| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4615036 | 309 (1.270) | 7 (0.030) | 3/264 | NT | 2.4% | coding (508/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme |
| ? | NC_000913 | = 4615110 | 274 (1.180) | coding (434/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4614882‑4615036‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgccATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGCTCGATCTCAAAGCGTGGGGGAGCGAATGTCATCAACAACTCACCGGACGCGATAATCAGCAGAT < NC_000913/4615110‑4614963 TAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATT < 2:3577312/150‑1TAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATT < 1:3732252/150‑1 AATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTG < 2:895319/150‑1 AATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTG < 2:360217/150‑1 AATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTG > 1:2996238/1‑150 ATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGC < 2:4005852/150‑1 ATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGC < 2:3862467/150‑1 ATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGC < 1:2582423/150‑1 CCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGCGC < 1:2509302/150‑1 CCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGCGC < 1:494485/150‑1 CACCTGGCCAGGGATCACCAGCAACCGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGCGCC < 2:135826/150‑1 CACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGCGCC < 1:4117544/150‑1 CACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGCGCC > 2:2242478/1‑150 GCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGCGCCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCA < 2:2394503/150‑1 ATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGTTCGAGCATTGCGCCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAATCCGGCTGGGAAAAATTGCTCCCTGTGTGCGACGGCGCAATGC < 1:3418225/150‑1 ATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGCGCCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGC < 1:3418221/150‑1 ATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGCGCCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGC < 1:3418206/150‑1 ATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGCGCCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGC < 1:2133709/150‑1 TCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGCGCCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCTAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGCTCGA < 1:1186490/150‑1 TCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGCGCCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGCTCGA < 1:1186506/150‑1 TGCGCCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGCTCGATCTCAAAGCGTGGGGGAGCGAATGTCATCAACAACTCACCGGACGCGATAATCAGC > 2:2816759/1‑150 TGCGCCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGCTCGATCTCAAAGCGTGGGGGAGCGAATGTCATCAACAACTCACCGGACGCGATAATCAGC > 1:2776245/1‑150 TGCGCCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGCTCGAGCTCAAAGCGTGGGGGAGCGAATGTCATCAACAACTCACCGGACGCGATAATCAGC > 2:3111744/1‑150 GCCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGCTCGATCTCAAAGCGTGGGGGAGCGAATGTCATCAACAACTCACCGGACGCGATAATCAGCAGA > 1:2033593/1‑150 CCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGCTCGATCTCAAAGCGTGGGGGAGCGAATGTCATCAACAACTCACCGGACGCGATAATCAGCAGAT > 1:3630914/1‑150 CCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGCTCGATCTCAAAGCGTGGGGGAGCGAATGTCATCAACAACTCACCGGACGCGATAATCAGCAGAT > 1:538585/1‑150 CCATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGCTCGATCTCAAAGCGTGGGGGAGCGAATGTCATCAACAACTCACCGGACGCGATAATCAGCAGAT > 1:864252/1‑150 TAATCCACCTGGCCAGGGATCACCAGCAAACGCAGTTCCGCCAGCTTGCCGCGCTCTGCCAGCAAATAGATGCTGCGCTTAATCTGCTGATTATCGCGTCCGGTGAGTTGTTGATGACATTCGCTCCCCCACGCTTTGAGATCGAGCATTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4614882‑4615036‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgccATCTCACCTGTCTGGTGGACAGTAACGGCATGTTGAGCGAAACCGGCTGGGAAAAATTGCTCCCGGTGTGCGACGGCGCAATGCTCGATCTCAAAGCGTGGGGGAGCGAATGTCATCAACAACTCACCGGACGCGATAATCAGCAGAT < NC_000913/4615110‑4614963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |