| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,639,554 | A→T | 9.7% | intergenic (+24/+36) | creD → / ← arcA | inner membrane protein/response regulator in two‑component regulatory system with ArcB or CpxA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,639,554 | 0 | A | T | 9.7% | 318.0 / 18.9 | 123 | intergenic (+24/+36) | creD/arcA | inner membrane protein/response regulator in two‑component regulatory system with ArcB or CpxA |
| Reads supporting (aligned to +/- strand): ref base A (62/49); new base T (7/5); total (69/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.76e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
CTGGTGGTGGCGCTGGCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACG > NC_000913/4639405‑4639701 | tggCTCTGGCCGGAATGATTTTTGTTACCCGTAATATCTACTGTTATGCGTTTTCACTGCCTAAAATGAAAGCCATAAATGAAGTTACAACGGACGATGATTTACGTTTCTGTAAATAAGGTTTAAAAATAAAAACGGCGCTAAAAAgcg < 1:1306163/150‑1 (MQ=255) tggCGCTGGCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAgcg < 2:455742/150‑1 (MQ=255) ggCGCTGGCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAATCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAgcgc < 1:1021081/150‑1 (MQ=255) cgcTGGCCGGCATGATTTTTTTTACACTTAATATCGACTTGTTTGCTTTTTAACTGCCTAAAATTAAAGCCAGTAAAGATTTTACAACGGACGATGTGTTACGTATCTGGAAATAAGGTTGAAAAAAAAAAACGGCGCTAAAAAGCGCCg < 1:878693/150‑1 (MQ=255) gtGGCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAATTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAATACGGCGCTTTTTAGCGCCG‑tt < 2:1227178/149‑1 (MQ=255) cTGGCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑tt > 2:68289/1‑150 (MQ=255) tGGCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑ttt > 2:1336364/1‑150 (MQ=255) ggCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGGCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTTTTTAGCGCCG‑tttt < 2:908927/150‑1 (MQ=255) gCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTTTTTAGCGCCG‑ttttt < 1:688767/150‑1 (MQ=255) ccGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑tttttt > 1:1430832/1‑150 (MQ=255) ggCGTGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑tttttttt > 2:1618655/1‑150 (MQ=255) ggCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑tttttttt > 2:607036/1‑150 (MQ=255) cATGAGGTTTGTGACCCGAAAAATCGACTGGTATGCGTTTTAACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGa < 2:1386750/150‑1 (MQ=255) tgatgTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACg > 1:1027639/1‑150 (MQ=255) tgatgTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACg > 2:873128/1‑150 (MQ=255) tgatgTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCAGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACg > 1:358265/1‑150 (MQ=255) gatgTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACgg > 1:632350/1‑150 (MQ=255) atgTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTTTTTAGCGCCG‑tttttatttttcaa < 2:333978/150‑7 (MQ=39) gTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACgttgg > 2:1309008/1‑150 (MQ=255) tgtgACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACTGTTGTaa > 2:1406921/1‑150 (MQ=255) gtgACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGTAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTaaa > 2:903455/1‑150 (MQ=255) gtgACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAACCGGCGCTAAAAAGCTCCG‑GTTTTTTTGACGGTGGTaaa > 1:308479/1‑150 (MQ=255) tgACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAg < 2:534662/150‑1 (MQ=255) gACCCGTAATATCGACTGGTATGTGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGc > 1:660012/1‑150 (MQ=255) aCCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGcc > 2:876435/1‑150 (MQ=255) ccGTAATATCGACTGGTATGCGTTATCACTGCCCAAAATGAAACCCAGTAACGAAGTTACAACGCACGATGAGTTACGTAGCTGGAAATACGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGa < 1:1620253/150‑1 (MQ=255) atatCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAAt < 2:3390/150‑1 (MQ=255) tatCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAAta > 2:1641485/1‑149 (MQ=255) atCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCt > 2:1677420/1‑150 (MQ=255) gACTGGTATGCGTTTTCAATGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTcc < 1:820436/150‑1 (MQ=255) aCTGGTATGTGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCa < 2:660012/150‑1 (MQ=255) aCTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTTACGGGTGTAAAGCCGATTAATATTCCa > 1:1650938/1‑150 (MQ=255) ggTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGAt > 1:1261420/1‑150 (MQ=255) ttATGCTTTTTCACTCCCGAAAATTAAAGCCAGAAAATATGTAAAAACGGACGATGATTTACGTATCTGTAAATAAGTTTTAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATc < 1:607036/149‑1 (MQ=255) gTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATc < 1:1336364/150‑1 (MQ=255) gCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCg < 1:1618655/150‑1 (MQ=255) cGTTTTCACTGCCTAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGc < 2:1281427/150‑1 (MQ=255) cGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGc > 2:1330375/1‑150 (MQ=255) tttttCACTGCCTAAAATGAAAGCCATTAAAGAAGTTACAACGGACTATGATTAACGTATCTGGAAATAAGGTTTAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCa < 1:1252830/149‑1 (MQ=255) gTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCa > 2:1326875/1‑150 (MQ=255) ttttCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAg < 1:972653/150‑1 (MQ=255) cACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGc > 1:1264592/1‑150 (MQ=255) cTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGa > 1:19740/1‑150 (MQ=255) cTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTATTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGa > 2:900540/1‑150 (MQ=255) gCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATa > 2:668050/1‑150 (MQ=255) gCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATATTCCAGATCACCGCAGAAGCGATa > 1:1662462/1‑150 (MQ=255) cGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAAc > 1:112963/1‑150 (MQ=255) gAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAAcc < 1:237941/150‑1 (MQ=255) aaaTGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTTAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACggtgg < 2:1485345/106‑1 (MQ=255) aaaTGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACggtgg > 1:1485345/1‑106 (MQ=255) tGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCAc > 1:1121947/1‑150 (MQ=255) gAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCAcc > 1:455363/1‑150 (MQ=255) tccAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGa < 1:1038293/149‑1 (MQ=255) ccAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGaa < 2:1179819/150‑1 (MQ=255) tACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTATTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGTCgatgat > 2:733527/1‑150 (MQ=255) aCAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGAtt > 1:1667529/1‑150 (MQ=255) cAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGAttt < 1:303193/150‑1 (MQ=255) ccgcaCGATGAGTTACGTATATTGAAATAAGTTTTAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTtcc < 1:1714243/146‑1 (MQ=255) ggACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTtccgg < 1:999972/150‑1 (MQ=255) ggACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTtccgg < 1:1152838/150‑1 (MQ=255) aCGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTtccggcg < 2:388596/150‑1 (MQ=255) cGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTtccggcgt > 2:239061/1‑150 (MQ=255) aTGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTtccggcgtat < 1:31624/150‑1 (MQ=255) gAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTTACGGTTGTAAATCCGATTAATAATACAGATAACCGCAGAAGCGAATACCTTAACCGTGAATTGTTGCGTTTAATtacggcgtatac > 1:361414/1‑148 (MQ=255) aGTTACGTATCAGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCTACG‑TTTTTTTTGAAGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAACCGATAAACTTCAAAGTGAATGGTGGCGATGATTtccgccgtaaccg > 1:1449953/1‑150 (MQ=255) gTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTtccggcgtatccgg > 1:546167/1‑150 (MQ=255) gTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTtccggcgtatccgg < 1:68289/150‑1 (MQ=255) ttACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTtccggcgtatccggc < 2:369620/150‑1 (MQ=255) tACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTtccggcgtatccggcg > 2:77456/1‑150 (MQ=255) cGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTtccggcgtatccggcgta > 1:1367437/1‑150 (MQ=255) tATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGa > 2:1664922/1‑150 (MQ=255) aTCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCCCCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGAt > 1:786650/1‑150 (MQ=255) aTCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGAt < 1:640274/150‑1 (MQ=255) aTCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGAt > 1:1693592/1‑150 (MQ=255) aTCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGAt > 2:476390/1‑150 (MQ=255) cTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTGCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTc > 2:1565731/1‑150 (MQ=255) cTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTc > 2:896794/1‑150 (MQ=255) gAAATAAGGTTGAAAAATTAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCATGCGTATCCTGCGTAGATTCGaa < 2:241534/150‑1 (MQ=255) gAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGaa < 1:1173713/150‑1 (MQ=255) tAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGt > 1:1314906/1‑150 (MQ=255) aaGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TGTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGATTGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGATATGtt > 1:494946/1‑150 (MQ=255) tggTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGttt < 1:756113/149‑1 (MQ=255) aGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGATGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGtt > 2:218501/1‑150 (MQ=255) aGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCGTTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTACAACGTGAATGGTGGAGATGATTTCCGGCGTATCCGGGGGAGATGCGAAATGtt > 2:213279/1‑150 (MQ=255) tGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGa > 2:336571/1‑150 (MQ=255) aaaTAAACACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATAc < 1:668050/150‑1 (MQ=255) aaaTAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATAc < 2:455363/150‑1 (MQ=255) aaaaaaaaCGGCGCTTTTTAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATAcg > 1:984350/4‑150 (MQ=255) aaTAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATTATTTCCGGCGTAACCGGCGTAGATACGAAATGTTTACGAATAcg > 2:1374401/1‑150 (MQ=255) aaTAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATAcg < 2:1416730/150‑1 (MQ=255) tAAAAACGGCGCTAAAAAGCGCGG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTAGAAATGTTTACGAATAcggc > 2:1216013/1‑150 (MQ=255) aaaaCGGCGCTTTTTAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATAcggcgg > 2:1569905/1‑150 (MQ=255) aaaaCGGCGCTAAAAAGCGCCG‑TTCTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGAGGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATAcggcgg < 1:1120041/150‑1 (MQ=255) aaaCGGCGCTTTTTAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGa > 1:1100512/1‑150 (MQ=255) aaCGGCGCTTTTTAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGAt > 2:799541/1‑150 (MQ=255) cGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCg < 2:1430832/150‑1 (MQ=255) cGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGCGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCg > 1:794962/1‑150 (MQ=255) cgcTAAAAAGCGCGG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCa < 1:1546709/150‑1 (MQ=255) cgcTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACAAATACGGCGGATCGTCa < 2:505095/150‑1 (MQ=255) cTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACg > 2:344445/1‑150 (MQ=255) | CTGGTGGTGGCGCTGGCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAAGGTTGAAAAATAAAAACGGCGCTAAAAAGCGCCG‑TTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACG > NC_000913/4639405‑4639701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |