| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,971,146 | T→C | 5.0% | intergenic (+13/‑125) | ygdQ → / → ygdR | UPF0053 family inner membrane protein/DUF903 family verified lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,971,146 | 0 | T | C | 5.0% | 354.8 / 6.9 | 119 | intergenic (+13/‑125) | ygdQ/ygdR | UPF0053 family inner membrane protein/DUF903 family verified lipoprotein |
| Reads supporting (aligned to +/- strand): ref base T (56/57); new base C (4/2); total (60/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.00e-01 | |||||||||||
Only 100 of 122 total aligned reads displayed.
TGATTCTGGTGGGCTTTACCCTGATTCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGATGAAAAAATGGGCAGTAATAAT > NC_000913/2970997‑2971293 | tGATTCTGGTGGGCTTTACCCTGATTCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGct < 2:964623/150‑1 (MQ=255)tGATTCTGGTGGGCTTTACCCTGATTCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGct > 2:600723/1‑150 (MQ=255)tGATTCTGGTGGGCTTTACCCTGATTCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGct < 2:227523/150‑1 (MQ=255) ggCTTTACCCTGATTCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGa > 1:616332/1‑150 (MQ=255) ggCTTTACCCTGATTCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGa > 1:1166223/1‑150 (MQ=255) gCTTTACCCTGATTCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGGGGGAg > 1:1261813/1‑150 (MQ=255) gCTTTACCCTGATTCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAg > 1:928596/1‑150 (MQ=255) tttACCCTGATTCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAggg < 2:1238625/150‑1 (MQ=255) cTGATTCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCCCTCCCGCAGGAGAGCGTacg < 2:1591484/150‑2 (MQ=255) ttCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTa > 1:26992/1‑144 (MQ=255) cTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTcc < 2:604525/150‑1 (MQ=255) tGGACAGATTCGACATCCACGCACCGTAAGGTTACATCTACTTCGCGATGCGCATCTCAATTGCGGTTGAAAGCCTCAACTTGAATCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCt < 1:284170/150‑1 (MQ=255) tGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCt > 1:1333877/1‑150 (MQ=255) tGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCt > 2:653962/1‑150 (MQ=255) tGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCt > 1:1414446/1‑150 (MQ=255) tGGAAAGTTTCGAAATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCt < 2:326420/150‑1 (MQ=255) ggAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCACAACAAAAAGAATCCGCTCTG‑ATTCTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCtt > 1:1374598/1‑150 (MQ=255) aaGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGCTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTa < 1:143577/150‑1 (MQ=255) aGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTAc < 1:1244658/150‑1 (MQ=255) gTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTAcc < 2:1376681/150‑1 (MQ=255) gTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTAcc < 2:1383293/150‑1 (MQ=255) gTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTAcc < 2:714424/150‑1 (MQ=255) ttCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGTATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCt > 2:1207369/1‑150 (MQ=255) cACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTa < 1:1499508/150‑1 (MQ=255) cGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAg < 1:97425/150‑1 (MQ=255) tACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGAt < 2:1572109/150‑1 (MQ=255) cGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGAtttt > 1:1520519/1‑150 (MQ=255) gAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTc > 1:649402/1‑150 (MQ=255) aaaGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGCTTGAAAGCCTAAACTTGATTCGCAACAAAAAGAAACCGATCTG‑ATACTCCGTACGCTCTCCTCCGTGAGGTCGTACTCACTCCTTTTACCCTCACACTATAAGATATTcc > 1:1025521/1‑150 (MQ=255) aGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTg < 1:600723/150‑1 (MQ=255) aGGTTACATCTACTTCGCGATGTTCATCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTg < 2:1492525/150‑1 (MQ=255) gTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCt > 1:1396280/1‑150 (MQ=255) ttACATCTACTTCGCGATGTTCTTCTCTATTGCCGTTGAAAGCCACAACTTGTTTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGTGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCtt < 2:1313827/150‑1 (MQ=255) aCATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTc < 2:298864/150‑1 (MQ=255) aCATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTc < 2:323632/150‑1 (MQ=255) cATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCa > 2:1715513/1‑150 (MQ=255) cATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCa > 2:534373/1‑150 (MQ=255) cATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCa > 2:396184/1‑150 (MQ=255) cTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGa < 2:928596/150‑1 (MQ=255) cTACTTCGCGATGTTCTTCTCTATTGAGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCCCTCTG‑AAACTCCGTACGCTCTCCTGCGGGAGGGCGTAATCACTCCTTTTACACTCACAGTTTAAGATTTTCCTGCTTTCAAGa > 1:1110701/1‑150 (MQ=255) aCTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGata < 1:843108/150‑1 (MQ=255) aCTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTAAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGata < 1:843322/150‑1 (MQ=255) tCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGatatat > 1:1012657/1‑150 (MQ=255) gcgATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCTCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCATTTACCATCACAGTTTAAGATTTTCCTGCTTTCAAGATATATaa > 2:1168161/1‑150 (MQ=255) cgATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAAc > 1:1162272/1‑150 (MQ=255) ttctCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGttt < 2:94820/150‑1 (MQ=255) ctctATTTCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCTGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGTTTtat < 2:55769/150‑1 (MQ=255) ctctATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCCCTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTATCAAGATATATAACGTCGGTTtat > 2:194026/1‑150 (MQ=255) tctATTGCGGTTGAAAGCCTCAACTTCATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCCCAGTTTAAGATTTTCCTGCTTACAAGATATATAACGTCGGttgtaa > 2:129367/1‑146 (MQ=255) aTTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAAc < 2:1116466/150‑1 (MQ=255) aTTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAAc > 1:1299670/1‑150 (MQ=255) aTTGCGGTTGAAAGCCGCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAAc < 1:1607140/150‑1 (MQ=255) tGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAg > 1:1705843/1‑150 (MQ=255) gCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGa > 2:1482675/1‑150 (MQ=255) ggTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACt > 2:1199981/1‑150 (MQ=255) gTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCGCTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACta > 1:1342750/1‑150 (MQ=255) gTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACta > 1:1527440/1‑150 (MQ=255) gTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACta > 1:12825/1‑150 (MQ=255) tGAAAGCCTCAACTTGATTCGCAACTAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCTTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACtatt < 1:521229/150‑1 (MQ=255) tGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACtatt < 1:396184/150‑1 (MQ=255) tGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACtatt > 2:450640/1‑150 (MQ=255) gAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATaa > 1:1680598/1‑139 (MQ=255) aGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACTGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCa < 1:654474/150‑1 (MQ=255) ccTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCAta < 1:365160/150‑1 (MQ=255) aaCTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCAtaggta < 1:534373/150‑1 (MQ=255) aCTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCAtaggtag > 1:190451/1‑150 (MQ=255) aCTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCAtaggtag > 2:1395564/1‑150 (MQ=255) cTTGATTCGCATCTAAAAGAATCCGCTCTT‑ATACTCCGTACTATTTCCTGTGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACTTCGGTTTATAAACAGACTATTATCAtaggtagg < 1:106635/150‑1 (MQ=255) tGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAACCAGACTATTATCATAGGTAGGcc > 2:820180/1‑150 (MQ=255) tGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGcc > 2:587854/1‑150 (MQ=255) gATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCa < 2:238068/150‑1 (MQ=255) aTTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCaa > 1:512195/1‑150 (MQ=255) cGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGCCTATTATCTTAGGTAGGCCAAATg > 1:1105297/1‑150 (MQ=255) caacaaAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAg < 2:1368944/150‑1 (MQ=255) aacaaAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAgg < 1:642923/150‑1 (MQ=255) acaaAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGa > 2:1202926/1‑150 (MQ=255) aaaaaGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATa < 2:1458088/150‑1 (MQ=255) aaaaaGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATa > 1:1415724/1‑150 (MQ=255) aaaaGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTGCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCAAAATGAGGATaa > 2:71525/1‑150 (MQ=255) aaaaGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATaa > 2:71523/1‑150 (MQ=255) aaGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAAcc < 2:190451/150‑1 (MQ=255) aaGAATCCCCCCTGCATA‑TCCGTACCCTCTCCAGCGGGATGGCGTAATCAATACTTTTACCCCCACCCTTTAAGATTTTCCTTCTTTCAATATAAAAAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAAcc < 2:1105297/150‑1 (MQ=255) aGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCg < 2:1547638/150‑1 (MQ=255) aaTCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGa < 2:616332/150‑1 (MQ=255) aTCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGAt > 2:88385/1‑150 (MQ=255) aTCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGAt > 2:1547530/1‑150 (MQ=255) tCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGATg < 2:1467508/150‑1 (MQ=255) ccGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATACGTAGGCCAAATGAGGATAACCGGATGa < 2:473827/150‑1 (MQ=255) cGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGATGaa > 2:1228583/1‑150 (MQ=255) gCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGATGaaa > 1:718407/1‑150 (MQ=255) tG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGATGAAAAAAt < 2:12825/150‑1 (MQ=255) aCTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGATGAAAAAATGGGc < 2:1299670/150‑1 (MQ=255) gtgagTACGCCCTCCCGCAGGAGAGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGATGAAAAAATGGGCa > 2:1478310/5‑150 (MQ=255) cTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGATGAAAAAATGGGCa > 2:1110011/1‑150 (MQ=255) tCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGATGAAAAAATGGGCAg < 2:1333877/150‑1 (MQ=255) ccGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGATGAAAAAATGGGCAGt > 2:547213/1‑150 (MQ=255) agTACGCCCTCCCGCAGGAGAGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGATGAAAAAATGGGCAGta > 1:396571/2‑150 (MQ=255) gTACGCCCTCCCGCAGGAGCGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGATGAAAAAATGGGCAGtaa > 1:150146/1‑150 (MQ=255) tACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAATCAGAATATTATCATAGGTAGGCCAAATGAGGATAACCGGATGAAAAAATGGGCAGtaat > 1:147112/1‑150 (MQ=255) gCTGTCCTGCGGGAGGGCGTACTCTCTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGTATGAAAAAATGGGCAGTaataat < 1:834566/150‑1 (MQ=255) | TGATTCTGGTGGGCTTTACCCTGATTCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTG‑ATACTCCGTACGCTCTCCTGCGGGAGGGCGTACTCACTCCTTTTACCCTCACAGTTTAAGATTTTCCTGCTTTCAAGATATATAACGTCGGTTTATAAACAGACTATTATCATAGGTAGGCCAAATGAGGATAACCGGATGAAAAAATGGGCAGTAATAAT > NC_000913/2970997‑2971293 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |