| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 164,581 | A→C | 17.7% | intergenic (+47/‑149) | hrpB → / → mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 164,581 | 0 | A | C | 17.7% | 437.9 / 35.3 | 252 | intergenic (+47/‑149) | hrpB/mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
| Reads supporting (aligned to +/- strand): ref base A (90/113); new base C (9/40); total (99/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.69e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 260 total aligned reads displayed.
CCGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGC > NC_000913/164432‑164729 | cGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAt > 2:675544/1‑150 (MQ=255) gTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAgcgc > 1:7764284/1‑150 (MQ=255) gCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCgcgcgc > 1:5380533/1‑150 (MQ=255) aaaaaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACGCGGCAAATACTGCACCGACGCGACGGACGAAAATGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGGAc > 1:2024667/1‑150 (MQ=255) aaaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGt > 1:2964139/1‑150 (MQ=255) aaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGGGAGGGCCGGGGTGAGGGCATCAGCGCGCACGtg > 2:743108/1‑149 (MQ=255) agaTTAAAGGGGGTTACCCCAAACTGGTGGGGCCGGACGACCCGCCAAATACTCCCCGGACGCGACGGACTAAAATGTATTCGTATGGTTGTTTTTCTCCCTCTCCCTGTGGGTGTGGGCCGGGGTGCGGGCATCAGCGCGCACGTtcac < 2:476279/150‑1 (MQ=255) tattaatgggCTTTAACCAAAACCTGTCGGGCGGTACGACCCGGAAATTACTGCCCCGACGCGAGTTAATAAAATTTTTTCTTATGGTTGTTTTTCCCCCTCCCCCTGTGGTTTGGGGCGGGGTTGCGGGCATCAGCGCGCACGTtcacc < 2:3142937/143‑1 (MQ=255) gaTGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGtgggcc > 1:9568471/1‑145 (MQ=255) gAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCACGTtgaccccc > 1:261030/1‑148 (MQ=255) gAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTtcaccctc > 2:7958573/1‑150 (MQ=255) gAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTgcacccgc > 1:6242219/1‑148 (MQ=255) gAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGGtcacccac > 2:6443624/1‑148 (MQ=255) aaGGGCGTTATCCCAACCTGGTCTGGCCGGACGACCCGTCAAATCCTGCACCGACGCGACGGACGAAAATTTATTCGTATGGTTGGTTTTCTCCCTCTCCCTGTGGGTGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTtcaccctcac < 2:617059/150‑1 (MQ=37) gggCGTTATCCCCAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAACAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCACGGtgccccccaccc > 2:10199823/1‑150 (MQ=38) ggCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCAGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTgggcccccacccc > 1:3150405/1‑149 (MQ=38) ttATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTGACCCCCAACCaaaac > 2:240274/1‑148 (MQ=255) ttATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTGTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTgcacccgcccccacacc > 1:10745336/1‑145 (MQ=38) ttATCCCAAACATGTCGGGCCGGACGACCCGGAAAATACGGCACCGACGCGACGGACGAAAAATTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGTGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAAcc < 2:5380533/150‑1 (MQ=38) ttATCCCAAACATGTCGGGCCGCACGACCCGGAAAATACTGCACCGACGCGACGGACGAAAATGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAAcc < 2:1695908/150‑1 (MQ=255) ttATCCCAAACAGGTCTGGCCGGACGACCCGGCAAATACGGCCCCGAGGCTAGTGACTAAAATTTTTTCTTATGTTTGTTTTTCTCCCTACCCCGGTGGGTGCGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAAcc < 2:293729/150‑1 (MQ=255) ttATCCAAACCTTCTCGGGCCGCACGACCCGGCAAATACTGCACCGCCGCGCCGGACTAAAAAGTTTTCGTATGGTTGGTTTTCCCCCTCTCCCTGTGGGAGAGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAAcc < 2:5179103/150‑1 (MQ=25) aTCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCGCCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGTGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCct < 2:9004316/150‑1 (MQ=255) caaccttGTCGGGCGGGACGCCCGGGCAAATCCGGCCCCGCCGCGTGGGCCGAAAATGTTTTCGTTGGGTGGGTTTTCTCCCTCGCCGTGGGGGTGTGGGCGGGGGTGTGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCtctcn < 1:10373179/144‑2 (MQ=255) cAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGACCCACACCCCAAcccacacc > 2:8364988/1‑145 (MQ=38) aaCATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGGGAGGGCCTCAGCGCGCACGTTCCCCCACCCCCAAACCCACAccca > 1:1707669/1‑149 (MQ=38) cATGTCGGGCCGTCCGCCCCGCAAAAAACGCCCCCGCCGCGACGGACTAAAATTTATTCGTATGTTTGGTTTACCCCCACCCCCGGGGGTAGAGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCa < 2:2053471/150‑1 (MQ=255) aTGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCaa < 2:2684807/150‑1 (MQ=255) tGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGAAAGTTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAg < 2:9084564/150‑1 (MQ=255) ggtggggCGGGACGACCCGGAAAATACTGCCCCGACGCTCCGGACTAAAATTTTTTGTTATGGTTGTTTTTCTCCCTCTCCGTGGGGGTGTGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAg < 2:9255213/145‑1 (MQ=255) gtggggCCGGACGCCCGGCCAAATAGGGCCCCGACGCGCGGTCCTAAAATTTTTTGGTAGGGTTGTTTTTCCCCGTCTCCCGGGGGGTGTGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAgg < 2:3045612/146‑1 (MQ=255) gTCTGTCCGGCCGACCCGGCAAATACTGCACCGCCGCGACGGACGAAAAAGTATTCGTACGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAgg < 2:7296340/150‑1 (MQ=38) tCTGGCCGGACGACCCGGCAAATACTGCACCGACGAGACGGACGAAAAAGTATTCGTAAGGTTGGATTTCTCCCTCTCCCTGAGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACTCTCACCCTAACCCTCTCCCTCAAggg > 2:515053/1‑150 (MQ=255) tGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCACGTGGCCCCACCCCCAAACCCCCACCCGCaccgggg > 1:9826758/1‑144 (MQ=25) gggccggccGCCCCGGCAAATACGGCCCCGCCGCGCCGGCCGAACAAGTATTCGTACGGTGGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGCGGGCCTCCGCGCGCCCGTTCACCCTCACCCTAACCCTCTCCCTTGAGGgag < 2:10037604/149‑1 (MQ=25) ggccggccTCCCCGCAAAATACTCCCCCGACGCGACTCACTAAAATTTATTGTTTTGGTGGTTTTACCCCCTCGCCGTGTGGGTGCGGGCGGGGGTGCGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTTGAGGgaga < 1:2137710/150‑1 (MQ=255) ggCCGGACCACCCGGCAAATACTGCACCTACGCGACGGACTAAAATGTTTTCGTATGGTTGTTTTTCTCCAACGCCCTGTGGGTGAGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGgaga < 2:573528/150‑1 (MQ=255) gCCGGACGCCCCGCAAAATCCGCCCCCTACGCTCCGGACTAAATATTATGCGTTTGGTTGTTTTTCTCCCGCTCCGTGTGGGTGTGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGagag < 1:2387064/150‑1 (MQ=255) ccGTACGACCCGTAAAAAACTGCACCGACGCGCCGGACTAAAATGTATTCGTATGGTTGTTTTACCCCCTCCCCGTGTGGGTGCGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAgg < 2:5006582/150‑1 (MQ=255) ccGGACGACCCGGCAAATACTGCACCGACGCGACGGACTAAAAAGTATTCGTACGGTTGGTTTTCTCCCTCTCCCTGTGGGCGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTTGAGGGAGAgg < 1:9879184/150‑1 (MQ=38) ccGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGACCCACACCCAAACCCACACCCGCCAgggggcgg > 1:5469430/1‑145 (MQ=37) gacgacCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACACCCTAACCCACTCCCACAAGGGGGAggggg > 2:3662965/1‑149 (MQ=255) gacgacCCGGCAAACACTGCACCCACGCGACGCCCGACAAAGTATTCGTAAGGTTGTTTTACCCCCCCACCCGGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGa < 2:8486357/150‑1 (MQ=255) acgacCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAGCAGCGCGCACGTGGGCCCGCACCCCAACCCACACCCACAAGGGGGAgggggg > 1:10818156/1‑148 (MQ=37) acgacCCGGAAAATACTGCCCCGCGGCGACGGACTAAAATTTATTCGTATGTTTGTTTTTCTCCCTCTCCCTGTGGGTGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGAc < 2:5997348/150‑1 (MQ=255) gacCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCCACCCCAAAACCACAACCACCAGGGGGAGGGGGCCg > 1:1865546/1‑150 (MQ=25) ccGGCAAATACGGCACCGACGCGACGGACTAAAATGTATTCGTAAGGTTGGTTTTCTCCCTCGCCCTGTGGGTGAGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATc < 2:8660648/150‑1 (MQ=38) gCAAATCCGGCCCCGACGCGCCGGACGAAAAAGTATTCGTACGGTTGGTTTTCTCCCCCCCCCGGGGGGAGAGGGCCGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAg < 2:5811129/150‑1 (MQ=255) gCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCACGGGGGCCCGCCCCCAAAACCACACCCCCCAGCGAGCGGGGCCCGAACGAg > 1:683384/1‑150 (MQ=21) caaaaTCCGGCCCCGCCGCGCGGGACCAAAAATTTTTCGTAGGGTTGGTTTCCCCCCACCCCCGGGGGGTGTGGGCGGGGGTTAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAg < 1:6061820/148‑1 (MQ=255) aaaTACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCGCACCCAAACCCACACCCACCAGGGCGAGGGGGCCGATCGAGcc > 1:4639582/1‑149 (MQ=37) cacccccgcgacgGACGAAAATTTATCCTCATGGTTTTTTAACCCCCTAGCCCTGTGTTGGAGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAAtttt < 1:4045932/144‑1 (MQ=255) cACCGACGCGTCGGCCGAAAATTTATTCGTATGGTTGTTTTTCTCCCTCTCCCTGTGGGTGTGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAAtttt < 1:6568061/150‑1 (MQ=38) cACCGACGCGAGGGACGAAAAAGTTTTCGTATGTTGGGTTTTCTCCCTCCCCCTGTGGGAGTGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAAtttt < 2:7875394/150‑1 (MQ=38) aagacagaagaagatatctctcaaaatttgtgctcgatcggtcccctctcccttgaGGGAGAGGGTTAGGGTGAGGGCATCAGCGCGCACGTtcacc > 1:10262255‑M1/57‑97 (MQ=255) ccgccgCTAGGGACTAAAATGTATTCGTATTGTTGGTTTCCTCCCTCTCCGTGGGGGTGTGGGCGGGGGGGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTga < 1:8513688/150‑1 (MQ=255) ccgccgCGCGGGACTAAAATTTTTTCGTATGGTGGGTTTTCTCCCTCTCCGTGTGGGTGTGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTga < 1:7252915/150‑1 (MQ=255) cccacgcgacgCACCAAAAAGTATTCGAAAGGTTGGTTTACACCCACCCCCTGTGGCAGAGGGCCGGGGTGAGGCAATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTga < 2:8796251/147‑1 (MQ=255) gcggcgacgTACTAAAAAGTTTTCTTATGGTTGTTTTCCGCCCTCCCCCGGTGGGTGTGGGCGGGGGTGTGGGCATCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTgaga < 1:6852933/147‑1 (MQ=255) agaagaagatatctctcaaaatttgtgctcgatcggtcccctctcccttgaGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTa > 2:1535925‑M1/52‑101 (MQ=255) acgcgacgGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACACCCAAAACCACAACCACAAGGGAGAGTGGACCCAACGAGCACAAAATTTtagag > 2:2789576/1‑150 (MQ=25) ggacgAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCCCCCACACCCCAACCCACAACCACAAGGGACAGGGGCCCGAACGACCCCAAAATTTTGGAGATAtctt > 2:10836548/1‑150 (MQ=21) cgAAAAAGTATTCTTACGGTTGGTTTCCCCCCTCTCCCTGTGGCAGAGGCCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATAtcttcta < 1:5734634/150‑2 (MQ=255) aaaaaGTATTCGTACGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATAtcttcttct < 2:10046251/150‑1 (MQ=255) aaaaaGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATAtcttcttct < 1:2686761/150‑1 (MQ=255) attttttCGTTGGGTTGTTTTTCTCCCTCGCCGTGGGGGAGTGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTc < 1:637321/145‑1 (MQ=255) atgTATTCGTATGGTTTGTTTTCTCCCTCTCCCTGTGGGAGCGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTc < 1:10659855/148‑1 (MQ=255) aaGTATTCGTATGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTc < 1:7958573/150‑1 (MQ=255) gTATTCGTAAGGTTGTTTTTCTCCCACTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCtt < 2:3618661/150‑1 (MQ=255) aTTCGTATGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGt < 1:7361234/150‑1 (MQ=255) ttCGTATGGTTGGTTTTCTCCCTCTCCCTGTGGTAGTGGGCGGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTa < 1:5805344/150‑1 (MQ=255) tCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGGTCACCCTCAACCGAACCCACTCCCACAAGGGAGAGGGGACCGATCGAGCACAAAATTTGAGTGATATCTTATTCTGTGTTGTaa > 1:1001509/1‑150 (MQ=37) cggttggttTACTCCCTCCCCCTGGGGGAGTGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGTTATCTTCTTCTGTCTTGTAACagaa < 1:921224/149‑1 (MQ=255) aGGTTGTTTTTCGCCCTCTCCCTGTGGGTTTGGGCGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACagaa < 2:1281411/150‑1 (MQ=255) gtttggttTTCGCCCGCTCCGTGGGGGTGTGGGCGGGGGTGAGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACagaag < 2:187998/148‑1 (MQ=255) gttgtttTTCCCCCCCCCCCTGTGGGAGCGGGCGGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACagaaga < 2:243285/150‑1 (MQ=255) gttggttTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCCCACCCCAACCCGCCCCCCCAAGGGAGAGGGGGCCGCGCGAGCCCCAAATTTTAGTGATATAATCATCGGTCGTGTAAAagaaga > 2:2573804/1‑150 (MQ=18) gttggttTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGCACCCTCACCCGAACCCACCCCCTCAAGGGAGAGGGGACCGATCGCGCCCAAAGTTTGTGAGATATCTTCTTCTGTCTTGTGACagaaga > 1:8167551/1‑150 (MQ=37) ggttTACGCCCTCCCCGGGTGGGTGCGGGCCGGGGTGCGGCCCACAGCGCGCACGGTCACCCTCCCCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAACTTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACa < 1:9463696/150‑1 (MQ=255) ttCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACACCCAAAACCACTACCGCAACGGGGAGGGGCCCCAACGAGCCCAAAATTTGTGAGATATATTATTATGTGTTGTAAAAGAAGAACAGaaa > 2:6396835/1‑150 (MQ=21) ctccctctccctGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACACCCGAACCCACACCCGCAAGGGGGAGGGGCCCCCTAGCGCACAAATTTTGGGAGATATAATATTCAGTCTTGGTACAGAAGAACAGtaaaa > 2:4560660/1‑149 (MQ=19) ctcgccgtggGGGAGTGGGGGGGGGTGCGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCggg > 1:4144460‑M1/11‑150 (MQ=255) tgtgGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGGGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTgc > 2:7051134/1‑150 (MQ=255) ggggtgtgggCGGGGGTGCGGCCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTgcgc < 1:10086408/143‑1 (MQ=255) gGGGAGTGGGCGGGGGTGAGGCCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTgcgc > 2:2304225‑M1/2‑150 (MQ=255) gtcgtGGGCGGGGGGGCGGCCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCt > 1:10563457‑M1/6‑150 (MQ=255) gagaGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACAACCAAAACCACACCCACAACGGGGAGGGGGCCGCAAGAGCACAAAATTTGAGAGATTTATTAGTATGTCTTGTAACAAAAGAACACAAAAAAGGGCTTTTTCGccag > 2:7087920/1‑148 (MQ=255) GAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCGCACCCCAACCCACTCCCACAAGGGGGAGGGGACCCATCGAGCACAAAATTTGAGTGATAAATTATTATGTCTTGTAACAGAAGAACAGAAAATAGGGCTTTTGCGCCGGaa < 2:8203458‑M1/150‑1 (MQ=255) gCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCGCACCCAAACCCACACCCACCACGGGGAGGGGACCCAAACGGCACAAAATTTGGGTTGTATAATATTAAGTCGTGTAAAAGAAGCAAAGAAAAAACTGCGTTTGCGCCCGAAAAtt > 2:9812629/1‑150 (MQ=255) cGGGGTGCGGGCATCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGc < 2:5182419/150‑1 (MQ=255) ggggTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 2:3382118/150‑1 (MQ=255) ggggTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 1:486328/150‑1 (MQ=255) ggggTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATACCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 1:1308967/150‑1 (MQ=255) ggggTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 2:3534802/150‑1 (MQ=255) gggTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCgg < 1:10426756/150‑1 (MQ=255) ggTGAGGCCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGga < 1:355232/150‑1 (MQ=255) ggcgggCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCGGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGgaga < 2:6543634/147‑1 (MQ=255) ggCCTCAGCGCGCACGTTCACCCTCACCCGACCCCTCTCCCTCAAGGGAGAGGGGACCGAGCGAGCACAAATTTTGAGAGATATCTTCTTCGGTCGTGTAACCGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGaaaaa < 2:10539784/150‑1 (MQ=255) ggCATCAGCGCGCACGTTCACTCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGATATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGaaaaa < 1:515053/150‑1 (MQ=255) cATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGc < 2:5600345/150‑1 (MQ=255) | CCGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGC > NC_000913/164432‑164729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |