/150‑1 (MQ=255)
                                                                                                                                     tttGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATg               >  1:721887/1‑150 (MQ=255)
                                                                                                                                        gtctgtcGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCg            <  1:363685/150‑1 (MQ=255)
                                                                                                                                        gtctgtcGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCg            <  1:363704/150‑1 (MQ=255)
                                                                                                                                        gtctgtcGTGTAGAGTGAATCTGCGCCACAAAGTGGGCAATTTCACAGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCAACCCCATTGTTGACTTCATCCAGCGTCATTAACAGGATGCCg            >  1:273001/1‑150 (MQ=255)
                                                                                                                                           tgtcGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGata         >  1:2366138/1‑150 (MQ=255)
                                                                                                                                                tgtAGAGTGAATCTGCGCCACATAGTGGGCAATTTCTGTGTGAGGATTAGGGGTAATGGTGGTCAGATTCGCGGTGGTGCTGTCGACCTGACGGAAATCATCCACATTGTTGAGTTCATCGAGCGTCATTATCTGGATGCCGATATTggc    >  2:1567891/1‑148 (MQ=255)
                                                                                                                                                 gtAGAGTGAATCTGCGCAAAATAGTGTGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGAAGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATTCCGATATTGcag   >  2:1937889/1‑148 (MQ=255)
                                                                                                                                                  tAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGa  <  1:2538138/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
GCCAGCAGTGCATTGAAACGGGTAAACGATCAAGTTGGCGCAGCGCCTCCTCGACATCAATCCCCACCGCCGCGAAACGCTGTTTCGCTAGCTCCCAGGCCTGTTCCAGTTGAGTGGTCATGCGCAAAGCTCCTTTGTCTGTCGTGTAGAGTGAATCTGCGCCACATAGTGGGCAATTTCACTGTCAGGATTAGGGGTAAAGGTGGTCAGATTCGCGGTGGTGCTGACGACCTGACGGAAATCATCCACATTGTTGAGTTCATCCAGCGTCATTAACTGGATGCCGATATTGCCGA  >  NC_000913/4095862‑4096157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.