| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4023769 | 93 (0.940) | 6 (0.060) | 4/266 | NT | 6.5% | coding (216/783 nt) | tatD | quality control of Tat‑exported FeS proteins; Mg‑dependent cytoplasmic DNase |
| ? | NC_000913 | = 4023797 | 85 (0.900) | coding (244/783 nt) | tatD | quality control of Tat‑exported FeS proteins; Mg‑dependent cytoplasmic DNase | |||||
TAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4023615‑4023769‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcgCGGCCAGCTCAATAATCGCTTCTTCAGTCGCAGCTTGCCACTGGCTGCTGTCGTGAGGATGTACGCCCGCCGTTGACCAACAGGACGAATACTGACGCGCCAGCTTTTGCGCCTGCTGGCTTTCACGCAGGTTAGTGCCGGTGATGAGT < NC_000913/4023797‑4023649 TAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAG < 1:590695/150‑1TAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAG < 1:1414608/150‑1 gGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCCACCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAGCTG < 2:433593/149‑1 CGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAGCTG > 2:1184568/1‑150 GTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTTGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAGCTGC < 2:1217041/150‑1 GTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAGCTGC < 2:1038865/150‑1 CATCACCGGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGT‑‑‑‑‑‑‑‑‑‑‑‑GGCCAGCTCAATAATCGCTTCTTCAGTCGCAGCTTGCCACTGG < 2:665680/150‑1 CACCGGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGGCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAGCTGCGCGGCCAGCTCAATAATCGCTTCTTCAGTCGCAGCT < 2:1100431/150‑1 cctGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTGACGACAGCAGCCAGTGGCAAGCTGCGCGGCCAGCTCAATAATCGCTTCTTCAGTCGCAGCTTG < 2:687659/147‑1 CCGGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAGCTGCGCGGCCAGCTCAATAATCGCTTCTTCAGTCGCAGCTTG < 1:48315/150‑1 CCGGCACTAACCTGCGAGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAGCTGCGCGGCCAGCTCAATAATCGCTTCTTCAGTCGCAGCTTG < 1:929744/150‑1 CGGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAGCTGCGCGGCCAGCTCAATAATCGCTTCTTCAGTCGCAGCTTGC < 2:1611101/150‑1 TGCGCGGCCAGCTCAATAATCGCTTCTTCAGTCGCAGCTTGCCACTGGCTGCTGTCGTGAGGATGTACGCCCGTCGTTGACCAACAGGACGAATACTGACGCGCCAGCTTTTGCGCCTGCTGGCTTTCACGCAGGTTAGTGCCGGCGATG > 2:220281/1‑150 TGCGCGGCCAGCTCAATAATCGCTTCTTCAGTCGCAGCTTGCCACTGGCTGCTGTCGTGAGGATGTACGCCCGTCGTTGACCAACAGGACGAATACTGACGCGCCAGCTTTTGCGCCTGCTGGCTTTCACGCAGGTTAGTGCCGGCGATG > 2:225446/1‑150 TGCGCGGCCAGCTCAATAATCGCTTCTTCAGTCGCAGCTTGCCACTGGCTGCTGTCGTGAGGATGTACGCCCGCCGTTGACCAACAGGCCGAATACTGACGCGCCCGCTTTTGCGCCTGCTGGCGTTCACGCAGGTTAGTGCCGGTGATG > 2:1215913/1‑150 TGCGCGGCCAGCTCAATAATCGCTTCTTCAGTCGCAGCTTGCCACTGGCTGCTGTCGTGAGGATGTACGCCCGCCGTTGACCAACAGGACGAATACTGACGCGCCAGCTTTTGCGCCTGCTGGCTTTCACGCAGGTTAGTGCCGGTGATG < 2:423601/150‑1 CGCGGCCAGCTCAATAATCGCTTCTTCAGTCGCAGCTTGCCACTGGCTGCTGTCGTGAGGATGTACGCCCGCCGTTGACCAACAGGACGAATACTGACGCGCCAGCTTTTGCGCCTGCTGGCTTTCACGCAGGTTAGTGCCGGTGATGAG < 1:945403/150‑1 GCGGCCAGCTCAATAATCGCTGCTTCAGTCGCAGCTTGCCACTGGCGGCTGTCGTGAGGATGTACGCCCGCCGGGGACCAACAGGACGACTACTGCCGCGCCAGCTTTTGCGCCTGCTGGCTTTCACGCAGGTTAGTGCCGGTGATGAGT < 1:305754/150‑1 TAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4023615‑4023769‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcgCGGCCAGCTCAATAATCGCTTCTTCAGTCGCAGCTTGCCACTGGCTGCTGTCGTGAGGATGTACGCCCGCCGTTGACCAACAGGACGAATACTGACGCGCCAGCTTTTGCGCCTGCTGGCTTTCACGCAGGTTAGTGCCGGTGATGAGT < NC_000913/4023797‑4023649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |