| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,529,496 | C→T | 5.9% | A250T (GCG→ACG) | sgcC ← | putative PTS system EIIC permease component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,529,496 | 0 | C | T | 5.9% | 368.7 / 6.1 | 117 | A250T (GCG→ACG) | sgcC | putative PTS system EIIC permease component |
| Reads supporting (aligned to +/- strand): ref base C (62/47); new base T (2/5); total (65/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 118 total aligned reads displayed.
CCCCAGCGTCACAGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCA > NC_000913/4529350‑4529645 | ccccAGCGTCACAGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAAc > 2:1017917/1‑150 (MQ=255) ccAGCGTCACAGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACgg > 2:1312838/1‑150 (MQ=255) cAGCGTCACAGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGt < 2:72150/150‑1 (MQ=255) gCGTCACAGCAGTATCCAGACCGATATACACTTCACGACCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCATCAGTCCATCAAAAAACAGGCGGATAAAGCCCGGGAACAACACCATGATTGCCGAAACGGaaa > 2:1619382/1‑150 (MQ=255) gTCACAGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAatc > 2:1030374/1‑150 (MQ=255) cacaGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAatcat > 2:790748/1‑150 (MQ=255) cagcatTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGTGCAGCAGGCCCTCATCAATCAGGCGGATCATGCGCGGGAACAACACCATGATTACCGTTGCGGCAatcatgg < 2:686475/150‑3 (MQ=255) agcagTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTACCGTTGCGGCAatcatggt < 1:589691/150‑4 (MQ=255) agTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTACCGTTGCGGCAatcatggtgtt < 2:1591555/150‑7 (MQ=255) ttATCCATACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTg < 2:743204/149‑1 (MQ=255) tATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTgg < 2:1222069/150‑1 (MQ=255) aTCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCACCGGTAATCATCAGACTGgc > 2:57826/1‑150 (MQ=255) accAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGATATGGGCATCAGGCCCGCATCAATCAGGCGGATCATGCGCGGGAACAACTCCATTATTGCCGCAACGGTAATCATCAGACTGgcg < 1:382237/149‑1 (MQ=255) ccAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGgcgc > 1:1308587/1‑150 (MQ=255) ccAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGgcgc > 1:466732/1‑150 (MQ=255) ccAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGgcgc > 1:803649/1‑150 (MQ=255) gACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAAc > 2:654304/1‑150 (MQ=255) gACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAAc > 2:949132/1‑150 (MQ=255) gACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTACCGTTGCGGCAatcatg > 1:1341984/1‑136 (MQ=255) gACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTACCGTTGCGGCAatcatg < 2:1341984/137‑2 (MQ=255) gATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCttt < 2:803649/150‑1 (MQ=255) atatACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTa < 2:156110/150‑1 (MQ=255) acacTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGc > 1:554604/1‑150 (MQ=255) ttCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTc < 1:790748/150‑1 (MQ=255) ttCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACC‑TTAAAGCCTTCa > 1:182603/1‑150 (MQ=255) tCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCa < 2:301513/150‑1 (MQ=255) cACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGCTCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCAc > 1:351021/1‑150 (MQ=255) cACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCAc > 1:397835/1‑150 (MQ=255) ccTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAgcc > 2:916120/1‑150 (MQ=255) ccTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAgcc > 1:566015/1‑150 (MQ=255) ccTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAgcc < 1:57826/150‑1 (MQ=255) cTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAACGCCTTCACCAgccg > 1:1015372/1‑150 (MQ=255) cTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAgccg < 1:1030374/150‑1 (MQ=255) cTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAgccg > 2:446834/1‑150 (MQ=255) tttGAAATAATTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGAAGCAGGCCCTCAACACTCAGGCGGATCAAGCGCGGGAACCAAACCATGATTGCCGCAACGGTAATAATCAGACTGCCGCAACCTTTAAAGCCTTCACCAgcctc > 1:1533702/1‑148 (MQ=255) ttGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAgccgcc > 2:1036558/1‑150 (MQ=255) tGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCa < 2:172273/150‑1 (MQ=255) gAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAg < 1:26370/150‑1 (MQ=255) aaaTATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAgg < 1:567357/150‑1 (MQ=255) aaaTATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAgg < 2:566015/150‑1 (MQ=255) atatTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGcc < 2:554604/150‑1 (MQ=255) atTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCaa > 1:1678279/1‑150 (MQ=255) ttCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCaaaa < 1:1017917/150‑1 (MQ=255) atCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCATCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTAGCGCAACCTTAAAAGCCTTAAACAGCCGCCAGGCCaaaa > 1:413698/2‑150 (MQ=255) tGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCCGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGGAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATc > 1:1545921/1‑150 (MQ=255) tGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATc < 2:359546/150‑1 (MQ=255) ggAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCa > 1:1396150/1‑150 (MQ=255) gaagaaCTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAg < 2:809135/150‑1 (MQ=255) aaCTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCg < 2:1234071/150‑1 (MQ=255) aaCTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCg < 2:1606937/150‑1 (MQ=255) aCTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGa > 1:467943/1‑150 (MQ=255) cTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACACCACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCGACCTTTAACGCCGTCACCCGCCGCCAGGCCCAAACTCAGCCCGAg > 2:225222/1‑150 (MQ=255) cTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAg < 1:95478/150‑1 (MQ=255) gCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACg > 1:312139/1‑150 (MQ=255) gTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGAt > 2:1421852/1‑150 (MQ=255) cGGAGCTGGGCAGCAGGCCCTCAACAATCAGGCGGATCATTCGCTGGAACAACACCATGATTGACTCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATaa < 2:253333/150‑1 (MQ=255) cGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGCCCGAGCACTACGCCGATaa > 1:1612219/1‑150 (MQ=255) gaTGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAAACCGAGCACTACGCCGATAATCAc > 2:1035459/1‑150 (MQ=255) ggCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGa < 1:446834/150‑1 (MQ=255) agGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCACCCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAACGCAGACCGCGCACTTCGCCGATAATCACCGGATCGCCg > 1:868564/1‑150 (MQ=255) ggCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGCCTGCCGCAACATTTAACGCCTGCCCCAGCCGCCAGGCCAAAATTCAGCCCGAGCAGTACGCCGATAATCACCGGAGCCCCgc > 1:678135/1‑149 (MQ=255) gCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGAc > 2:1710794/1‑150 (MQ=255) cccTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGAcc > 1:1268669/1‑150 (MQ=255) caacaaTCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGc < 1:1312838/150‑1 (MQ=255) aacaaTCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGcc < 2:1250221/150‑1 (MQ=255) caaTCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGt > 1:1197367/1‑150 (MQ=255) caaTCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGt < 2:397999/150‑1 (MQ=255) aaTCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTa < 2:312139/150‑1 (MQ=255) aTCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAg > 1:1183290/1‑150 (MQ=255) tCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGc < 2:764851/150‑1 (MQ=255) tCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCATTCACAAGCCGACAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGACGTAGc > 1:1045884/1‑150 (MQ=255) ggCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCTGTAGCGtt > 1:1583757/1‑150 (MQ=255) ggCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGtt > 2:936516/1‑150 (MQ=255) cGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTc < 1:1670225/150‑1 (MQ=255) cGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTc > 2:254677/1‑150 (MQ=255) ggATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCt < 2:1352163/150‑1 (MQ=255) aTCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCTCCGGATCGCCGACCATGCCGTAGCGTTTCTgg < 1:321284/150‑1 (MQ=255) tCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGa < 1:1036558/150‑1 (MQ=255) cATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGAt < 2:1183290/150‑1 (MQ=255) aTGCGCGGGAACAACACCATGATTGCCGCAGCGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAAGCACCGGATCGCCGCCCATGCCGTAGCGGTTCGGGAtc > 2:855310/1‑150 (MQ=255) tGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGAtct < 1:654304/150‑1 (MQ=255) ggAACAACACCATGATTGCCGCTACGGTTATCATCAGACTGTCGCAACCTTTATAGCCTTCAGCAGCCGCCAGGCCAAAAATCAGACCGAGCTCTACGCCGATAATCTCCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAg < 1:1619382/150‑1 (MQ=255) ggAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGCCCATGCCGTAGCGTTTCTGGATCTCCTGAg > 1:1183348/1‑150 (MQ=255) ggAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAg > 2:247249/1‑150 (MQ=255) ggAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCAGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAg > 1:1189562/1‑150 (MQ=255) ggAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCAGCCAGGCCAAAAATCAGACCGAGCACTACGCCTATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAg < 2:555644/150‑1 (MQ=255) acaacaCCATGATTGCCGCAACGGTAATCATCTGACTGGAGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCAt > 2:212004/1‑150 (MQ=255) aacaCCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCg > 1:1618788/1‑150 (MQ=255) acacCATGATTGCCGCAACGGTAATCATCAGAAAGGCGCAACCTTTAAAGCCTTCAAAATCCAAAAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGa > 2:1074414/1‑150 (MQ=255) cacCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGCCCATGCCGTAGCGTTTCTGGCTCTCCTGAGCATCGat > 1:1129358/1‑150 (MQ=255) cacCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGat > 1:1135288/1‑150 (MQ=255) cATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATAtt < 2:1308587/150‑1 (MQ=255) aTGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTg < 1:254677/150‑1 (MQ=255) tGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGc > 1:888094/1‑150 (MQ=255) tGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGAGCTCCTGAGCATCGATATTGCGTcc < 1:936516/150‑1 (MQ=255) gCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCCGGCCAAAACTCAGACCGAGAACTACGCCGATAATCACCGGATCGCCGAGCATGCGGGAGCGTTTCTGGCTCTCCTGAGCATCGAGATTGCGTccc > 1:80836/1‑150 (MQ=255) ccGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCt > 1:362130/1‑150 (MQ=255) gCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTATGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTcc > 2:1107100/1‑146 (MQ=255) gCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTATGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTcc < 1:1107100/146‑1 (MQ=255) cAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCa < 2:467943/150‑1 (MQ=255) | CCCCAGCGTCACAGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCA > NC_000913/4529350‑4529645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |