mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 47 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4583124 | 561 (0.880) | 21 (0.030) | 11/260 | NT | 3.6% | intergenic (‑76/+125) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme |
| ? | NC_000913 | = 4583237 | 582 (0.970) | intergenic (‑189/+12) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | = 4522467 | 622 (0.980) | 5 (0.010) | 3/254 | NT | 0.84% | coding (1628/1968 nt) | yjhG | putative dehydratase |
| ? | NC_000913 | = 4522490 | 601 (1.020) | coding (1605/1968 nt) | yjhG | putative dehydratase | |||||
| * | ? | NC_000913 | 4467063 = | 619 (0.980) | 13 (0.020) | 9/266 | NT | 2.1% | coding (184/948 nt) | treR | trehalose 6‑phosphate‑inducible trehalose regulon transcriptional repressor |
| ? | NC_000913 | 4467094 = | 632 (1.030) | coding (153/948 nt) | treR | trehalose 6‑phosphate‑inducible trehalose regulon transcriptional repressor | |||||
| * | ? | NC_000913 | 4346951 = | 730 (1.150) | 6 (0.010) | 3/260 | NT | 0.84% | coding (376/1647 nt) | fumB | anaerobic class I fumarate hydratase (fumarase B) |
| ? | NC_000913 | 4347040 = | 718 (1.190) | coding (287/1647 nt) | fumB | anaerobic class I fumarate hydratase (fumarase B) | |||||
| * | ? | NC_000913 | = 4283312 | 666 (1.050) | 6 (0.010) | 5/260 | NT | 0.90% | coding (1591/1650 nt) | actP | acetate transporter |
| ? | NC_000913 | = 4283328 | 688 (1.140) | coding (1575/1650 nt) | actP | acetate transporter | |||||
| * | ? | NC_000913 | = 4190599 | 586 (0.920) | 8 (0.010) | 6/254 | NT | 1.4% | intergenic (‑112/+136) | sroH/thiH | novel sRNA, function unknown/tyrosine lyase, involved in thiamine‑thiazole moiety synthesis |
| ? | NC_000913 | = 4190612 | 569 (0.970) | intergenic (‑125/+123) | sroH/thiH | novel sRNA, function unknown/tyrosine lyase, involved in thiamine‑thiazole moiety synthesis | |||||
| * | ? | NC_000913 | 4168332 = | 407 (0.640) | 8 (0.010) | 6/270 | NT | 2.0% | intergenic (+132/‑40) | rrsB/gltT | 16S ribosomal RNA of rrnB operon/tRNA‑Glu |
| ? | NC_000913 | 4209776 = | NA (NA) | noncoding (3/76 nt) | gltV | tRNA‑Glu | |||||
| * | ? | NC_000913 | 4157939 = | 658 (1.040) | 3 (0.000) | 3/262 | NT | 0.47% | coding (1090/1374 nt) | argH | argininosuccinate lyase |
| ? | NC_000913 | 4157987 = | 636 (1.050) | coding (1138/1374 nt) | argH | argininosuccinate lyase | |||||
| * | ? | NC_000913 | 4012917 = | 595 (0.940) | 3 (0.000) | 3/266 | NT | 0.55% | intergenic (‑101/‑136) | metR/metE | methionine biosynthesis regulon transcriptional regulator/5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase |
| ? | NC_000913 | 4013018 = | 501 (0.810) | intergenic (‑202/‑35) | metR/metE | methionine biosynthesis regulon transcriptional regulator/5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase | |||||
| * | ? | NC_000913 | 4011766 = | 744 (1.170) | 9 (0.020) | 7/256 | NT | 1.3% | coding (691/900 nt) | yigM | putative inner membrane EamA‑like transporter |
| ? | NC_000913 | 4011807 = | 669 (1.130) | coding (732/900 nt) | yigM | putative inner membrane EamA‑like transporter | |||||