| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,630,919 | G→A | 18.1% | intergenic (+54/+39) | yfgI → / ← guaA | nalidixic acid resistance protein, putative periplasmic protein/GMP synthetase (glutamine aminotransferase) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,630,919 | 0 | G | A | 18.1% | 244.4 / 38.6 | 105 | intergenic (+54/+39) | yfgI/guaA | nalidixic acid resistance protein, putative periplasmic protein/GMP synthetase (glutamine aminotransferase) |
| Reads supporting (aligned to +/- strand): ref base G (50/36); new base A (8/11); total (58/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.56e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
CTGACGCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGAAATCGTA > NC_000913/2630771‑2631068 | cTGACGCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTg‑tagt < 1:61495/150‑1 (MQ=255)cTGACGCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATAAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTg‑tagt > 1:1685913/1‑150 (MQ=255) gACGCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTaa > 2:1149281/1‑150 (MQ=255) cGCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGAAGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACa < 2:907431/150‑1 (MQ=255) ccAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCATATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACaga > 1:1142464/1‑150 (MQ=255) aaCAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAgg > 2:1174041/1‑150 (MQ=255) aCAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TTACTACAGAggg < 1:480417/150‑1 (MQ=255) cAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAATCAGAAGAGAACAAATCGGACAGCTTGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TTACTACAGAGGGt < 1:369892/150‑1 (MQ=255) cAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TTACTACAGAGGGt < 2:588583/150‑1 (MQ=255) cAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TTACTACAGAGGGt < 2:65775/150‑1 (MQ=255) cAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGt < 2:1632635/150‑1 (MQ=255) cAGAAATATGACTGAAGGCGGGCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TTACTACAGAGGGt < 1:203040/150‑1 (MQ=255) aaTATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TTACTACAGAGGGttttt < 1:515226/150‑2 (MQ=255) atatGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TTACTACAGAGGGtttttt < 2:693626/150‑3 (MQ=255) atatGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGt < 2:948060/150‑1 (MQ=255) atatGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGt < 2:941929/150‑1 (MQ=255) tatGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCAATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGtt < 2:91066/150‑1 (MQ=255) tatGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAACAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TTACTACAGAGGGtttttta < 1:197818/150‑4 (MQ=255) atGTCTGAATGCGTTCTCTATCTGATGAAAAGAGTGGGCAAATCAGAAGAGATCAAATGGGAGAGGTGTTTTAATTAATCGATGTTAGTAACTTGAATCCTTTAATTCTTTAAGATAAAATACCCTCTGTTAGT‑ACAGAGGGttttttat < 2:1551642/150‑5 (MQ=255) atGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TTACTACAGAGGGttttttat < 2:436221/150‑5 (MQ=255) tGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttca > 2:678090/1‑150 (MQ=255) gACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcat > 1:890571/1‑150 (MQ=255) gACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcat < 2:602840/150‑1 (MQ=255) tGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGttcattca > 1:839316/1‑150 (MQ=255) gAAGGCGGTCGCTATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTtcattcat < 1:168668/150‑1 (MQ=255) gAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTtcattcat > 1:65164/1‑150 (MQ=255) gAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTtcattcat > 1:13579/1‑150 (MQ=255) gAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTtcattcat > 2:1270497/1‑150 (MQ=255) ggTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCa > 2:115367/1‑150 (MQ=255) gTCGCGATCTGATGAAAAGCGTGGGCAAAGTAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAg > 2:1692660/1‑150 (MQ=255) gTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAg < 1:854173/150‑1 (MQ=255) cgcgATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAggg < 2:458825/150‑1 (MQ=255) cTGATGTAAAGCGTGGGCAAAGCAGAAGAGACCAAATCGTACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAAt < 2:1142464/150‑1 (MQ=255) tgatgaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCGATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATc < 1:8590/150‑1 (MQ=255) tgatgaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATc < 1:1270497/150‑1 (MQ=255) tgatgaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATc > 2:190886/1‑150 (MQ=255) tgatgaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACACTCTG‑TTGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATc > 1:846972/1‑150 (MQ=255) gatgaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCa < 1:450416/150‑1 (MQ=255) gaAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTc > 1:20863/1‑150 (MQ=255) aaaaGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTcc > 2:717611/1‑150 (MQ=255) aaaGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAATATAAAAAACCCTCTG‑TAGTAAAAGAGGGTTTTGTTCATTCATAGTTCAGGGTCAAATCATTccc < 1:738238/150‑1 (MQ=255) aGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCAc < 1:1180854/150‑1 (MQ=255) cAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGt > 2:113301/1‑150 (MQ=255) aaaGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTa < 1:471005/150‑1 (MQ=255) aGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAg > 2:573670/1‑149 (MQ=255) aGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAg < 1:573670/149‑1 (MQ=255) cAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACACTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTg > 1:1214951/1‑150 (MQ=255) agaagaGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTgg > 2:187708/1‑150 (MQ=255) agagAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAAAAGAGGGTTTTTTTCATTCATATTGAAGGGAAAAATAATTCACAATAAATGGTAGATtgcgg > 1:18529/1‑150 (MQ=255) agaACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCt > 2:43229/1‑150 (MQ=255) acaTCGGACAGCTGGTTTACTTACTCGATGGTAGTCACTTCACTCCTCGACTGCTTGCAGATACACAACCCTCTG‑TCGTCCCAGAGGGTTTTGTGCATTCCTAGTGCCGGGGCACATCATTCCCACTCATTGGTAGCTGGCGGCTTGCCg < 1:215481/148‑1 (MQ=255) aTCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAATTCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCt < 1:115367/150‑1 (MQ=255) aTCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCt < 2:72567/150‑1 (MQ=255) ggACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGAt > 1:838221/1‑150 (MQ=255) gCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCAt < 1:164486/150‑1 (MQ=255) cTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATa < 2:65164/150‑1 (MQ=255) aattaatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCAcg > 1:1273478/1‑150 (MQ=255) aatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCggg < 2:839316/150‑1 (MQ=255) aatCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGATGATGTCATACAACACGCggg > 1:881399/1‑150 (MQ=255) cGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGaaa > 2:1022731/1‑150 (MQ=255) aTGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATa > 1:1345381/1‑150 (MQ=255) ttAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCg > 1:1248083/1‑150 (MQ=255) ttAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCg > 1:1260056/1‑150 (MQ=255) aCTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCATGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACt > 1:640988/1‑150 (MQ=255) cTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACAACGCGGGAAATACAGTTCACtt > 1:1032572/1‑150 (MQ=255) tCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGGCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATTCACCACGCGGGAAATACCGTTCACTTCa < 1:49736/150‑1 (MQ=255) aaTCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCAtt < 1:981950/150‑1 (MQ=255) aaTCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCAtt < 2:1463492/150‑1 (MQ=255) aTCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTg < 1:574542/150‑1 (MQ=255) tCCTATAATTCTTTAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCAACTCAATGGTAGCTGGAGGATTGCAACTTATGTCATACAACACGCGGGAAATACCGTTCACTTCATTGa > 1:1694518/1‑150 (MQ=255) tCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGa < 1:1174041/150‑1 (MQ=255) ccTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGAt < 1:389502/150‑1 (MQ=255) ccTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGAt > 1:1613206/1‑150 (MQ=255) taATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGTAAATACCGTTCACTTCATTGATAATg < 2:1273478/150‑1 (MQ=255) aTTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCg > 1:979477/1‑150 (MQ=255) aTTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCg > 1:1294205/1‑150 (MQ=255) ttCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCgg < 2:1525423/150‑1 (MQ=255) cTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGtt > 2:180867/1‑150 (MQ=255) cTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGtt > 1:617449/1‑150 (MQ=255) atgaacaaaaCCCTCTG‑TTACTACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATTCCGTTCACTTCATTGATAATGCAGTTGGaaa > 2:850545/7‑150 (MQ=255) aGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGaaa > 1:1163103/1‑150 (MQ=255) aGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGaaa < 1:602226/150‑1 (MQ=255) gATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAAc > 2:204333/1‑150 (MQ=255) tAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAAcgc > 1:1335942/1‑150 (MQ=255) aaaaaaCCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAAcgcg > 2:1316130/1‑150 (MQ=255) aaaaaaCCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTAATAGTGCAGGGTCAAAACATTCACACTCAATCGTAGCTGGAGGATTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAAcgcg > 1:64529/1‑150 (MQ=255) caaaaCCCTCTG‑TTACTACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGa > 1:22684/2‑150 (MQ=255) aaaaaCCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTCGGAAACGCGa > 1:1001790/1‑150 (MQ=255) aaCCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCg > 1:1479898/1‑150 (MQ=255) aCCCTCTG‑TTACTACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTg < 2:691457/137‑1 (MQ=255) aCCCTCTG‑TTACTACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTg > 1:691457/1‑137 (MQ=255) aCCCTCTG‑TTACTACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGa > 1:957798/1‑150 (MQ=255) aCCCTCTG‑TTACTACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGa > 2:331268/1‑150 (MQ=255) aCCCTCTG‑TTACTACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGa > 1:411973/1‑150 (MQ=255) aCCCTCTG‑TTACTACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACACAATGCTAGCTGGCTTCTTGCCGAATATGTCATACACAACGCGGGAAATAACTTTCACATCATTGATAATGCGGTTGGAAACGCGACCGa > 1:283760/1‑150 (MQ=255) ctctG‑TAGTAACATAGGGTTTTGTTCATTCATAGGGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGa < 1:1393468/150‑1 (MQ=255) ctctG‑TAGTAACAGAGGGTTTTGTTGATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGAAGCTGATGTCATACACCACCCGGGAAATTCCGTTCACTTCATTGATAATGCGGTTGGAACCGCGACCGAGGa > 2:300335/1‑150 (MQ=255) g‑tagtaACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGAAATc > 1:1162528/1‑150 (MQ=255) tagtaACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGAAATCg < 1:1149281/150‑1 (MQ=255) gtaACAGAGGGTTTTGTTCATTCATAGTGAAGGCTCAAATCATTCCCACTCAATGGTAGCTGGCGGCAAGCCGGTTATGTCATACACCACGCGGGAAATATCGTTCACTTCATTGATAATGCGCTAGGAAACGCGACCGAGGAAATCGTa > 2:536106/1‑150 (MQ=255) | CTGACGCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAATCGATGTTAGTAACTTCAATCCTATAATTCTTGAAGATAAAAAACCCTCTG‑TAGTAACAGAGGGTTTTGTTCATTCATAGTGCAGGGTCAAATCATTCCCACTCAATGGTAGCTGGCGGCTTGCCGCTGATGTCATACACCACGCGGGAAATACCGTTCACTTCATTGATAATGCGGTTGGAAACGCGACCGAGGAAATCGTA > NC_000913/2630771‑2631068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |