| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 25,781 | T→A | 6.6% | intergenic (+80/‑45) | lspA → / → fkpB | prolipoprotein signal peptidase (signal peptidase II)/FKBP‑type peptidyl‑prolyl cis‑trans isomerase (rotamase) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 25,781 | 0 | T | A | 6.6% | 400.0 / 12.5 | 135 | intergenic (+80/‑45) | lspA/fkpB | prolipoprotein signal peptidase (signal peptidase II)/FKBP‑type peptidyl‑prolyl cis‑trans isomerase (rotamase) |
| Reads supporting (aligned to +/- strand): ref base T (67/59); new base A (2/7); total (69/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.18e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
Only 100 of 136 total aligned reads displayed.
TGCCATCTGTGTCGGTGCGGCACTGATTGTGCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGCAACAACGGTAAAC > NC_000913/25632‑25925 | tGCCATCTGTGTCGGTGCGGCACTGATTGTGCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGttt > 1:478480/1‑150 (MQ=255) tgtgTCGGTGCGGCACTGATTGTGCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTAcgccgc < 1:1699978/150‑1 (MQ=255) tCGGTGCGGCACTGATTGTGCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATcc < 2:1498243/150‑1 (MQ=255) tGCGGCACTGATTGTGCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATGCG‑‑GCGTAAACGCCTTATCCGGcc < 1:523646/150‑2 (MQ=39) ggCACTGATTGTGCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGTGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATGCG‑‑GCGTAAACGCCTTATCCGGcctac < 2:961893/150‑5 (MQ=255) ggCACTGATTGTGCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCTAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCaaaa > 1:1183555/1‑150 (MQ=255) aCTGATTGTGCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATc > 1:333242/1‑150 (MQ=255) aCTGAATGTGCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGACTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATc < 2:1117144/150‑1 (MQ=255) aTTGTGCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTa < 1:1554914/150‑1 (MQ=255) gCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAatat > 2:1694093/1‑150 (MQ=255) gCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAatat > 1:661948/1‑150 (MQ=255) gCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAatat > 1:1011245/1‑150 (MQ=255) cTGGAAGGTTTTTTGCCTTCTACACCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACCCATCTTATCCGGCCTACAGATTGCTTCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCATAAAtata > 2:1256737/1‑150 (MQ=37) tGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATaa > 1:417439/1‑150 (MQ=255) tGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATaa > 2:1173365/1‑150 (MQ=255) ggAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAag > 1:1350155/1‑150 (MQ=255) ggAAGGTTTTTTGACTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAag < 1:742794/150‑1 (MQ=255) gAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGTCGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTaaa > 2:1152459/1‑143 (MQ=255) gAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGTCGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTaaa < 1:1152459/143‑1 (MQ=255) gAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGTCGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTaaa < 1:1186562/143‑1 (MQ=255) gAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGTCGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTaaa > 2:1186562/1‑143 (MQ=255) aaGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAagag < 2:112855/150‑1 (MQ=255) ggTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCa < 1:1484450/150‑1 (MQ=255) gTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCaa > 1:1429347/1‑150 (MQ=255) tttttGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAAc < 1:447299/150‑1 (MQ=255) gCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCa > 1:967578/1‑150 (MQ=255) gCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCa < 2:139712/150‑1 (MQ=255) ccTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCAt > 1:1587431/1‑150 (MQ=255) cTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATg < 2:463114/150‑1 (MQ=255) tAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTg < 2:538230/150‑1 (MQ=255) agCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAAt > 2:20467/1‑150 (MQ=255) agCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGAATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTATATATAAGAGCAAACCTGCATGTCTGAAt < 1:561555/150‑1 (MQ=255) cGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCt > 2:1067159/1‑150 (MQ=255) cGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCt > 1:582288/1‑150 (MQ=255) aaaaaaCAATAATAAACCCTGCCGGATGCGATGCTGACTCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGt < 2:208510/150‑1 (MQ=255) aaaaaaCAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGt > 1:933098/1‑150 (MQ=255) aaaaaCAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTa < 1:390743/150‑1 (MQ=255) aaaaaCAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTa < 2:1709610/150‑1 (MQ=255) aaaaaCAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTa < 1:384404/150‑1 (MQ=255) aaaaCAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTAc > 2:539084/1‑150 (MQ=255) aaaCAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAATCCTGCATGTCTGAATCTGTACa < 2:1456178/150‑1 (MQ=255) aaCAATAATAAACCCTGCCGTATGCGATGCTGACGCATCTTATACGTCCTACAGATTTCTGAGAAATCGTAGTCCGGATAAG‑‑TCGTTTTCGCCGCATACGGCAAAAATCCTTAAATATATGAGCAAACCTGCATGTCTGAATCTGTACag < 1:424327/150‑1 (MQ=255) aaCAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCGGGCCGACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAACTCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACag < 2:865071/150‑1 (MQ=255) cAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAAGCTGCATGTCTGAATCTCTACagag > 1:265793/1‑150 (MQ=255) cAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACagag > 2:1621316/1‑150 (MQ=255) cAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATGGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAACGCCTTAAATATAAGAGCACACCTGCATGTCTGAATCTGTACagcg > 1:1662312/1‑148 (MQ=255) aaataatAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACagag < 2:1415606/149‑1 (MQ=255) ataataAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATAGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGACCAAACCTGCATGTCTGAATCTGTACAGAGCa > 2:1384366/1‑150 (MQ=255) taataaACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCaa > 1:1326678/1‑150 (MQ=255) taaACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GAGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAg > 2:779049/1‑150 (MQ=255) ccTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCg < 2:1295697/150‑1 (MQ=255) cGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTg > 2:912787/1‑150 (MQ=255) atgcgatgcTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTg < 2:310211/150‑1 (MQ=255) tgcgatgcTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACGGAGCAATAGCGCCGTCCTGGTGc < 1:1341638/150‑1 (MQ=255) cgatgcTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAGACCTGCATGTCTGAATCAGTACAGAGCAATAGCGCCGTCCTGGTGCag > 1:1072115/1‑149 (MQ=255) cgatgcTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCAc > 2:1393170/1‑150 (MQ=255) tgcTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGGTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTc < 2:117298/150‑1 (MQ=255) gcTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTcc > 1:711120/1‑149 (MQ=255) cTGACGCAGCTTATCCGGCCTACAGATTGCTGCGATATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCACACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCAc < 1:1297020/150‑1 (MQ=255) tGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACg > 1:512388/1‑150 (MQ=255) tGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACg < 2:1394189/150‑1 (MQ=255) aCGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCt < 1:1447489/150‑1 (MQ=255) aTCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTaaaa > 1:764315/1‑150 (MQ=255) tCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTcgac < 2:1587431/150‑1 (MQ=255) tCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTcgac < 1:868930/150‑1 (MQ=255) ccGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTcgacg < 2:1462942/150‑1 (MQ=255) ccGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTcgacg < 2:1447938/150‑1 (MQ=255) ccGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTcgacg < 1:1021485/150‑1 (MQ=255) ggCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGAt > 2:1008820/1‑150 (MQ=255) gCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCCCTTCACGCTAAAACTCGACGATg > 2:319688/1‑150 (MQ=255) gCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATg > 1:1157569/1‑150 (MQ=255) ccTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATgg < 1:1694093/150‑1 (MQ=255) cAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGcacc < 2:394006/150‑1 (MQ=255) aGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGcacca < 2:47412/150‑1 (MQ=255) aGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGcacca > 2:189221/1‑150 (MQ=255) ctgcGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCTTGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCCCGCTAAAACTCGACGATGGCACCAccgccg > 1:1511882/1‑150 (MQ=255) gcGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATgg < 1:1658899/137‑1 (MQ=255) gcGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATgg > 2:1658899/1‑137 (MQ=255) gcGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAg < 1:1173365/150‑1 (MQ=255) gAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGGCGGTGGTGCCATCGTCGAGtt > 2:1496074/1‑149 (MQ=38) aatctgTAGGCCGGATAAGATGCGTCAGCATCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGt < 1:713149/145‑1 (MQ=37) aaTCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTa < 2:1350155/150‑1 (MQ=255) aTCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGGCGGTGGTGCCATCGTCGAGtttta < 1:1496074/150‑5 (MQ=38) tCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTAcc < 2:1429347/150‑1 (MQ=255) gTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCg < 1:1562467/150‑1 (MQ=255) tgCCGGATGCG‑‑GCGTAAACGCCTTATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTAGACGATGGCAACACCGCCGAGTCTACCCGcaa > 2:1629373/2‑150 (MQ=255) ggCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCCCCGCCGAGTCTACCCGcaa > 1:510786/1‑150 (MQ=255) gCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCTCCTCCGCCGAGTCTACACGcaac > 1:228726/1‑150 (MQ=255) gCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGcaac < 1:176852/150‑1 (MQ=255) ccGGATGCG‑‑GCGTAAACGCCTTATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGcaac > 2:669712/1‑149 (MQ=255) cGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGcaacaa > 2:636707/1‑150 (MQ=255) cGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTATGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGcaacaa > 2:630764/1‑150 (MQ=255) ggATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGCaacaac > 1:129463/1‑150 (MQ=255) ggATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGCaacaac < 1:1393170/150‑1 (MQ=255) ggATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGCaacaac > 2:640696/1‑150 (MQ=255) tAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCt < 1:1148084/135‑1 (MQ=255) tAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGCAACAACGGt < 1:1709947/150‑1 (MQ=255) aaG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGCAACAACGGTa < 1:481763/150‑1 (MQ=255) g‑‑gCGTTTATGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGCAACAACGGTaaa > 2:1480911/1‑150 (MQ=255) gCGTTTACGCCGCATCCGTCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGCAACAACGGTAAAc < 2:582288/150‑1 (MQ=255) | TGCCATCTGTGTCGGTGCGGCACTGATTGTGCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAATAAACCCTGCCGGATGCGATGCTGACGCATCTTATCCGGCCTACAGATTGCTGCGAAATCGTAGGCCGGATAAG‑‑GCGTTTACGCCGCATCCGGCAAAAATCCTTAAATATAAGAGCAAACCTGCATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGCAACAACGGTAAAC > NC_000913/25632‑25925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |