| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 164,579 | G→C | 5.1% | intergenic (+45/‑151) | hrpB → / → mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 164,579 | 0 | G | C | 5.1% | 820.6 / 2.4 | 256 | intergenic (+45/‑151) | hrpB/mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
| Reads supporting (aligned to +/- strand): ref base G (102/138); new base C (4/12); total (106/150) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 264 total aligned reads displayed.
TACCGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAA > NC_000913/164430‑164727 | tACCGTGTGGTGCAAAAAGAGATGAATGGGCGTTAGCCCAAACATGTCGGGCGGGACGACCCGGCAAATAGTGCACCGAGGCGACGGACGAAAAAGTATTCGTACGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAggg < 2:966357/150‑1 (MQ=38) cggTGAGGTGCAAAAAGAGATGAACGGGCGTTATCCCAAACCTGTCTGGCCGGACGACCCGGAAAATACTGCACCGACGCGACGGACGAAAAAGTTTTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCa < 2:51897/148‑1 (MQ=255) ccGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCa < 2:51806/150‑1 (MQ=255) ccGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCa > 2:8515143/1‑150 (MQ=255) gTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATc > 1:3840441/1‑150 (MQ=255) gTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATc > 1:6543634/1‑150 (MQ=255) gTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAgcgc > 1:7764147/1‑150 (MQ=255) gCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCgcgcgc > 1:5380533/1‑150 (MQ=255) agagATGAACGGGCTTTATCCCAAACTTGTCTGGCGGGACGACCCGGCAAATACTGCACCGACGCGAGGGACTAAAATGTATTCGTATGTTTGGTTTTCGCCCTCGCCCTGTGGGAGTGGGCCGGGGTGCGGGCATCAGCGCGCACGTtc < 2:8910086/150‑1 (MQ=255) agaTTAAAGGGGGTTACCCCAAACTGGTGGGGCCGGACGACCCGCCAAATACTCCCCGGACGCGACGGACTAAAATGTATTCGTATGGTTGTTTTTCTCCCTCTCCCTGTGGGTGTGGGCCGGGGTGCGGGCATCAGCGCGCACGTtcac < 2:476279/150‑1 (MQ=255) tattaatgggCTTTAACCAAAACCTGTCGGGCGGTACGACCCGGAAATTACTGCCCCGACGCGAGTTAATAAAATTTTTTCTTATGGTTGTTTTTCCCCCTCCCCCTGTGGTTTGGGGCGGGGTTGCGGGCATCAGCGCGCACGTtcacc < 2:3142937/143‑1 (MQ=255) gaTGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGtgggcc > 1:9568471/1‑145 (MQ=255) gAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTtcaccctc > 2:7958573/1‑150 (MQ=255) gAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGGtcacccac > 2:6443624/1‑148 (MQ=255) atgggCTTTAACCCAAACTGGTCGGGCCGGACGACCCGGAAAATACGGCACCGACGCTACGGACGAAAATTTATTCGTATGGTTGGTTTTCTCCCTCGCCCTGTGGGAGTGGGCGGGGGTGAGGGCATCAGCGCGCACGTtcaccctcac < 2:709183/148‑1 (MQ=25) aaGGGCGTTATCCCAACCTGGTCTGGCCGGACGACCCGTCAAATCCTGCACCGACGCGACGGACGAAAATTTATTCGTATGGTTGGTTTTCTCCCTCTCCCTGTGGGTGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTtcaccctcac < 2:617059/150‑1 (MQ=37) aaGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTtcaccctcac > 1:10883788/1‑150 (MQ=255) tgggCGTTAGCCCAAACATGGCTGGCCGGACGACCCGGCAAATCCTGCACCGACGCGACGGACGAAAATGTTTTCTTATGGTTGGTTTTCTCCCTCTCCCTGTGGGTGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTtcaccctcacc < 2:4574145/149‑1 (MQ=37) gggCGTTATCCCCAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAACAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCACGGtgccccccaccc > 2:10199823/1‑150 (MQ=38) ggCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCAGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTgggcccccacccc > 1:3150405/1‑149 (MQ=38) ttATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTGACCCCCAACCaaaac > 2:240274/1‑148 (MQ=255) ttATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGCGCCCCCACCCCaaac > 2:7819694/1‑148 (MQ=255) ttATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAGCAGCGCGCACGTGGACCCACACCCCAAcc > 1:6369974/1‑150 (MQ=38) ttATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTGTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTgcacccgcccccacacc > 1:10745336/1‑145 (MQ=38) ttATCCCAAACATGTCGGGCCGCACGACCCGGAAAATACTGCACCGACGCGACGGACGAAAATGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAAcc < 2:1695908/150‑1 (MQ=255) ttATCCCAAACAGGTCTGGCCGGACGACCCGGCAAATACGGCCCCGAGGCTAGTGACTAAAATTTTTTCTTATGTTTGTTTTTCTCCCTACCCCGGTGGGTGCGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAAcc < 2:293729/150‑1 (MQ=255) taaccccAAACAGGTGGGGCCGGCCGACCCGGCAAATACTGCACCGCGGCGACGGACTAAAAAGTTTTGGTATGGTTGGTTTTCGCCCTCCCCGTGGGGGAGTGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAAcc < 2:5616464/146‑1 (MQ=255) ttccggcgcaaaagccctattttctgttcttctgttacaagacagaagaagatatctctcaaaatttgtgctcgatcggtcccctctccctggaGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCctc > 1:5770286‑M1/95‑150 (MQ=255) cccAACCTTGTGGGGCCGGACGCCCCGGCATTTCCTGCCCCGCCGCGCGGGACTAAAATTTTTTCGTATGTTTGGTTTTCTCCCTCTCCGGGGGGGTGTGGGGGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCctct < 2:6678617/150‑1 (MQ=255) ccAATCTTGGCTGGCCGGACCACCGGGAAATTCCGGCCCCTCCGCGCCGGACGAAAATGTATTCTTTGGGTTGGTTTTCGCCCTCTCCCTGGGGGTGTGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCtctc < 1:9849500/150‑1 (MQ=255) ccAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTGACCCGCACCCAAAcccacac > 1:8093122/1‑146 (MQ=255) caaccttGTCGGGCGGGACGCCCGGGCAAATCCGGCCCCGCCGCGTGGGCCGAAAATGTTTTCGTTGGGTGGGTTTTCTCCCTCGCCGTGGGGGTGTGGGCGGGGGTGTGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCtctcn < 1:10373179/144‑2 (MQ=255) cAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGGCCCCCACCCAAAacccacac > 2:7402179/1‑145 (MQ=37) cATGTCGGGCCGTCCGCCCCGCAAAAAACGCCCCCGCCGCGACGGACTAAAATTTATTCGTATGTTTGGTTTACCCCCACCCCCGGGGGTAGAGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCa < 2:2053471/150‑1 (MQ=255) ctgcgtGGCCGGACGACCCGGCAAATACGGCCCCGACGCGACGGACTAAAAAGTTTTCGTATGGTTGTTTTTCTCCCTCTCCCTGTGGGAGTGGGCCGGGGTGGGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCaa < 2:5029656/145‑1 (MQ=37) aTGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCaa < 2:2684807/150‑1 (MQ=255) tgtggggccggccGACCCGCAAAATACTCCCCCGCCGCGCGGGACTAAAAATTTTTCTTTTGGTTGGTTTTCGCCCCCGCCGTGGGGTTGGGGGGGGGGGTGGGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAg < 1:6223955/145‑1 (MQ=255) tGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCACGTGGCCCCACCCCCAAACCCCCACCCGCaccgggg > 1:9826758/1‑144 (MQ=25) gggccggccGCCCCGGCAAATACGGCCCCGCCGCGCCGGCCGAACAAGTATTCGTACGGTGGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGCGGGCCTCCGCGCGCCCGTTCACCCTCACCCTAACCCTCTCCCTTGAGGgag < 2:10037604/149‑1 (MQ=25) ggccggccTCCCCGCAAAATACTCCCCCGACGCGACTCACTAAAATTTATTGTTTTGGTGGTTTTACCCCCTCGCCGTGTGGGTGCGGGCGGGGGTGCGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTTGAGGgaga < 1:2137710/150‑1 (MQ=255) ggCCGGACCACCCGGCAAATACTGCACCTACGCGACGGACTAAAATGTTTTCGTATGGTTGTTTTTCTCCAACGCCCTGTGGGTGAGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGgaga < 2:573528/150‑1 (MQ=255) ccGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGACCCACACCCAAACCCACACCCGCCAgggggcgg > 1:5469430/1‑145 (MQ=37) acgacCCGGAAAATACTGCCCCGCGGCGACGGACTAAAATTTATTCGTATGTTTGTTTTTCTCCCTCTCCCTGTGGGTGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGAc < 2:5997348/150‑1 (MQ=255) gacCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTGGCCCGCACCCAAAACCACAACCCCAAGCGGGAGGGGCCCg > 1:8476966/1‑150 (MQ=25) gacCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCCACCCCAAAACCACAACCACCAGGGGGAGGGGGCCg > 1:1865546/1‑150 (MQ=25) ccgtaaaaTCCTGCACCGCCGCGCGGGACCAAAACTTTTTGGTAGGGTTGGTTTGCCCCCCCCCCGTGGGGGTGCGGGCGGGGGGGCGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATc < 2:3860258/145‑1 (MQ=255) gCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCACGGGGGCCCGCCCCCAAAACCACACCCCCCAGCGAGCGGGGCCCGAACGAg > 1:683384/1‑150 (MQ=21) gCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACACCCGCACCCACGCCCGCCCGGGAGAGGGGGCCGATCGAg > 2:9814813/1‑150 (MQ=37) aaaTACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCGCACCCAAACCCACACCCACCAGGGCGAGGGGGCCGATCGAGcc > 1:4639582/1‑149 (MQ=37) cTGCCCCGCGGCGACGGACTAAAATGTAGTCGTATGGTTGGTTTTCTCCCTCCCCGGGGGGGCGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAAt < 1:702286/150‑1 (MQ=255) aagacagaagaagatatctctcaaaatttgtgctcgatcggtcccctctcccttgaGGGAGAGGGTTAGGGTGAGGGCATCAGCGCGCACGTtcacc > 1:10262255‑M1/57‑97 (MQ=255) ccgccgCGACGGACTAAAATGTTTTCGTATGTTTGTTTTTCTCCCTCTCCCTGTGGGAGTGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTga < 2:8476966/150‑1 (MQ=38) ccGACGCGACGGACTAAAAATTATTCGTATGTTTGTTTTTCTCCCTCTCCGTGGGGTCGCGGGCGGGGGTGTGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTga < 1:6056096/150‑1 (MQ=255) ccGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTga < 2:8214071/150‑1 (MQ=255) ccGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTga < 2:2789610/150‑1 (MQ=255) gacgcgacgcACTAAAATTTTTTCGTATGGTTGGTTGTCGCCCTCTCCCTGTGTGAGTGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTgaga < 1:6852931/150‑1 (MQ=255) agaagaagatatctctcaaaatttgtgctcgatcggtcccctctcccttgaGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTa > 2:1535925‑M1/52‑101 (MQ=255) agaagaagatatctctcaaaatttgtgctcgatcggtcccctctcccttgaGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTa < 1:1535925‑M1/50‑1 (MQ=255) ggacgAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCCCCCACACCCCAACCCACAACCACAAGGGACAGGGGCCCGAACGACCCCAAAATTTTGGAGATAtctt > 2:10836548/1‑150 (MQ=21) aaaaaGTATTCGTACGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATAtcttcttct < 2:10046251/150‑1 (MQ=255) aaaaaGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATAtcttcttct < 1:2686761/150‑1 (MQ=255) atgTATTCGTATGGTTTGTTTTCTCCCTCTCCCTGTGGGAGCGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTc < 1:10659855/148‑1 (MQ=255) aaGTATTCGTATGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTc < 1:7958573/150‑1 (MQ=255) gTATTCGTAAGGTTGTTTTTCTCCCACTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCtt < 2:3618661/150‑1 (MQ=255) aTTCGTATGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGt < 1:7361234/150‑1 (MQ=255) tCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGGTCACCCTCAACCGAACCCACTCCCACAAGGGAGAGGGGACCGATCGAGCACAAAATTTGAGTGATATCTTATTCTGTGTTGTaa > 1:1001509/1‑150 (MQ=37) gtttggttgtttTTCTCCCTCTCCCTGGGGGTGTGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACa < 2:683384/146‑1 (MQ=39) cggttggttTTCCCCCTCTCCCTGTTGGAGCGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACagaa < 1:2910042/149‑1 (MQ=255) cggttggttTACTCCCTCCCCCTGGGGGAGTGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGTTATCTTCTTCTGTCTTGTAACagaa < 1:921224/149‑1 (MQ=255) aGGTTGTTTTTCGCCCTCTCCCTGTGGGTTTGGGCGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACagaa < 2:1281411/150‑1 (MQ=255) gtttggttTTCGCCCGCTCCGTGGGGGTGTGGGCGGGGGTGAGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACagaag < 2:187998/148‑1 (MQ=255) gttgtttTTCCCCCGCGCCCGGTGGGCGAGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACagaaga < 2:5155676/150‑1 (MQ=255) gttggttTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCCCACCCCAACCCGCCCCCCCAAGGGAGAGGGGGCCGCGCGAGCCCCAAATTTTAGTGATATAATCATCGGTCGTGTAAAagaaga > 2:2573804/1‑150 (MQ=18) ttggttTTCTCCCTCGCCGGGGGGGTGTGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAgaagaa < 1:9375051/150‑1 (MQ=255) ttttCTCCCTCTCCCTGTGGGAGAGGGCCGGGGGGAGGGCCTCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGa < 2:5898068/150‑1 (MQ=255) cctctccctGTGGGTGTGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCgg < 1:5600894/150‑1 (MQ=255) ctctccctGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGGTCACCCTCACCCGAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCggg < 2:9049874/150‑1 (MQ=255) ctcgccgtggGGGAGTGGGGGGGGGTGCGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCggg > 1:4144460‑M1/11‑150 (MQ=255) tccctGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCACGTGGACCCGCACCCAAACCCCCGCCCACCAGGGCGGGGGGGCCCCGCGCGCCCAAAGTGTTGGTGGTATAAAGATCTGGGGTGTAACAGAAGAACACGAAATCgggggg > 2:7910296/1‑147 (MQ=255) ctGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGCACCCACACCCGAACCCACACCCTCAAGGGAGAGGGGACCCAACGAGCACAAATTTTGAGAGATATATTCTTCTGTCGTTTAACAGAAGAAAAGAAAATCGGGCGTTTg > 2:9101082/1‑150 (MQ=255) tgtgGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGGGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTgc > 2:7051134/1‑150 (MQ=255) gggGGGAGCGGGCCGGGGTGTGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTgc > 1:1947221‑M1/4‑150 (MQ=255) ggggtgtgggCGGGGGTGCGGCCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTgcgc < 1:10086408/143‑1 (MQ=255) gGGGAGTGGGCGGGGGTGAGGCCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTgcgc > 2:2304225‑M1/2‑150 (MQ=255) ggtcgcGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGcc > 2:9552340‑M1/7‑150 (MQ=255) gtcgtGGGCGGGGGGGCGGCCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCt > 1:10563457‑M1/6‑150 (MQ=255) GGAGAGGGCCGGGGTGAGGCCATCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCt > 1:2447466‑M1/1‑150 (MQ=255) GAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTg > 2:3578751‑M1/1‑150 (MQ=255) ggCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACCCCCAAAACCACACCCGCAATGGGGAGGGGGCCGATCGAGCCCAAAATTTGAGATATATATTATTATGTCTTTTAAAAGAAGAAAAGAAAATACGGCTTTTTCGCCAGAaaat > 2:6401717/1‑150 (MQ=255) GCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCtctc < 2:2441762‑M1/50‑1 (MQ=255) gggggggCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGc < 2:3068804/149‑1 (MQ=255) gggggTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGc < 1:2324145/149‑1 (MQ=255) ggggTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 2:3382118/150‑1 (MQ=255) ggggTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 1:486328/150‑1 (MQ=255) ggggTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATACCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 1:1308967/150‑1 (MQ=255) ggggTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 2:8667172/150‑1 (MQ=255) gggTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCgg < 1:10426756/150‑1 (MQ=255) ggTGAGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGga < 1:355232/150‑1 (MQ=255) ggCCTCAGCGCGCACGTTCACCCTCACCCGACCCCTCTCCCTCAAGGGAGAGGGGACCGAGCGAGCACAAATTTTGAGAGATATCTTCTTCGGTCGTGTAACCGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGaaaaa < 2:10539784/150‑1 (MQ=255) ggCATCAGCGCGCACGTTCACTCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGATATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGaaaaa < 1:515053/150‑1 (MQ=255) | TACCGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAA > NC_000913/164430‑164727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |