New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 225949 | NA (NA) | 5 (0.050) | 4/264 | NT | NA | noncoding (191/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
? | NC_000913 | = 225991 | NA (NA) | noncoding (233/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
CCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAC > NC_000913/225873‑226089 | ccGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCGCCAGTAGCGGCGAGCGATCGGggagg > 1:727010/1‑150 (MQ=11) ccGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGggagg > 1:742904/1‑150 (MQ=11) cGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGggagga > 2:231906/1‑150 (MQ=31) gAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGgaggag > 1:402911/1‑150 (MQ=32) gAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGgaggag > 1:1235543/1‑150 (MQ=32) tcgggAAACCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc < 2:341668/148‑1 (MQ=17) tGGGGAAACCCATTGTGTTTCGAAACACTATCATTAACTGAATCCATAGGTTAATTAGGCGAACCGGGGTAACTTAAACATCTAAGTACCCCGAGTAAAAGAAATCAACCGAGAATCCCCCAGTAGCGGCGATCGAAAGGGGAGGAGccc < 2:1544652/150‑1 (MQ=11) tGGGGAAACCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc > 2:763031/1‑150 (MQ=32) gtcgAAACACACTGGGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGATCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCACCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCa > 1:60432/4‑150 (MQ=11) gggAAACCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCag > 1:1645241/1‑150 (MQ=32) ggAAACCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATGCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCaga < 1:66339/150‑1 (MQ=17) aaaCCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGc < 1:954214/150‑1 (MQ=32) aaaCCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGc < 2:1218800/150‑1 (MQ=32) aaCCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc < 2:1188655/150‑1 (MQ=32) aCCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCACCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt < 1:196089/150‑1 (MQ=17) cccAGGTTGTTTCGACACAGTTTCATATACTTATACCTTAGGTTAATGTGGCGATCCGGTGGAACTCAAACATCTAAGTCCGCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg < 2:1591420/150‑1 (MQ=11) aGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAAt < 1:1009190/150‑1 (MQ=32) gtgtgtTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc < 1:621448/150‑1 (MQ=32) gtgtgtTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc < 1:157337/150‑1 (MQ=32) ttgtTTCGACACACTATCATTAACTGAATACATTGTTTATTGAGGCGAACCGGTGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCTGTAGCGGCTAGCGAACGGGGAGGAGCCCAGAGCCTGAATCat < 2:749004/149‑2 (MQ=11) tgtTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑gt > 2:893551/1‑150 (MQ=32) tttCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATCCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑gtgt < 1:1580339/150‑1 (MQ=17) ttCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑gtgtg < 2:1159327/150‑1 (MQ=32) cGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑gtgtgtg < 2:365346/150‑1 (MQ=32) cGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑gtgtgtg < 2:1036825/150‑1 (MQ=32) gACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCCGAATCA‑‑gtgtgtgt > 1:1211504/1‑150 (MQ=17) cacTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTa > 2:615250/1‑150 (MQ=32) cacTATCATTAACTGAATCCATAGGTTAATGACGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGAATCCCCCATTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGCATCA‑‑GGGGGTGTGTTa > 2:1585918/1‑150 (MQ=11) cacTATAATTAACTGAATCCATAGGATAATGAGGCGATCCGGGGGAACTGAAACATCAAACTAGCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCTGCGAGCGAACCAGGAGGAGCCCAGAGCCTGAATCA‑‑GTCTGTGTGttt > 1:272587/1‑149 (MQ=11) acTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAg > 2:531860/1‑150 (MQ=32) tCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTCCCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGa < 1:324075/150‑1 (MQ=17) tCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGa < 2:53799/150‑1 (MQ=32) tCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGa < 2:1428788/150‑1 (MQ=32) cATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGaa > 1:979228/1‑150 (MQ=32) cATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGaa < 1:574379/150‑1 (MQ=32) cATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAAC‑GGTAGGAGCCCAGAGCATGCATCA‑‑GGGTGTGTGTTAGTGGAAg > 2:1186705/1‑150 (MQ=11) aTTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAg > 1:1323975/1‑150 (MQ=32) tAACTGATTCCATAGTTTAATGAGGCGACCCGGGGGAACTGAAACAGCTAAGGACCCCGAGGAAAATAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGTGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCg < 1:1065804/150‑1 (MQ=11) cTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCt < 2:531683/150‑1 (MQ=32) tGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTTGTGGAAGCGTCTg > 1:1046054/1‑150 (MQ=17) tGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTg > 1:1633930/1‑150 (MQ=32) tGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTg > 1:1392947/1‑150 (MQ=32) taatacttAGTTTAATGAGGCGAACCGTGGGAACTGAAACATCTAAGTACCCCGAGTAAAAGAAATCATCCGAGATTCCCCCAGTAGCTGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATGA‑‑GTGTGTGTGTTAGTGGAAGCGTCTgg < 2:272587/143‑1 (MQ=11) aaTCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGa < 1:1382850/150‑1 (MQ=32) ccATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAg > 2:1362159/1‑150 (MQ=32) cATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGTGCGCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAgg < 2:1306365/150‑1 (MQ=17) cATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAgg < 2:1235543/150‑1 (MQ=32) tAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcg > 2:974923/1‑150 (MQ=32) tAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcg > 1:1522440/1‑150 (MQ=32) ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcg > 1:1316365/1‑150 (MQ=32) ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGAGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcg > 1:1309496/1‑150 (MQ=17) ttAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAACTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGcgcgcg < 2:828958/150‑1 (MQ=17) ttAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcg < 1:698357/150‑1 (MQ=12) tGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATAc < 2:979228/150‑1 (MQ=32) tGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATAc > 1:193316/1‑150 (MQ=32) gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACa < 2:1323207/150‑1 (MQ=32) aaCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGa < 1:212983/150‑1 (MQ=32) aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAc > 1:911170/1‑150 (MQ=32) aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAc < 2:766705/142‑1 (MQ=32) aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAc > 1:766705/1‑142 (MQ=32) | CCGAATGGGGAAACCCAGTGTGTTTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCA‑‑GTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAC > NC_000913/225873‑226089 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |