BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
MC JC	NC_000913	1,299,499	Δ1,199 bp	100%	intergenic (+254/‑485)	ychE → / → oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1299499–1300697	1300697	1–1199	128 [0]	[0] 129	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1299498	0 (0.000)	115 (1.200)	86/270	NT	100%	intergenic (+253/‑1684)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
*	?	NC_000913	1300698 =	0 (0.000)	115 (1.200)	86/270	NT	100%	intergenic (+1453/‑484)	ychE/oppA	UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Only 100 of 128 total aligned reads displayed.

CTTCTCAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCG  >  NC_000913/1299350‑1299646

cttctCAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAa                                                                                                                                                     >  2:955928‑M1/1‑149 (MQ=255)

 ttctCAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAat                                                                                                                                                    >  2:17548‑M1/1‑148 (MQ=255)

   ctcAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataa                                                                                                                                                  >  1:1386023‑M1/1‑146 (MQ=255)

     cAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataata                                                                                                                                                >  2:1452876‑M1/1‑144 (MQ=255)

      aaaTTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataa                                                                                                                                               <  1:364562‑M1/150‑8 (MQ=255)

             agttagttATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattg                                                                                                                                        >  2:165088‑M1/1‑136 (MQ=255)

             agttagttATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattg                                                                                                                                        <  1:1663736‑M1/150‑15 (MQ=255)

              gttagttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgt                                                                                                                                       >  2:1409079‑M1/1‑135 (MQ=255)

                tagttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgtta                                                                                                                                     <  1:508949‑M1/150‑18 (MQ=255)

                  gttaTAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaa                                                                                                                                   >  2:312580‑M1/1‑131 (MQ=255)

                    tataAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatt                                                                                                                                 >  1:528966‑M1/1‑129 (MQ=255)

                    tataAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatt                                                                                                                                 >  2:374627‑M1/1‑129 (MQ=255)

                    tataAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaatt                                                                                                                                 >  1:938563‑M1/1‑129 (MQ=255)

                      taAGGATTTCCTTAACTGCTTCTCATCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattat                                                                                                                               <  2:1497810‑M1/150‑24 (MQ=255)

                        aGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattg                                                                                                                             <  1:1694797‑M1/150‑26 (MQ=255)

                         ggATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgt                                                                                                                            >  2:765398‑M1/1‑124 (MQ=255)

                         ggATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgt                                                                                                                            >  1:1065685‑M1/1‑124 (MQ=255)

                         ggATTTACTTAACTGCTTCTCCTAACCATCATGTTATTTTCGCCACATAATAATACTTGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TACACTGCCTTTTGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgt                                                                                                                            >  2:883373‑M1/1‑124 (MQ=255)

                          gATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtg                                                                                                                           <  2:329450‑M1/150‑28 (MQ=255)

                           aTTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgc                                                                                                                          >  1:1409789‑M1/1‑122 (MQ=255)

                              tCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatt                                                                                                                       >  2:658208‑M1/1‑119 (MQ=255)

                              tCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatt                                                                                                                       >  2:659558‑M1/1‑119 (MQ=255)

                               ccTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcattt                                                                                                                      <  1:621323‑M1/150‑33 (MQ=255)

                               ccTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcattt                                                                                                                      <  1:974915‑M1/150‑33 (MQ=255)

                                cTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttc                                                                                                                     <  2:1153228‑M1/150‑34 (MQ=255)

                                  tAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcac                                                                                                                   >  1:529606‑M1/1‑115 (MQ=255)

                                   aaCTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaatttattgtgcatttcact                                                                                                                  >  2:1497458‑M1/1‑114 (MQ=255)

                                      tGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactact                                                                                                               >  2:1664528‑M1/1‑111 (MQ=255)

                                      tGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactact                                                                                                               <  1:1368292‑M1/150‑40 (MQ=255)

                                       gCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTTAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactg                                                                                                              <  2:1631858‑M1/150‑41 (MQ=255)

                                        cTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                                                                             >  2:1559737‑M1/1‑109 (MQ=255)

                                        cTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactgg                                                                                                             >  2:493939‑M1/1‑109 (MQ=255)

                                           ctcctcACCATCATTTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCAACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgataaataattatgcatttcactactgtaaa                                                                                                          >  2:1037057‑M1/1‑106 (MQ=255)

                                              ctcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgt                                                                                                       <  2:938563‑M1/150‑48 (MQ=255)

                                               tcACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgta                                                                                                      <  1:1409079‑M1/150‑49 (MQ=255)

                                                  ccctcatgttATTTTAGCCACATCATAATACTTGGCTTGCTGAAGAATAATTTAAATGATATTAATAAT‑TCCACTTCCTTTGGTAGAGTAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatc                                                                                                   <  1:1042165‑M1/147‑52 (MQ=255)

                                                  ccATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaata                                                                                                   >  1:1253592‑M1/1‑99 (MQ=255)

                                                   catcatGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatca                                                                                                  <  2:792060‑M1/150‑53 (MQ=255)

                                                        tGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaa                                                                                             <  1:165088‑M1/150‑58 (MQ=255)

                                                         gTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaag                                                                                            >  1:841561‑M1/1‑92 (MQ=255)

                                                           tATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagat                                                                                          >  1:570315‑M1/1‑90 (MQ=255)

                                                            aTTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                                                                         <  2:1386023‑M1/150‑62 (MQ=255)

                                                            aTTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                                                                         >  1:781229‑M1/1‑89 (MQ=255)

                                                            aTTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagata                                                                                         >  1:774686‑M1/1‑89 (MQ=255)

                                                              tttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagataga                                                                                       <  2:39910‑M1/150‑64 (MQ=255)

                                                               ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                                                                      <  2:1267800‑M1/150‑65 (MQ=255)

                                                               ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                                                                      <  2:528966‑M1/150‑65 (MQ=255)

                                                               ttCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagac                                                                                      <  1:1143238‑M1/150‑65 (MQ=255)

                                                                  gCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatg                                                                                   <  1:1452876‑M1/150‑68 (MQ=255)

                                                                   ccACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgc                                                                                  >  1:1463831‑M1/1‑82 (MQ=255)

                                                                   ccACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgc                                                                                  >  1:1116820‑M1/1‑82 (MQ=255)

                                                                     aaatcataaTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGTTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgctt                                                                                <  2:75271‑M1/148‑71 (MQ=255)

                                                                         catAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagcc                                                                            >  1:114466‑M1/1‑76 (MQ=255)

                                                                          atAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagcca                                                                           >  1:214155‑M1/1‑75 (MQ=255)

                                                                          atAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACAGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagcca                                                                           <  2:642288‑M1/150‑76 (MQ=255)

                                                                             aTCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaggatagacatgcttagccaatc                                                                        <  2:960214‑M1/150‑79 (MQ=255)

                                                                               ccTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctc                                                                      >  1:1377732‑M1/1‑70 (MQ=255)

                                                                                 tGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctcta                                                                    >  1:1167263‑M1/1‑68 (MQ=255)

                                                                                    gCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctattt                                                                 <  2:1533344‑M1/150‑86 (MQ=255)

                                                                                    gCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctattt                                                                 >  2:1270619‑M1/1‑65 (MQ=255)

                                                                                     cTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttg                                                                >  1:511418‑M1/1‑64 (MQ=255)

                                                                                       tGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgat                                                              >  1:1443490‑M1/1‑62 (MQ=255)

                                                                                         gtgAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattg                                                            <  2:1084570‑M1/149‑91 (MQ=255)

                                                                                            aagaaTAATTGAAATGTTATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaat                                                         <  2:1462364‑M1/150‑94 (MQ=255)

                                                                                            aagaaTAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaat                                                         <  1:765398‑M1/150‑94 (MQ=255)

                                                                                            aagaaTAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaat                                                         <  1:1039132‑M1/150‑94 (MQ=255)

                                                                                             agaaTAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaatt                                                        <  2:1348874‑M1/150‑95 (MQ=255)

                                                                                              taataattGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattg                                                       <  2:806041‑M1/149‑96 (MQ=255)

                                                                                                  aatTCAAATGATATT‑TTAATATCCACTGCCTTTGGTAGAGGAAAGTTCTAAatataaatcaattgttttattattgtgcatttcactactggaactgtaatcagaaaagattgacatgcttagccaatctctatttgattgaatagaaag                                                   <  2:336742‑M1/150‑100 (MQ=255)

                                                                                                   atTGAAATGATATTATTATA‑TCCACTGCCTTTGGTAGAGTAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaaatgaaaga                                                  <  2:761374‑M1/150‑101 (MQ=255)

                                                                                                      gAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgt                                               >  1:960711‑M1/1‑47 (MQ=255)

                                                                                                      gAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgt                                               >  2:1092382‑M1/1‑47 (MQ=255)

                                                                                                      gAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgt                                               >  2:172680‑M1/1‑47 (MQ=255)

                                                                                                         aTGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTTCTAAataataatcaattgttaaattattgttcatttcactactgtaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttg                                            <  1:1221444‑M1/150‑107 (MQ=255)

                                                                                                          tGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgt                                           <  1:312580‑M1/150‑108 (MQ=255)

                                                                                                               ttattaAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaagg                                      <  1:1607167‑M1/150‑113 (MQ=255)

                                                                                                                tattaAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggc                                     <  1:1437232‑M1/150‑114 (MQ=255)

                                                                                                                 attaAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttg                                            <  1:1272636‑M1/142‑107 (MQ=255)

                                                                                                                 attaAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttg                                            >  2:1272636‑M1/1‑36 (MQ=255)

                                                                                                                    aaT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatctttgttaaggcatgg                                 >  1:876863‑M1/1‑33 (MQ=255)

                                                                                                                     aT‑TCCACTGTCTTTGGTTGATGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccattctctatttgattgaattgaaagatgtttgttaaggcatgga                                <  1:295447‑M1/150‑119 (MQ=255)

                                                                                                                     aT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatgga                                <  1:493939‑M1/150‑119 (MQ=255)

                                                                                                                        tcaaatgccttTGGTAGAGGAAAGTGCTAAataatattcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatg                              <  1:872736‑M1/145‑121 (MQ=255)

                                                                                                                         ccACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgc                             >  1:1091423‑M1/1‑29 (MQ=255)

                                                                                                                         ccACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgc                             <  1:955928‑M1/150‑122 (MQ=255)

                                                                                                                         ccACTGCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgc                             >  1:192662‑M1/1‑29 (MQ=255)

                                                                                                                              gCCTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagct                        >  2:703428‑M1/1‑24 (MQ=255)

                                                                                                                               ccTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagcta                       <  2:1197478‑M1/150‑128 (MQ=255)

                                                                                                                                cTTTGGTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctat                      <  1:658208‑M1/150‑129 (MQ=255)

                                                                                                                                    ggTAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaaggtgtttgttaaggcatggatgcaagctatagat                  >  1:539728‑M1/1‑18 (MQ=255)

                                                                                                                                      tAGAGGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattc                >  2:1239454‑M1/1‑16 (MQ=255)

                                                                                                                                       agagGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattct               <  2:1167263‑M1/150‑136 (MQ=255)

                                                                                                                                         agGAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctga             <  2:1065685‑M1/150‑138 (MQ=255)

                                                                                                                                           gAAAGTGCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgata           <  1:1331275‑M1/150‑140 (MQ=255)

                                                                                                                                               atgCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacggt       >  2:778469‑M1/2‑7 (MQ=255)

                                                                                                                                                 gCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacggtca     >  1:1405976‑M1/1‑5 (MQ=255)

                                                                                                                                                 gCTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacggtca     <  1:172680‑M1/150‑146 (MQ=255)

                                                                                                                                                  cTAAataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatgcatgcaagctatagattctgatactgtcaa    >  1:168324‑M1/1‑4 (MQ=255)

                                                                                                                                                    aaataataatcaattgttaaattattgtgcatttcactactggaactttaatcagaaaagatagacatggttagccaatctctatttgattgaattgaaagatgttttttaaggcatggatgcaagctatagattctgatacggtcaata  <  1:769422‑M1/150‑149 (MQ=255)

                                                                                                                                                    aaataataatcaattgttaaattattgtgcatttcactactggaactgtaatcagaaaagatagacatgcttagccaatctctatttgattgaattgaaagatgtttgttaaggcatggatgcaagctatagattctgatacggtcaata  >  1:683220‑M1/1‑2 (MQ=255)

CTTCTCAAATTACAGTTAGTTATAAGGATTTCCTTAACTGCTTCTCCTCACCATCATGTTATTTTCGCCACATCATAATCCTGGGCTTGCTGAAGAATAATTGAAATGATATTATTAAT‑TCCACTGCCTTTGGTAGAGGAAAGTGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCG  >  NC_000913/1299350‑1299646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`