| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 985,854 | A→T | 7.2% | intergenic (‑145/+40) | aspC ← / ← ompF | aspartate aminotransferase, PLP‑dependent/outer membrane porin 1a (Ia;b;F) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 985,854 | 0 | A | T | 7.2% | 249.3 / 6.4 | 90 | intergenic (‑145/+40) | aspC/ompF | aspartate aminotransferase, PLP‑dependent/outer membrane porin 1a (Ia;b;F) |
| Reads supporting (aligned to +/- strand): ref base A (44/38); new base T (2/4); total (47/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.37e-01 | |||||||||||
AACATGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTT > NC_000913/985705‑986003 | aaCATGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCa > 1:404942/1‑150 (MQ=255) cATGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCaaa > 2:198076/1‑150 (MQ=255) aTGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAg < 1:691876/150‑1 (MQ=255) tGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGt > 2:1528948/1‑150 (MQ=255) tGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGt > 1:1685205/1‑150 (MQ=255) gACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTATAAAAAAAAACAGGACCAAAGt > 1:1565947/1‑150 (MQ=255) aCGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTcc < 1:962661/150‑1 (MQ=255) gatgTTCCATTATGGTTACAGAAGCGAAGTCCGCTATCAGGGTAACTGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTTTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTg < 1:121577/147‑1 (MQ=255) gAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTg < 1:185329/150‑1 (MQ=255) gTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACTTTGGTCCTGttt < 1:1307257/150‑1 (MQ=255) ccATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACTTTGGTCCTGtttttt < 1:81579/150‑1 (MQ=255) cATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACTTTGGTCCTGttttttt < 2:375244/150‑2 (MQ=255) aTTATGGTTACAGAAGGGAAGTCCGCTATCATGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCg < 1:232859/150‑1 (MQ=255) aTTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCg < 1:658632/150‑1 (MQ=255) ttATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCgg > 2:1417004/1‑150 (MQ=255) tGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGTGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGTCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCAt < 1:1452016/150‑1 (MQ=255) ggTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCAtt > 1:1214616/1‑150 (MQ=255) gTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGt > 2:887905/1‑137 (MQ=255) gTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGt < 1:887905/137‑1 (MQ=255) cAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACa > 1:363045/1‑150 (MQ=255) gAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACaaa > 1:117909/1‑150 (MQ=255) gAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACaaa > 2:946133/1‑150 (MQ=255) gggAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAagag < 1:520463/150‑1 (MQ=255) gAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGgt > 1:1682708/1‑150 (MQ=255) aaGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCAAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGgtg < 1:1522425/150‑1 (MQ=255) gTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTTCTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTATCAAAGAGGtgtg < 1:490448/150‑1 (MQ=255) ccGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCt > 1:955221/1‑150 (MQ=255) ccGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCt > 1:1665153/1‑150 (MQ=255) ccGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCt > 2:1186958/1‑150 (MQ=255) gCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGAAGGATGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCGTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTAt > 1:851321/1‑150 (MQ=255) tATCAGTGTAACGGGAGATTTACAAAAATCCAACTATAACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTa < 2:209792/150‑1 (MQ=255) tATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCGAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTa < 2:542100/150‑1 (MQ=255) tATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTa > 2:1572239/1‑150 (MQ=255) aTCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGTAGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAg < 1:151521/150‑1 (MQ=255) aGGGTTACTGTAGATTTACAAAATTCCAACTATTACTGATGAAAACGCTGGCTTTTTTTGCAAGACGTGAGTTTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAAc < 2:340753/150‑1 (MQ=255) aGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAAc < 1:198076/150‑1 (MQ=255) ggTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTg > 2:1129238/1‑150 (MQ=255) gTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTATCAAAGAGGTGTGCTATTAGAACTgg > 1:1551034/1‑150 (MQ=255) gTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTgg < 2:637433/150‑1 (MQ=255) gTAAAGGGAGATTTTCAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTTGAAGGGAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTgg < 2:302338/150‑1 (MQ=255) ttaCGGGAGTTTTTCAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAAGAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGt < 1:1239840/148‑1 (MQ=255) ggAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGgtg < 2:1465033/129‑1 (MQ=255) ggAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGgtg > 1:1465033/1‑129 (MQ=255) ggAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCGGCTTTTGCAAGCCGGGAGATTGCTCTGGAAGGTAT‑AAAAAAAACACGCCCAAAGTCCTGTTTTTTCGGCATTTAACAAAGCGGCGTGCTATTAGAACTGGTAAACg < 2:1169644/150‑1 (MQ=255) aTTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATAc < 1:1417004/150‑1 (MQ=255) tACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCca < 2:1230494/150‑1 (MQ=255) cAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCcaca > 2:1697129/1‑150 (MQ=255) aaaaTTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAg > 2:1534912/1‑150 (MQ=255) aaaTTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGc > 1:635002/1‑150 (MQ=255) aTTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCaa < 1:946133/150‑1 (MQ=255) aCTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGgtgt < 1:1528948/150‑1 (MQ=255) aCTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGgtgt > 1:935888/1‑150 (MQ=255) cTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTgtc > 2:490716/1‑150 (MQ=255) tATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTgtcg < 2:955221/150‑1 (MQ=255) gatgaAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAAc > 1:1066458/1‑150 (MQ=255) aaCGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGaa < 1:1213512/143‑1 (MQ=255) aaCGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTAGTCTGaa > 2:1213512/1‑143 (MQ=255) cGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGccc > 2:773086/1‑150 (MQ=255) cAGGCTGTTTTTGCAAGCCGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATAAGAACTGCTAAACGATACCCACAGAAAAGGTGTCGTCTCAACCTACGGCCAg > 1:1611113/1‑150 (MQ=255) ctctttttGCATGACGTGAGATTGCTCTGGAAGGAAT‑AAAAAAAACAGGACCACAGTCCGGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTttg < 1:1091109/147‑1 (MQ=255) cTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTttg < 1:566665/150‑1 (MQ=255) tttGCATGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTc < 2:1123930/150‑1 (MQ=255) ttGCAAGTCGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCa < 1:1350407/150‑1 (MQ=255) tgtaaGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAg < 2:1570889/147‑1 (MQ=255) gCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTAGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGACCCTACGCCCAGTTTGTTGTCAGa > 2:1001354/1‑150 (MQ=255) aaGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTAAGCCCAGTTTGTTGTCAGAAt > 1:1002161/1‑150 (MQ=255) aGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATc < 2:802193/150‑1 (MQ=255) gaTTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGt > 1:590974/1‑150 (MQ=255) ctctGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTtgatg > 2:746964/1‑150 (MQ=255) ctctGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTtgatg > 2:1353705/1‑150 (MQ=255) ctctGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTtgatg < 2:635002/150‑1 (MQ=255) ctctGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTtgatg > 2:265323/1‑150 (MQ=255) ctctGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGATATTAGAACTGGTAAAAGATACCAACAGCAACGGTGTCGTCTGAACCTACGCCAAGTTTGTTGTCAGAATCGATCTGGTtgatt > 2:1598679/1‑149 (MQ=255) tctGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTtgatga < 2:117909/150‑1 (MQ=255) ctGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTgatgat > 2:242133/1‑150 (MQ=255) gAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTa > 1:1712227/1‑150 (MQ=255) gTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGTATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCa > 1:887291/1‑150 (MQ=255) gTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCa > 1:1543227/1‑150 (MQ=255) tat‑aAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCaa > 1:1247470/1‑150 (MQ=255) at‑aAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAAc < 1:488018/150‑1 (MQ=255) at‑aAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAAc < 2:404942/150‑1 (MQ=255) gccgaaaaaaCAGGACTTTGGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGtt > 2:149550/5‑135 (MQ=255) gccgaaaaaaCAGGACTTTGGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGtt < 1:149550/131‑1 (MQ=255) ccgaaaaaaCAGGACTGTGGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACa > 1:1305977/4‑150 (MQ=255) aaaaaaaaCAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATAAACACAGCAACAGTGACGTCTGAACCTACGCCAACTATGTAGTCAGAATCGATCTGCTTAATTATGAAGTCAACAt > 2:1257451/1‑150 (MQ=255) aaaaaaaCAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATa > 2:1710536/1‑150 (MQ=255) aaaaCAGGACTTTGGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATTATGTAGTCAACATAGGt > 1:1703146/1‑150 (MQ=255) aaCAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTgg < 1:490716/150‑1 (MQ=255) ggACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACAt > 1:396296/1‑150 (MQ=255) aCCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGt > 2:753067/1‑150 (MQ=255) ccAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGatgatg < 2:337759/127‑1 (MQ=255) ccAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGatgatg > 1:337759/1‑127 (MQ=255) aaaGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGtttt < 1:1572239/150‑1 (MQ=255) aaaGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGtttt < 2:1066458/150‑1 (MQ=255) | AACATGACGAGGTTCCATTATGGTTACAGAAGGGAAGTCCGCTATCAGGGTAACGGGAGATTTACAAAATTCCAACTATTACTGATGAAAACGCAGGCTGTTTTTGCAAGACGTGAGATTGCTCTGGAAGGTAT‑AAAAAAAACAGGACCAAAGTCCTGTTTTTTCGGCATTTAACAAAGAGGTGTGCTATTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGATGATGTAGTCAACATAGGTGGACATGTTTT > NC_000913/985705‑986003 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |