New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 143473672 (0.730)5 (0.050) 4/262 NT 7.0% intergenic (‑512/+222) ynaE/ttcC cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related
?NC_000913 = 1434758 66 (0.710)intergenic (‑534/+200) ynaE/ttcC cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related

AAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATT  >  NC_000913/1434609‑1434906
                                                                                                                                                     |                                                                                                                                                    
aaaaGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGtg                                                                                                                                                      <  2:1258644/150‑1 (MQ=255)
 aaaGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGc                                                                                                                                                     <  2:418598‑M2/150‑2 (MQ=255)
 aaaGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGc                                                                                                                                                     >  1:598161‑M2/1‑149 (MQ=255)
        aCATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAGTAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGctgcggtt                                                                                                                                              >  1:1170033‑M2/1‑142 (MQ=255)
          aTAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCggttgg                                                                                                                                            <  2:638648/150‑1 (MQ=255)
           tAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCggttggt                                                                                                                                           <  1:715017/150‑1 (MQ=255)
            aGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCggttggtt                                                                                                                                          >  2:1210717/1‑150 (MQ=255)
             gATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGACTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGACACGTCGTATGCAAGAACGTGCTGCGGTTGGttt                                                                                                                                         >  2:1354301/1‑150 (MQ=255)
              aTAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGtttt                                                                                                                                        >  1:412558/1‑149 (MQ=255)
              aTAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTg                                                                                                                                        <  2:822333/150‑1 (MQ=255)
              aTAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTg                                                                                                                                        >  1:124827/1‑150 (MQ=255)
               tAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGa                                                                                                                                       >  2:1081872/1‑150 (MQ=255)
                aaCAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGAc                                                                                                                                      <  1:1490988/150‑1 (MQ=255)
                 aCAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACt                                                                                                                                     >  1:1309225/1‑150 (MQ=255)
                 aCAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACt                                                                                                                                     >  1:1174980/1‑150 (MQ=255)
                   aGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACttt                                                                                                                                   <  2:414987/150‑1 (MQ=255)
                    gTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGAGGTTGGTTTGACTttg                                                                                                                                  >  2:523937/1‑150 (MQ=255)
                        ttATCTGAAGTAGAAAAATATCAAGCTGATATAGCCTATATGCCTTTGATGCGGAGGTATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTttgattg                                                                                                                              <  1:75625/150‑1 (MQ=255)
                        ttATCTGAAGAAGAAAAATATCAAGGGGATATAGCCTCTATGCCTTTGCTGCGGAGGAATGAATGTGATGGGAGTGATGTAGCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTttgattg                                                                                                                              <  2:336328/150‑1 (MQ=255)
                           tCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTgaga                                                                                                                           <  2:1680197/150‑1 (MQ=255)
                            cTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGAc                                                                                                                          <  1:1247998/150‑1 (MQ=255)
                            cTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGAc                                                                                                                          <  1:574216/150‑1 (MQ=255)
                             tGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACg                                                                                                                         >  2:1275587/1‑150 (MQ=255)
                              gaagaagaaAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGt                                                                                                                        >  2:1599637/1‑150 (MQ=255)
                                 gaagaaAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGAGGTAGCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGtttt                                                                                                                     <  1:1436658/150‑1 (MQ=255)
                                 gaagaaAAAAATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGtttt                                                                                                                     <  2:1419715/150‑1 (MQ=255)
                                  aagaaAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTg                                                                                                                    >  2:1155865/1‑150 (MQ=255)
                                   agaaAAATATCAAGTTGATATAGCCTTTATGCATTTGATGCGGAGGAATGAATGTGATGGGATGTATGTAACTGAATATTTAAAAAACCGCAGTAACGTCGTATGAACGACCTGGCTCCGGTGGTTTTGACTTTTATTGAGACTTTTTga                                                                                                                   >  2:335092/1‑149 (MQ=12)
                                   agaaAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCCGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTgg                                                                                                                   >  2:1338712/1‑150 (MQ=255)
                                      aaaaTATCAAGGTGAAATAGCCAATTTGCCTTAGATGAGGATGAATGAATGTGATGGGTGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAAt                                                                                                                <  2:75532/150‑1 (MQ=18)
                                        aaTATCAAGGTGATATAGCATATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAAttt                                                                                                              <  2:1156290/150‑1 (MQ=255)
                                          tatCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAAttttt                                                                                                            <  1:1275587/150‑1 (MQ=255)
                                           atCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAATAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAAtttttt                                                                                                           <  1:443063/150‑1 (MQ=255)
                                                ggTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGt                                                                                                      <  2:1174980/150‑1 (MQ=255)
                                                 gTGATATAGCCTATATGCCTTTGATGCGGATGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTg                                                                                                     <  2:1526790/150‑1 (MQ=255)
                                                  tGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTgg                                                                                                    >  2:673265/1‑150 (MQ=255)
                                                   gATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTgga                                                                                                   >  1:60118/1‑149 (MQ=255)
                                                      ataGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCaaa                                                                                                >  1:1180668/1‑150 (MQ=255)
                                                         gCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAAt                                                                                             <  1:135593/150‑1 (MQ=255)
                                                           cTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATgg                                                                                           <  1:1717059/150‑1 (MQ=255)
                                                            tataTGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATggg                                                                                          <  1:875331/150‑1 (MQ=255)
                                                             atatGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATgggg                                                                                         <  1:1599637/150‑1 (MQ=255)
                                                                  ccTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCaaaa                                                                                    >  1:870504/1‑150 (MQ=255)
                                                                  ccTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCaaaa                                                                                    >  2:1300468/1‑150 (MQ=255)
                                                                   cTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAAc                                                                                   >  2:1506493/1‑150 (MQ=255)
                                                                    tttGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGTAATTTTTTTCGGTGGCAAAAATGGGGCAAAACg                                                                                  >  1:641512/1‑150 (MQ=255)
                                                                       gATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTg                                                                               <  1:1081872/150‑1 (MQ=255)
                                                                            ggaggaATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAATGGGGCAAAACGCTGCaaaag                                                                         >  1:1314731/1‑150 (MQ=255)
                                                                                 aatgaatgTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGTAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCaaaaggggc                                                                     <  2:641512/150‑1 (MQ=255)
                                                                                 aatgaatgTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCaaaaggggc                                                                     >  1:1405850/1‑150 (MQ=255)
                                                                                      atgTTATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCaaaaggggcaaaaaa                                                               <  2:819389/150‑1 (MQ=255)
                                                                                       tgtgATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCaaaaggggcaaaaaa                                                               >  1:1319522/1‑150 (MQ=255)
                                                                                           gtGGGTGTGATGTATCTGAATAGTTGAAAAACCGCAGTAACGTCGTTTGCAAGTACGTGCTGCGGTTGGTTTTACTTTGATTGAGACGTTGTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCaaaaggggcaaaaaagggg                                                           <  2:158547/149‑1 (MQ=38)
                                                                                            tGGGAGTGATGTATCAGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCaaaaggggcaaaaaaggggc                                                          <  2:644640/150‑1 (MQ=255)
                                                                                             gggAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCaaaaggggcaaaaaaggggca                                                         >  1:768468/1‑150 (MQ=255)
                                                                                             gggAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCaaaaggggcaaaaaaggggca                                                         >  1:610420/1‑150 (MQ=255)
                                                                                              ggAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCaaaaggggcaaaaaaggggcaa                                                        >  2:1003377/1‑150 (MQ=255)
                                                                                                   gATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCTTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATCGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCaaaaaaa                                                   >  2:949589/1‑150 (MQ=255)
                                                                                                        aTCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGctgcggtttttcaactattcagatacatcactcccatcacattcattcctccgcatcaaaggcatataggctatatcaccttgatatttttctt                                                        >  1:40709‑M2/1‑46 (MQ=255)
                                                                                                        aTCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGctgcggtttttcaactattcagatacatcactcccatcacattcattcctccgcatcaaaggcatataggctatatcaccttgatatttttctt                                                        <  2:40709‑M2/140‑95 (MQ=255)
                                                                                                         tCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTgg                                             >  2:1221973/1‑150 (MQ=255)
                                                                                                                aGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCg                                      <  1:1506493/150‑1 (MQ=255)
                                                                                                                aGTTGAAAAACCGCAGTCACGTCGTAGGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCg                                      >  1:163349/1‑150 (MQ=255)
                                                                                                                 gTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGt                                     >  1:1690965/1‑150 (MQ=255)
                                                                                                                  ttGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGctgcggtttttcaactattcagatacatcactcccatcacattcattcctccgcatcaaaggcatataggctatatccccttgatatttttcttcttcagataaaaactgttat                                    <  2:1511047‑M2/150‑115 (MQ=255)
                                                                                                                  ttGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATTGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGTGCAAAAAAAGAGTGGATTATCGtt                                    >  2:419020/1‑149 (MQ=255)
                                                                                                                  ttGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTa                                    <  2:1337550/150‑1 (MQ=255)
                                                                                                                   tGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGCGGATTATCGTAg                                   >  1:1450185/1‑150 (MQ=255)
                                                                                                                    gAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGAGGTTGGTTTGAATGTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAATGGGCAAAAAAAGAGTGGATTATAGGAGc                                  >  1:354608/1‑150 (MQ=255)
                                                                                                                          ccGCAGTCACGTCGTATGCAAGAACGTGctgcggtttttcaactattcagatacatcactcccatcacattcattcctccgcatcaaaggcatataggctatatcaccttgatatttttcttcttcagataaaaactgttatctatgtat                            <  2:404953‑M2/150‑123 (MQ=255)
                                                                                                                          ccGCAGTCACGTCGTATGCAAGAACGTGctgcggtttttcaactattcagatacatcactcccatcacattcattcctccgcatcaaaggcatataggctatatcaccttgatatttttcttcttcagataaaaactgttatctatgtat                            <  2:1674055‑M2/150‑123 (MQ=255)
                                                                                                                          ccGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTAttg                            >  2:1305759/1‑150 (MQ=255)
                                                                                                                             cAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTAttgttg                         <  1:418598/150‑1 (MQ=255)
                                                                                                                                 cACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGc                     >  1:377828/1‑150 (MQ=255)
                                                                                                                                       gtATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCtgatga               <  1:1300468/150‑1 (MQ=255)
                                                                                                                                        tATGCAAGAACGTGATGCGGTTGGTTTGACTTTGATTGAGTCGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTgatgat              <  2:1309225/150‑1 (MQ=255)
                                                                                                                                           gCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATAtt           <  2:1180668/150‑1 (MQ=255)
                                                                                                                                            cAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATAttt          >  1:588297/1‑150 (MQ=255)
                                                                                                                                               gAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAac       <  2:870504/150‑1 (MQ=255)
                                                                                                                                               gAACGTGCTGCGGTTGGATTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAac       <  1:696936/150‑1 (MQ=255)
                                                                                                                                                 aCGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATAATCGTAGCATATTGATGTCGCTGATGATATTTAacac     >  1:1486149/1‑150 (MQ=255)
                                                                                                                                                  cGTGctgcggtttttcaactattcagatacatcactcccatcacattcattcctccgcatcaaaggcatataggctatatcaccttgatatttttcttcttcagataaaaactgttatctatgtatacttttaaacccaatccgtgtaga    <  2:45111‑M2/150‑147 (MQ=255)
                                                                                                                                                    tgctgcGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCTAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACAtt  >  2:246230/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
AAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGACGTTTTGGAATTTTTTTCGGTGGCAAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATT  >  NC_000913/1434609‑1434906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.