| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,884,578 | C→A | 6.5% | R881I (AGA→ATA) ‡ | ygcB ← | Cascade complex anti‑viral R‑loop helicase‑annealase Cas3 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,884,578 | 0 | C | A | 6.5% | 572.5 / 19.6 | 181 | R881I (AGA→ATA) ‡ | ygcB | Cascade complex anti‑viral R‑loop helicase‑annealase Cas3 |
| Reads supporting (aligned to +/- strand): ref base C (80/89); new base A (3/9); total (83/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.95e-01 | |||||||||||
Only 100 of 185 total aligned reads displayed.
TGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTG > NC_000913/2884432‑2884727 | tgAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTgg < 2:358112/150‑1 (MQ=255) taaTATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGt < 2:678618/149‑1 (MQ=255) aaTATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTc < 2:812680/150‑1 (MQ=255) aaTATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTc < 2:119862/150‑1 (MQ=255) ataAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTTCTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATc < 1:391005/150‑1 (MQ=255) ataAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATc < 2:942121/150‑1 (MQ=255) ataAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCATACTTAAGTAGGGATAAAACGTTATTGCTATAATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGTGATGACTCTGGTCATc > 1:291158/1‑150 (MQ=255) aaaaTCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACCAGAGTCATccc < 2:549718/150‑1 (MQ=255) aaaaTCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACCAGAGTCATccc < 1:1261751/150‑1 (MQ=255) aaaaTCTCATACCGGGAAATTAAAACAAGATGTACATTGAGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGGCTTATTATAGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATccc < 2:493453/150‑1 (MQ=255) aaaTCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCt > 2:71978/1‑150 (MQ=255) aaaTCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCt > 1:1662289/1‑150 (MQ=255) aaaTCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACCAGAGTCATCCCt > 1:1569287/1‑150 (MQ=255) aaTCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACCAGAGTCATCCCtg < 2:1009731/150‑2 (MQ=255) tctcATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCa < 2:728594/150‑1 (MQ=255) tcATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACCAGAGTCATCCCTGCaaa < 2:1322024/150‑3 (MQ=255) ccGGGACATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCAATCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTg < 1:71247/150‑1 (MQ=255) ccGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTg < 1:1076682/150‑1 (MQ=255) ccGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATATGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTg < 2:755919/150‑1 (MQ=255) ccGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAAACATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGTTCATCACTTCATCCCCTg > 2:209330/1‑150 (MQ=255) gAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGCGATTTGCAGGGATGAATCTGGTCATCCCTTCATCACCTGtata > 2:1021945/1‑150 (MQ=255) aaaTTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAg < 1:1021513/150‑1 (MQ=255) ttAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGta > 2:1385983/1‑150 (MQ=255) aaaaGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCAGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCATTCATCCACTGTATAGGtaat > 2:1552915/1‑150 (MQ=255) agaTGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAAt > 1:1718466/1‑150 (MQ=255) tGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACt > 1:1606604/1‑150 (MQ=255) aTTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTAc > 2:1042614/1‑150 (MQ=255) tgtgCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCTGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTAccc > 1:637869/1‑150 (MQ=255) cACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGcc > 1:1125678/1‑150 (MQ=255) cACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGcc > 2:600529/1‑150 (MQ=255) cACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGcc > 2:1602256/1‑150 (MQ=255) tttatCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCa > 1:903878/5‑150 (MQ=255) aCCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCa > 2:344874/1‑150 (MQ=255) ccTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAg < 1:784650/150‑1 (MQ=255) ccTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGACAg > 2:1388862/1‑150 (MQ=255) atCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGAc > 2:266516/2‑150 (MQ=255) atCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGAc > 1:952182/2‑150 (MQ=255) cccTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGAccc > 1:1028015/1‑150 (MQ=255) cccTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTAATCCCTTCATCCCATGAATAGGTAATAACAATACTTTTACCC‑TGCCAGAccc > 1:1226925/1‑150 (MQ=255) tACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACccatc < 1:11922/150‑1 (MQ=255) cTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATATCAATACTGTTACCC‑TGCCAGACccatcca < 1:1401576/150‑1 (MQ=255) cTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACccatcca < 2:1000830/150‑1 (MQ=255) cTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACccatcca < 1:690305/150‑1 (MQ=255) tAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCcatccatc > 2:1240192/1‑150 (MQ=255) aGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGTTATTAACAA‑ACAGTTTCCCATGCAAGACCAaaccaaccc > 2:847310/1‑149 (MQ=255) aGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCAtccatcca < 1:1551849/150‑1 (MQ=255) ttAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAg < 2:1179639/149‑1 (MQ=255) gTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAg < 2:1662289/150‑1 (MQ=255) ggATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTc < 1:344874/150‑1 (MQ=255) ggATAAAACGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTc < 2:1604530/150‑1 (MQ=255) aTAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTg > 2:1258568/1‑150 (MQ=255) aaaCCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGtt > 1:655254/1‑150 (MQ=255) aaCCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGttt > 1:500869/1‑150 (MQ=255) aaCCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTATGttt > 2:339229/1‑150 (MQ=255) aCCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTc > 2:916775/1‑150 (MQ=255) ccGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTcc > 2:1624772/1‑150 (MQ=255) cGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACACATCCATCCAGATTCTGTTTccc > 1:160425/1‑150 (MQ=255) aTTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTcc < 1:605568/150‑1 (MQ=255) ggTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGc > 2:473650/1‑150 (MQ=255) gTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGcc > 1:414306/1‑150 (MQ=255) gTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGcc > 2:1653134/1‑150 (MQ=255) tCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCa > 2:422109/1‑150 (MQ=255) cTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCaa > 1:1199842/1‑150 (MQ=255) atCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAAc < 1:769289/150‑1 (MQ=255) atCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAAc < 1:840107/150‑1 (MQ=255) tCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAAcc > 1:1577263/1‑150 (MQ=255) tCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAAcc > 1:1524646/1‑150 (MQ=255) tCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAAcc < 2:1086689/150‑1 (MQ=255) cATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATc > 1:424702/1‑150 (MQ=255) ttGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCtt < 1:219031/150‑1 (MQ=255) aTAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAGCAATACTGTTACCC‑TGCCAGACACATCCATCCAGATTCTGTTTCACTTCCAGCCAAAGTAACCCATCTTCAt > 1:1423323/1‑150 (MQ=255) tAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATc > 2:628473/1‑150 (MQ=255) aCAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATcta < 1:1240192/150‑1 (MQ=255) aaTCATTCCCGAAGTTATTTGGGATTTGCAGGGATTACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATctact < 2:55940/150‑1 (MQ=255) aTCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATctacta < 1:732406/150‑1 (MQ=255) aaTTCCCGAATTTATTTTGGATTTGCATGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTactact < 1:995350/149‑1 (MQ=255) ttCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTc < 1:339096/150‑1 (MQ=255) tCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCa > 1:600243/1‑150 (MQ=255) tCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCa > 1:643245/1‑150 (MQ=255) cccGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAg < 2:1570845/150‑1 (MQ=255) aaGTTATTTGGGATTTGCAGGGATGACTCTGGTCCTCCCTTCATCCCCTGTAAAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCAATCTTCAAATACTACTACAGaaaa > 1:1298649/1‑150 (MQ=255) gTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAAc < 1:473650/150‑1 (MQ=255) tATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTa < 1:101893/150‑1 (MQ=255) tGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCCTCCCTCCAGATTCTGTTTCCCTTCCAGCCAAAGTCACCCCTCTTCCTCTACTACTTCAGAAAAACTACggt > 2:276591/1‑148 (MQ=255) gggATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGttt < 1:1460956/150‑1 (MQ=255) tttGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAg < 1:745524/150‑1 (MQ=255) ttGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAgg < 2:500869/150‑1 (MQ=255) ttGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAgg < 2:109794/150‑1 (MQ=255) ttGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAgg < 1:266516/150‑1 (MQ=255) tGCATGGATGACTCTGGTCCTCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTGCCCTTCCCGCCACAGTAACCCATCTTCATCTACTACTTCAGAAATACTACGTTTCCAGGt < 1:276591/150‑1 (MQ=255) tGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGt > 1:455723/1‑150 (MQ=255) gCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGCTTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTg > 1:493192/1‑150 (MQ=255) cAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGAAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGa > 2:225702/1‑150 (MQ=255) aGGGATGACCAGAGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACGTCAGAAAAACTACGGTTCCAGGTGaa > 2:1400550/1‑150 (MQ=255) ggATGACTCTGGTCATCTCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAgg > 2:386518/1‑150 (MQ=255) gACTCTGGTCATCCCTTCATCCCCTGTTTAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTAc < 2:1076266/150‑1 (MQ=255) gACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTAc < 1:758939/150‑1 (MQ=255) aCTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTTTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACa < 1:1388862/150‑1 (MQ=255) ctctGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACAt > 1:573395/1‑150 (MQ=255) ctGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTg < 1:139194/150‑1 (MQ=255) | TGAATATAAAATCTCATACCGGGAAATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCC‑TGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTG > NC_000913/2884432‑2884727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |