| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3905650 | 90 (0.910) | 5 (0.060) | 4/248 | NT | 5.7% | intergenic (‑53/+81) | bglF/bglG | fused beta‑glucoside‑specific PTS enzymes: IIA component/IIB component/IIC component/transcriptional antiterminator of the bgl operon |
| ? | NC_000913 | = 3905672 | 86 (0.970) | intergenic (‑75/+59) | bglF/bglG | fused beta‑glucoside‑specific PTS enzymes: IIA component/IIB component/IIC component/transcriptional antiterminator of the bgl operon | |||||
TTGCTTTCATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAACCTGAAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3905488‑3905650‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaacctgaaaaaaaTTGCTTGATTCACGTCAGGCCGTTTTTTTCAGGTTTTTTTTTGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTCTGATGCATTGCG < NC_000913/3905672‑3905525 TTGCTTTCATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAA > 2:1431201/1‑150TTGCTTTCATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACACC‑AAAAAAA > 2:688127/1‑150 TGCTTTCATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAA < 2:1113076/150‑1 GCTTTCATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAA > 2:399169/1‑150 GCTTTCATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAA > 1:197996/1‑150 TTTCATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAAac < 2:610875/150‑3 TTTCATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAACC < 1:1130389/150‑1 TTCATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAACCT > 2:498227/1‑150 CATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAAacctg > 2:745622/1‑145 CATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAACCTGA > 2:863064/1‑150 CCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAACCTGAAAA > 1:1638575/1‑150 CCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAACCTGAAAA > 1:1236376/1‑150 CCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGAATATTTTTATGGCTAACTCCGTCATAACTTGCCATCTACCGCATTGCGGCAAAACTCC‑AAAAAAAAACCAGAAAA > 1:1101913/1‑150 CCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATATGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAACCTGAAAA > 1:1141532/1‑150 CTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCAAAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAAACTGATAAA > 2:864004/1‑150 ATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAG < 1:1430692/150‑1 TCAGACTCACATTGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCAAAAAAAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAG < 2:402923/150‑1 TCAGACTCACAATGTTATATGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG < 2:326917/150‑1 AGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCCAAAAAAAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGGT < 1:916676/150‑1 CAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGGTTTTTTTTT < 2:201927/150‑1 AAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGGTTTTTTTTTGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTC < 2:50852/150‑1 ACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGGTTTTTTTTTGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTCTG < 2:995688/150‑1 CCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGGTTTTTTTTTGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTCTGA > 2:358248/1‑150 TGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGGTTTTTTTTTGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTCTGATG > 1:1310377/1‑150 GAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGGTTTTTTTTTGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTCTGATGC < 1:833820/150‑1 GAAAAAAATTGCTTGATTCACGGCAGGCCGTTTTTTTCAGGTTTTTTTTTGGAGTTTTGCCGCAATGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTCTGATGC < 2:98121/150‑1 AAATTGCTTGATTCACGGCAGGCCGTTTTTTTCAGGTTTTTTTTTGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTCTGATGCATTGC < 2:418992/150‑1 AAATTGCGTGATTCACGTCAGGCCGTTTTTTTCAGGTTTTTTTTTGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTCTGATGCATTGC < 2:1700117/150‑1 AATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGGTTTTTTTTTGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTCTGATGCATTGCG < 2:492400/150‑1 AATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGGTTTTTTTTTGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTCTGATGCATTGCG < 2:1669309/150‑1 TTGCTTTCATCCTTTAATTTAAAACGTAATCGCGTTGCGCAATGCATCAGACTCACAATGTTATCTGCGCCCCCGACTCCTGCGACTATTTTTCTGGCTAACTCCGTCATAACTTGCCCTCTACCGCTTTGCGGCAAAACTCC‑AAAAAAAAACCTGAAAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3905488‑3905650‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaacctgaaaaaaaTTGCTTGATTCACGTCAGGCCGTTTTTTTCAGGTTTTTTTTTGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTCTGATGCATTGCG < NC_000913/3905672‑3905525 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |