| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 15,319 | T→C | 6.1% | intergenic (+21/‑126) | dnaJ → / → insL1 | chaperone Hsp40, DnaK co‑chaperone/IS186 transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 15,319 | 0 | T | C | 6.1% | 369.5 / 11.8 | 131 | intergenic (+21/‑126) | dnaJ/insL1 | chaperone Hsp40, DnaK co‑chaperone/IS186 transposase |
| Reads supporting (aligned to +/- strand): ref base T (62/61); new base C (5/3); total (67/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.44e-02 | |||||||||||
Only 100 of 132 total aligned reads displayed.
AAGGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGG > NC_000913/15172‑15468 | aaGGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGCCCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTgg > 1:1041451/1‑150 (MQ=255)aaGGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTgg < 1:949247/150‑1 (MQ=255) ggCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGc > 2:631315/1‑150 (MQ=255) ggCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGc < 1:1673830/150‑1 (MQ=255) ggCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGc > 2:355683/1‑150 (MQ=255) ggCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGc < 2:1541597/150‑1 (MQ=255) gCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGTCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCa > 1:1508403/1‑150 (MQ=255) aGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAgg < 1:1476006/150‑1 (MQ=255) tataCAGCTGCTGCAAGAGCTGCTAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCGCGGGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGc < 1:1285081/147‑1 (MQ=255) gAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGc < 1:631315/150‑1 (MQ=255) cAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑gg < 1:153765/150‑1 (MQ=255) cAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCACGGGCAGGctttt < 1:1198382/150‑5 (MQ=255) aGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCGAACCTGCGAGCACAACAGCCCGCGCTCAAAGTGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGTGCAGGCCT‑ggg < 2:1013061/150‑1 (MQ=255) aGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGGGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑ggg < 1:1698847/150‑1 (MQ=255) gctgctGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCACGGGCAGGcttttgg < 2:1550556/150‑7 (MQ=255) gctgctGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGAAGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTTGGCAGGCCT‑TGGt > 2:1124193/1‑150 (MQ=255) ctgctgCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTa > 1:250432/1‑150 (MQ=255) ctgctgCAAGAGCTGCAAGAAAGCTTCGGGGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCACGGGCAGGcttttggg < 1:1389279/150‑8 (MQ=255) tgcaagagctgcaagaAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTaaaaa > 1:34039/1‑150 (MQ=255) tgcaagagctgcaagaAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTaaaaa > 1:1112098/1‑150 (MQ=255) agctgcaagaAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGt < 2:1128827/150‑1 (MQ=255) gctgcaagaAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTg < 2:136323/150‑1 (MQ=255) tgcaagaAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCg > 1:1134011/1‑150 (MQ=255) tgcaagaAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCg > 2:920201/1‑150 (MQ=255) tgcaagaAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCGTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAACAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAAGAGGGTGCg > 2:1307574/1‑150 (MQ=255) aaaGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAg > 2:609937/1‑150 (MQ=255) aaaGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAg < 1:1199128/150‑1 (MQ=255) aaGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGa > 2:162721/1‑150 (MQ=255) cTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGCCCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGatat > 1:840267/1‑150 (MQ=255) ggTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGa < 2:1657048/150‑1 (MQ=255) gCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCAc > 2:362887/1‑150 (MQ=255) cAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTg > 2:1401985/1‑150 (MQ=255) gAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTgg < 2:1312589/150‑1 (MQ=255) aGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGATGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGc > 1:681730/1‑150 (MQ=255) aGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGc < 1:609937/150‑1 (MQ=255) cacaACAGCCCGCGCTCAATGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTATAAATATGGTGGGGTGAAGATATGCGAGCACCGGTAAAGTGGCgg > 2:114192/1‑150 (MQ=255) cacaACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCgg < 2:1368179/150‑1 (MQ=255) cacaACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCgg < 2:439333/150‑1 (MQ=255) cacaACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCgg > 2:1512953/1‑150 (MQ=255) cacaACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCgg < 1:1499873/150‑1 (MQ=255) caacaGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCgggg > 1:572958/1‑150 (MQ=255) acaGCCCGCGCTCAAAGAGCTTCTTTGATGGCGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGTGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGAt < 1:308630/150‑1 (MQ=255) caGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATc < 1:410663/150‑1 (MQ=255) caGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATc < 1:1277628/150‑1 (MQ=255) caGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATc < 1:1614342/150‑1 (MQ=255) cccGCGCTCAAAGAGCTTCTTTTATGGTTTTTAGAATTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCTTGGGCAGGCCT‑GGGTAAAAATAGGGTGAGTTGAATATATGAGAGCACCTGTAAAGTGGCGTGGAtaaat > 1:1029373/1‑146 (MQ=255) cccGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACt > 2:635617/1‑150 (MQ=255) ccGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTc < 1:1331141/150‑1 (MQ=255) cgcgCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTcc < 1:362887/150‑1 (MQ=255) cgcgCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTcc < 1:1593036/150‑1 (MQ=255) cgcTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTATTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCAACTGTAAAGTGGCGGGGATCACTCCCa > 1:1064616/1‑150 (MQ=255) cAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAg < 2:1112098/150‑1 (MQ=255) aaGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAgcg > 1:213398/1‑150 (MQ=255) gagCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTTACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCGCTGCCATAAGCGCt > 2:1185694/1‑150 (MQ=255) agCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTa < 2:1284869/150‑1 (MQ=255) gCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTaa > 2:1431882/1‑150 (MQ=255) cttcttTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAAc > 1:1523549/1‑150 (MQ=255) ttcttTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCTAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACt > 1:407596/1‑150 (MQ=255) ttcttTGATGGTGGGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCTAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACt < 1:884095/150‑1 (MQ=255) tcttTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACtt > 2:1213302/1‑150 (MQ=255) tcttTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACtt > 2:1568316/1‑150 (MQ=255) tGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAgg < 1:613923/150‑1 (MQ=255) gATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCTAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAggg < 2:407596/150‑1 (MQ=255) aTGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGt < 2:1508403/150‑1 (MQ=255) gtgAAGCAGTTTTTTGACGACCTGACCCGCTACCCTCCCCAAAAGCCTGCCCGTGGGCCGGCCG‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTgg > 2:1076095/1‑150 (MQ=255) gggaagaaGTTTTTTGACGACCTGACCCGCAAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGGGCGTCGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTgg < 2:702696/148‑1 (MQ=255) gaagaaGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTa > 2:742530/1‑150 (MQ=255) gaagaaGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTa > 1:1602501/1‑150 (MQ=255) agaagTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTAtt > 2:949757/1‑150 (MQ=255) agTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGCTCACTCCCATAAGCGCTAACTTAAGGGGTGTGGTATTACg > 1:717504/1‑150 (MQ=255) gTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGc > 2:1012594/1‑150 (MQ=255) ttttttGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGcc < 1:1660481/150‑1 (MQ=255) cgacCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGa < 2:377806/150‑1 (MQ=255) acCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAtt < 1:1543328/150‑1 (MQ=255) cTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTa < 2:627978/150‑1 (MQ=255) cTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTa < 1:703824/150‑1 (MQ=255) gACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAAc > 2:700106/1‑150 (MQ=255) cccGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGt < 2:1643866/150‑1 (MQ=255) cccGCT‑ACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTg < 1:1379932/150‑1 (MQ=255) ccGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATACTCGCTAACTTAAGGGTTGTGGTATTACGCCGGATATGATTTAACgag > 2:314978/1‑148 (MQ=255) ccGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTg > 2:811742/1‑150 (MQ=255) ccGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGAGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTg > 1:368627/1‑150 (MQ=255) cTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGTATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCg < 2:572958/150‑1 (MQ=255) tAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGa < 2:840267/150‑1 (MQ=255) ccTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGa > 2:505388/1‑150 (MQ=255) tCCCCAAAAGCCTGCGCGTGGGCAGGCCT‑GGGTAAAAATTGGGTGCGTTGAAGATCTGCGAGCACCCGTAACGTGGCGGGGATCACTTCCATAACCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAt < 2:679273/150‑1 (MQ=25) tCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAt > 1:419563/1‑150 (MQ=255) tCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAt > 2:184951/1‑150 (MQ=255) ccccAAAACCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAtt < 2:313144/150‑1 (MQ=255) ccAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCAGATGAATTaa > 2:1547910/1‑149 (MQ=255) cccaggCCTGCCCACGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGCAGCTATGCGCGCCCCTGTAAAGGGGCGGGGCTCACTCCCATAAGCGCGAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTAct > 1:1223587/6‑150 (MQ=21) cccaggCCTGCCCACGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAAGCCTGATATGATTTAACTTGCAGATGAATTAct > 2:1351677/6‑150 (MQ=25) cAAAAGCTTGCCCGTGGGTAGGCCT‑GTGTAAAAATAGGGTGCGGTGAAGATATGCGATCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGGTAACTTAATTGTTGTGGTATTACGCCTGTTATGATTTAACGTGCCGATGAATTAct < 1:741490/150‑1 (MQ=25) cAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTAct > 1:890702/1‑150 (MQ=255) caggCCTGCCCACGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTActct > 2:1442997/4‑150 (MQ=255) gCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCAc < 1:635617/150‑1 (MQ=255) gCCTGCCCATGGGCAGGCCTGGGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCa > 2:233481/1‑150 (MQ=255) ccTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACg > 1:367803/1‑150 (MQ=255) ccTGCCCACGGGCAGGCTT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACg > 2:948164/1‑150 (MQ=255) tGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTgg < 2:34039/150‑1 (MQ=255) | AAGGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAACCTCCCCAAAAGCCTGCCCGTGGGCAGGCCT‑GGGTAAAAATAGGGTGCGTTGAAGATATGCGAGCACCTGTAAAGTGGCGGGGATCACTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGG > NC_000913/15172‑15468 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |