| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 289,257 | T→A | 8.9% | intergenic (‑95/+44) | yagI ← / ← argF | CP4‑6 prophage; putative DNA‑binding transcriptional regulator/ornithine carbamoyltransferase 2, chain F; CP4‑6 prophage |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 289,257 | 0 | T | A | 8.9% | 173.4 / 5.4 | 74 | intergenic (‑95/+44) | yagI/argF | CP4‑6 prophage; putative DNA‑binding transcriptional regulator/ornithine carbamoyltransferase 2, chain F; CP4‑6 prophage |
| Reads supporting (aligned to +/- strand): ref base T (49/13); new base A (4/3); total (53/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCTCGTCCGTCACC > NC_000913/289108‑289406 | cGTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCtgt > 1:1668781/1‑150 (MQ=255) gTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCtgtg < 1:99862/150‑1 (MQ=255) ttGATCAGGGCGAGGATCTGCAACGGACTTTCAACAGACTTAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTgg < 2:1565762/150‑1 (MQ=255) tGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTggg < 2:1440877/150‑1 (MQ=255) gAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAAAAATCGTCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACCTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGga < 1:159312/150‑1 (MQ=255) atgTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCACAGGGAGAg‑g < 2:606394/148‑1 (MQ=255) ggTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAg‑gg < 2:1012618/150‑1 (MQ=255) ggTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCACAGGGAGAg‑gg < 2:611010/150‑1 (MQ=255) gTCGAGGATCTGCAACGCCCGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCCCGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGc > 1:953754/1‑150 (MQ=255) gTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCACAGGGAGAg‑gga < 1:1623266/150‑2 (MQ=255) aGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCggg < 1:1024330/150‑1 (MQ=255) ggATCTGCAACGCACGTTCAACAGACTGAATGATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCgggg > 1:1335507/1‑150 (MQ=255) tCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGa < 2:1597613/150‑1 (MQ=255) gCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCATGTGGGAGAG‑GGCCGGGGTGAgg‑g > 1:844449/1‑150 (MQ=255) cAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑Gc > 1:997377/1‑150 (MQ=255) aCGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCAc > 2:1302081/1‑150 (MQ=255) aCGCACGTTCAACAGACTGAATAAGCGGCATAATGCTGGCATGTCCACGCGGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCAc < 1:388/150‑1 (MQ=255) cGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCAcc > 1:510315/1‑150 (MQ=255) gCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCa > 1:1011292/1‑150 (MQ=255) cAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTTAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCa > 2:555499/1‑150 (MQ=255) cAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAAGGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCa > 1:859880/1‑150 (MQ=255) aaCAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCCCCAACGCGCAg > 1:704602/1‑150 (MQ=255) cTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGAcc > 2:454387/1‑150 (MQ=255) cTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGAcc > 1:550134/1‑150 (MQ=255) gAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGCCCCa > 2:836624/1‑150 (MQ=255) atCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCAc > 1:1024563/1‑150 (MQ=255) atCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCCGACCCCATCAc > 2:590569/1‑150 (MQ=255) ccATAATGCTGGCAGGCCCCCCGCGGTATAACGGCTAACCCGAACCTTTTGCGGTAT‑TAAAAATCAATGACCGGCCGCCGGGGTCCCCCCGCC‑CCCTGTGCGTGTG‑GGCCGGGGTGCGG‑GCACCAACGCGCAGCGGACCCAATCACTccc < 2:346821/149‑1 (MQ=255) aaTGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCacg > 2:569068/1‑148 (MQ=255) tGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCg > 1:385585/1‑150 (MQ=255) gCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGt > 2:912564/1‑150 (MQ=255) tGGAATGTCCACGCTGCAATTAAGGCGAAACCTTCCTTTTTTGGGGAT‑GAAAAATCATTGAATTGGCGCGGGTGTTCTCCCTCT‑CCGGGGGGGTGTG‑GGCGGGGGGGTGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTg < 1:5567/150‑1 (MQ=255) gggCATGCCCACGCTGTAATTAAGGCTAAAACGTACCTTTTTCGGTAT‑TAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGTG‑GGCCGGGGGGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTg < 2:1012597/149‑1 (MQ=38) gggCATGCCCACGCGGGAATTAAGGCGAAAAGGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGCGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGGGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTg < 2:1202605/149‑1 (MQ=39) ggCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGc > 1:411003/1‑150 (MQ=255) cATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCCAGCGTTGCca > 2:465113/1‑150 (MQ=255) tGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCACGCGTTGCcatc > 2:1683463/1‑150 (MQ=255) gTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCcatca > 1:398057/1‑150 (MQ=255) gTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCcatca > 2:914796/1‑150 (MQ=255) gCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCg > 1:1159779/1‑150 (MQ=255) gCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCAGGGGTGAGC‑GCACCAACTCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATAACCg > 1:156381/1‑150 (MQ=255) ggAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTAGCCATCATCACCGCCt > 1:606916/1‑150 (MQ=255) gAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCtt > 2:580513/1‑150 (MQ=255) ttAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCATGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGCCCCAATCCCTCCCCACCCGTGGCCATCATCACCGCCTaaaa > 2:872435/1‑149 (MQ=38) aaGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCg > 1:462236/1‑150 (MQ=255) ggCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTa > 1:985420/1‑150 (MQ=255) taaaaCGTCTCTTTTTTGGTATATAAAAATCATTGATAGTGGGCGGGGGTTCCCCCGCT‑CGCTGGGTGCTGG‑GGCGGGGGTGGGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATg < 2:704602/149‑1 (MQ=255) aaaaCGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGAGTTGCCAACATCACCGCCTTAAACGTATgaa > 2:351164/1‑148 (MQ=255) cGTACCTTTTTCGGGAT‑GAAAAATCAATGAACTGGAGCCGGTGTTCTCCCTCT‑CCATGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCg < 2:844449/150‑1 (MQ=255) cGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑CCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCTTCCGCGCCTTAAACGTATGCATCCg > 2:1247784/1‑150 (MQ=39) cTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGAGGGAGAG‑GGCCGGGGTGAGG‑GCTCCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGTtttt > 1:1586122/1‑150 (MQ=255) tttCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCg > 1:1210348/1‑150 (MQ=255) ggAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGTCCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTgg > 2:1364219/1‑150 (MQ=255) ggAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTgg > 1:1225111/1‑150 (MQ=255) gAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAT‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCCGCCCCAATCACACCCCAAGCGTTGCCATCCTCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTggg > 2:1637175/1‑149 (MQ=39) aaaaaTCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGaa > 1:1295578/1‑150 (MQ=255) aaaaaTCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCATAATCGTATGCATCCGGTATTCCGCCTGGTCGaa > 2:392004/1‑150 (MQ=255) aaaaTCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAac > 1:1717436/1‑150 (MQ=255) aaaTCAATTAAATGGCGCCGGTGTGCTCCCTCT‑CCCTGGGGGTGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAaca < 1:991562/150‑1 (MQ=255) aaaTCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAaca > 2:1025604/1‑150 (MQ=255) aaaTCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAaca > 2:866006/1‑150 (MQ=255) tGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCACGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCt > 2:1175846/1‑150 (MQ=255) tGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCt > 2:968632/1‑150 (MQ=255) aGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCCCCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGATCACGATGCTCGccgccg > 1:303638/1‑150 (MQ=255) gggTGTGCCCCCTCC‑CCTGGGGGGTGTG‑GGCGGGGGTGGGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACt < 2:550134/149‑1 (MQ=255) cGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACt > 1:1584104/1‑150 (MQ=255) gggtttCTCCCCCTACCCGGTGGGGGTGCGGGCGGGGTGGGGCCCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGa < 1:1453233/146‑1 (MQ=255) ccccggccctct‑cccaCAGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACGCaa > 2:240550/7‑150 (MQ=255) ccggccctct‑cccaCAGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGGATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCaacc > 2:918446/5‑148 (MQ=255) ctccctct‑ccctGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAacac > 1:1047745/1‑150 (MQ=255) gccctct‑cccaCAGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACAcc > 2:41653/2‑150 (MQ=255) ccctct‑ccctGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACAccg > 2:335997/1‑149 (MQ=255) ct‑ccttGGGGGTGGG‑GGCGGGGGGGGGG‑CCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCTcgtc < 2:411003/150‑1 (MQ=255) ccctGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGCTGCTCGCCGCCGACTCAAACACCTcgtccg > 2:904459/1‑150 (MQ=255) ccctGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCTcgtccg < 2:1024563/150‑1 (MQ=255) cctGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCTcgtccgt > 2:221807/1‑150 (MQ=255) tgGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCTCGTCCGTCAcc < 2:997377/150‑1 (MQ=255) | CGTTGAACAGGTCGAGGATCTGCAACGCACGTTCAACAGACTGAATAATCGGCATAATGCTGGCATGTCCACGCTGGAATTAAGGCGAAAACGTACCTTTTTCGGGAT‑GAAAAATCAATGAAATGGAGCCGGTGTTCTCCCTCT‑CCCTGTGGGAGAG‑GGCCGGGGTGAGG‑GCACCAACGCGCAGCGGACCCAATCACTCCCCAAGCGTTGCCATCATCACCGCCTTAATCGTATGCATCCGGTTTTCCGCCTGGTCGAACACGATGCTCGCCGCCGACTCAAACACCTCGTCCGTCACC > NC_000913/289108‑289406 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |