| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,106 | G→C | 6.7% | intergenic (+89/‑109) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,106 | 0 | G | C | 6.7% | 1441.4 / 14.2 | 425 | intergenic (+89/‑109) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base G (246/142); new base C (32/4); total (279/146) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.55e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 427 total aligned reads displayed.
GGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAA > NC_000913/3780957‑3781254 | tGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAATGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGTGTGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCActc < 1:10583259/150‑1 (MQ=255) gTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCttt < 2:10049546/150‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTTCGCCCCCACACCCGAAACCACAACCGCACGGGGAGGGGGCCGGTGGGCGCGGTATGTTAAACCACACACAG‑AAAAGACACCCCAcaatatt > 2:4524272/1‑144 (MQ=255) aaaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCttttt < 1:8522990/150‑1 (MQ=255) aaaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCttttt < 1:5272441/150‑1 (MQ=255) aaaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCttttt < 2:8325420/150‑1 (MQ=255) gagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTtc < 2:10543348/150‑1 (MQ=255) agTTGCCTGCGGCACTGGCTCCCATGGCGAATGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCCGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTtct < 1:2909977/150‑1 (MQ=255) agTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTtct < 2:3429697/150‑1 (MQ=255) gTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTtctc < 2:7121937/150‑1 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTcc < 2:2350600/150‑1 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTcc < 2:4216670/150‑1 (MQ=255) gCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCt < 1:983695/150‑1 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCCCACCCAAAACCACACCCGCAGGGGGGGGGGGCCCGTAGGCGCGGTATTTACTCCCACACACAG‑GAAAGAAAACCCACACattttttataccac > 2:8764365/1‑143 (MQ=255) cTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCg < 1:1109938/150‑1 (MQ=255) tGCGGCACTGGCTCCCATGGCGAACGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGc < 1:4146262/150‑1 (MQ=255) gCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCGAACCCTCACCCTCAGGGGGAGGGGCCCGTTCGGCGCGGTGTGTAATACCTCACACTG‑AAACCACACCGCACACTTTTTTTATACCTCGCCCCt > 2:8135530/1‑150 (MQ=255) gCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCGAAACCACTACCAAAGGGAGAGGGGACCCTTCGGCGCGGTATGTACACCCACACACTG‑AAAACACAACCCACACATTTTTTATCCCTCGcccca > 2:1638660/1‑149 (MQ=255) cACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCACCCCAAACCACGACCCCAGGGCGAGGGGCCCCGTCGGCGCGGTGTGGTCAACCACACAAAG‑GAACCACACCCCACCCTTTTTTTATACCAcccccccc > 1:9585930/1‑148 (MQ=255) cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCg < 1:8733458/150‑1 (MQ=255) ggCTCCCATGGCGTAAGGTAATGCGTCATCGTCGTTTGCGCCCCCTCACACTAACCCTCTCCCTCAGGGTGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 1:7412108/150‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 2:5199676/150‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCACCCTAAACCACAACCACAGGGGGAGGGGACCCGTAGGCGCAGTATGTAATCCCACACACAT‑AAAAGAAACCCCCCACTTTTTTTATACCGCGCCCCACCcgg > 2:1391161/1‑150 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCACACCCAAAACCACACCCACCCGGCGAGGGGGCCCGTAGGCGCAGTATGTAAAACCGCACACAG‑AAAACAAACCCCACCCATTTTTTGTACCACCCCCCACCcgg > 1:9678913/1‑150 (MQ=255) cTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGga < 1:10411914/150‑1 (MQ=255) tCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgag < 2:5664048/150‑1 (MQ=255) cccATGGCGAAAGGGATTGGGGCATAGTCTTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGTGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgaga < 1:8839505/150‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGTCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag < 1:2033629/150‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAACCCTCTACCGCAGGGGGAGGGGCCCCGTCGGCGCGGTGTGTACTCCCGCACCCTG‑AAACGACACCCCACACATTTTTTCTCCCGCGCCCCTCCGGGGcgag > 2:1792802/1‑150 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCGAAACCACGACCAAACGGAGAGGGGGCCCGTCGGCCCCGTTTTTGAACCCGCACCCAG‑AAACCACCCCCCACGCGTTTTTTGGCCCACCCCCCCCCggggcggg > 2:7833402/1‑146 (MQ=255) cATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCTCCCCGGAGGGGCGAgg < 2:5469103/150‑1 (MQ=255) cATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCTCCCCGGAGGGGCGAgg < 1:10805506/150‑1 (MQ=255) agggCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAggg < 1:10026818/148‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCTCCCCGGAGGGGCGAggg < 1:660664/150‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCCAACCCAAACCCGAACGGAGAGGGGCCCCTTGCGGGCTGTTATTAAAACCACAAAAAT‑AAACGACACCCCACACTTTTTTTAACCCAACCCCCGCCCGGGAGAggg > 2:5806927/1‑150 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCAACCAAAACCACAACCCCAGGGGGGGGGGGCCCGTAGGCGCGGTATGTTCTCCCACCCACAGTAAACAAAACC‑CACCCTTTTTTTATCCCACCCCCCACCCGGGCGAggg > 2:3604527/1‑150 (MQ=255) ggCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGcc < 1:4308049/150‑1 (MQ=255) gCGAATGGGAATGCGGCATAGTCTTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCg < 1:6034055/150‑1 (MQ=255) gCGAAAGGGAATGCGGCATAGTCGTTTTCGCCCCCACACCCAAACCCACTACCACAGGGAGAGGGGGCCCTTCGGCGCGGTATTTACACCCACACTCAG‑AAAACACACCCCACACATTTTTTATCCCACGCCCCACCGGGGAGAGGGCCg > 2:2756240/1‑150 (MQ=255) cGAAAGGGAATGCGGCATAGTCGTTTTCGCCCCCGCCCCCAAAACCACGACCACAGGGCGAGGGGGCCCGTGGGCGCGGTTAGTACGCCCCCACGCAG‑GAACCACACCCCCCACGTTTTTTATCCCGCGCCCCTCCCGGGGGGGGGGCgg > 2:10347329/1‑150 (MQ=255) cGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg < 1:5004710/150‑1 (MQ=255) cGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCCG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg < 1:9232516/150‑1 (MQ=255) cGAAAGGGAATGCGGCAGAGTCGTTTGCGCCCCCTCCCCCTCACCCTCTCCCGCAGGGAGAGGGGACCGTTCGGCGCTGTATGGACTCCCTCACTCTG‑AAACGACACCGCACGCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg < 1:3243064/150‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCAAACCCACACCCTCCGGGAGAGGGGACCCGTCGGCGCTGTAAGTACTCCCTCACACTG‑AAACGACACCGCACGATTTTTTTAACCCACGCCCCGCCGGGGAGTGGGCCcggg > 2:6451395/1‑150 (MQ=255) aaGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCGAACACACGACCGCAGGGGGGGGGGGCCGGTCGGCGCGGGTTGTTCTCCCACCCTCTG‑AAAACACACCCCCCGCGTTTTTTATACCAACCCCCACCCGGGCGcggggcggggg > 2:500208/1‑149 (MQ=255) gggACTGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGa < 1:8990538/150‑1 (MQ=255) gggAATGCGGCATTGTCGTTTGCGCCCCCTCACCCTAACCCTCCCCCTCCGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGa < 1:5454222/150‑1 (MQ=255) ggCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaaa < 2:10636528/150‑1 (MQ=255) ggCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaaa < 2:2579201/150‑1 (MQ=255) gCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAg < 2:6215651/150‑1 (MQ=255) tttGCGCCCCCACACCCTAAACCTCACCCACAGGGAGAGGGGACCGTTCGGCGCTGTATGTAAACCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTATGCCTCGCCCCACCGGGGGGAGGGCCGGGGTGGGGGGAAAAGGCCGCAcgg > 2:1929882/1‑148 (MQ=255) tGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCt > 2:4750055/1‑150 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAc > 2:3821872/1‑150 (MQ=255) cccccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAcc > 1:7601160/1‑150 (MQ=255) cTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTGTGTTCTCCCTCACTCTG‑AAACGTCCCCGCAGTCTGTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGACGGGGCCGCACTGCGCAcccagg > 2:8970338/1‑146 (MQ=255) aCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTc > 1:862902/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 2:761241/1‑150 (MQ=255) tAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCt > 2:1480222/1‑150 (MQ=255) cccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGGGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 2:7779286/1‑150 (MQ=255) ccTCTCCCTGAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc > 1:3787593/1‑150 (MQ=255) ccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc > 1:7773672/1‑150 (MQ=255) ctctCCCTGAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAGAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 2:9902392/1‑150 (MQ=255) ctctCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTtctc > 2:10899735/1‑79 (MQ=255) tctcCCTCAGGGAGAGGGTACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg > 1:7028813/1‑150 (MQ=255) tctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg > 1:3489690/1‑150 (MQ=255) ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGCAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc > 2:7485891/1‑150 (MQ=255) cggttgtggggACCGTTCGGCGCTTTATTTACTCCCTCACTCTG‑AAACGACACCCCACTCTTTTTTTCTCCCTCGCCCCGCGGGGGTGGGGGCGGGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCa < 2:9131210/143‑1 (MQ=255) agagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTaa > 1:5910858/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 1:5527982/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 1:1728308/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 1:5739597/1‑150 (MQ=255) gACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc > 2:8597520/1‑150 (MQ=255) cGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGt > 1:826168/1‑150 (MQ=255) cGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGt > 2:6823998/1‑150 (MQ=255) cGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGt > 1:2981869/1‑150 (MQ=255) ttCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt > 2:31224/1‑150 (MQ=255) ggCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCt > 1:4808796/1‑150 (MQ=255) cgcTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa > 1:8890072/1‑150 (MQ=255) tCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt > 1:2887198/1‑150 (MQ=255) ccTCACTCTG‑AAACGACGCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 2:794789/1‑150 (MQ=255) ccTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 1:4484778/1‑150 (MQ=255) ccTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 1:2578131/1‑150 (MQ=255) ccTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 2:4316436/1‑150 (MQ=255) cTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACAGCGTACTTTACg > 1:6401944/1‑150 (MQ=255) tCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCTTACTTTACGa > 1:10148678/1‑150 (MQ=255) tctG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCa > 1:3392621/1‑150 (MQ=255) tctG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCa > 2:1174083/1‑150 (MQ=255) ctG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAg > 1:2339987/1‑150 (MQ=255) tG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGa > 1:9377818/1‑150 (MQ=255) g‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTCTGCTAAACATCGTACTTTACGAACCAGaa > 2:5298924/1‑150 (MQ=255) g‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaa > 2:8500091/1‑150 (MQ=255) aaaCGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaaa > 1:4355562/1‑150 (MQ=255) cGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTc > 2:10154671/1‑150 (MQ=255) gACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTcc > 1:5817264/1‑150 (MQ=255) acCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGcc > 1:1188319/1‑150 (MQ=255) acCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGcc > 2:9375620/1‑150 (MQ=255) ccGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCa > 2:6973855/1‑150 (MQ=255) ccGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCa > 1:2741370/1‑150 (MQ=255) cGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaa > 2:6045276/1‑150 (MQ=255) cGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaa > 1:8368155/1‑150 (MQ=255) | GGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAA > NC_000913/3780957‑3781254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |