| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 770669 = | NA (NA) | 8 (0.030) | 5/270 | NT | NA | intergenic (+58/‑789) | mngB/cydA | alpha‑mannosidase/cytochrome d terminal oxidase, subunit I |
| ? | NC_000913 | = 832368 | NA (NA) | noncoding (80/98 nt) | RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
GGCTTGAGAGTGAAGATAAACGCAAAATTACCTGATGCGCTACGCTTGCCAGTGTCTACATCATCTCTGCAATATATTGAATTTGCCTGCTTTTGTAGACCGAATAAAGCGTTCATGCCGTATCCGGCATGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/770802‑770669‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacGCCTTATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCAGAGTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTTCATCAGCCTGATGCCGGGCATAGCCCGGCATAAAAGATTACTGCGCAGCGGCAG < NC_000913/832368‑832220 GGCTTGAGAGTGAAGATAAACGCAAACTGACCTGATGCGCTACGCGGGCCAGTGTCTACATCATCTCTGCAATATATTGAATTTGCCTGCTTTTGTAGACCGAATACAGCGTTCATGCCGGATACGGCATGAACGCTTTATTCGGTCTAC < 2:3462485/150‑1GGCTTGAGAGTGAAGATAAACGCAAAATTACCTGATGCGCTACGCTTGCCAGTGTCTACATCATCTCTGCAATATATTGAATTTGCCTGCTTTTGTAGACCGAATAAAGCGTTCATGCCGGATACGGCATGAACGCTTTATTCGGTCTAC < 2:898157/150‑1 TGAAGATAAACGCAAAATTACCTGATGCGCTACGCTTGCCAGTGTCTACATCATCTCTGCAATATATTGAATTTGCCTGCTTTTGTAGACCGAATAAAGCGTTCATGCCGGATACGGCATGAACGCTTTATTCGGTCTACAAAAGCAGGC < 2:1377327/150‑1 AAGATAAACGCAAAATTACCTGATGCGCTACGCTTGCCAGTGTCTACATCATCTCTGCAATATATTGAATTTGCCTGCTTTTGTAGACCGAATAAAGCGTTCATGCCGGATACGGCATGAACGCTTTATTCGGTCTACAAAAGCAGGCAA < 2:4111264/150‑1 GATGCGCTACGCTTGCCAGTGTCTACATCATCTCTGCAATATATTGAATTTGCCTGCTTTTGTAGACCGAATAAAGCGTTCATGCCGGATACGGCATGAACGCTTTATTCGG > 1:3459648/1‑112 GATGCGCTACGCTTGCCAGTGTCTACATCATCTCTGCAATATATTGAATTTGCCTGCTTTTGTAGACCGAATAAAGCGTTCATGCCGGATACGGCATGAACGCTTTATTCGG > 1:3459669/1‑112 GATGCGCTACGCTTGCCAGTGTCTACATCATCTCTGCAATATATTGAATTTGCCTGCTTTTGTAGACCGAATAAAGCGTTCATGCCGGATACGGCATGAACGCTTTATTCGG < 2:3459648/112‑1 GATGCGCTACGCTTGCCAGTGTCTACATCATCTCTGCAATATATTGAATTTGCCTGCTTTTGTAGACCGAATAAAGCGTTCATGCCGGATACGGCATGAACGCTTTATTCGG < 2:3459669/112‑1 AACGCCTTATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCAGAGTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTTCATCAGCCTGATGCCGGGCATAGCCCGGCATAAAAGATTACTGCGCAGCGGC < 1:2892710/150‑1 AACGCCTTATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCAGAGTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTTCATCAGCCTGATGCCGGGCATAGCCCGGCATAAAAGATTACTGCGCAGCGGC < 1:2893577/150‑1 AACGCCTTATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCAGAGTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTTCATCAGCCTGATGCCGGGCATAGCCCGGCATAAAAGATTACTGCGCAGCGGC < 1:65781/150‑1 AACGCCTTATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCAGAGTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTTCATCAGCCTGATGCCGGGCATAGCCCGGCATAAAAGATTACTGCGCAGCGGC < 2:2478520/150‑1 AACGCCTGATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCAGAGTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTTCATCAGCCTGATGCCGGGCATAGCCCGGCATAAAAGATTACTGCGCAGCGGC < 1:187465/150‑1 CGCCTTATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCAGAGTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTTCATCAGCCTGATGCCGGGCATAGCCCGGCATAAAAGATTACTGCGCAGCGGCAG > 2:1251142/1‑150 CGCCTTATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCAGAGTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTTCATCAGCCTGATGCCGGGCATAGCCCGGCATAAAAGATTACTGCGCAGCGGCAG > 2:3553302/1‑150 CGCCTTATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCAGAGTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTTCATCAGCCTGATGCCGGGCATAGCCCGGCATAAAAGATTACTGCGCAGCGGCAG > 2:3557994/1‑150 GGCTTGAGAGTGAAGATAAACGCAAAATTACCTGATGCGCTACGCTTGCCAGTGTCTACATCATCTCTGCAATATATTGAATTTGCCTGCTTTTGTAGACCGAATAAAGCGTTCATGCCGTATCCGGCATGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/770802‑770669‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacGCCTTATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCAGAGTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGTTCATCAGCCTGATGCCGGGCATAGCCCGGCATAAAAGATTACTGCGCAGCGGCAG < NC_000913/832368‑832220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |