| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 258469 = | NA (NA) | 4 (0.060) | 3/260 | NT | 8.5% | noncoding (207/768 nt) | IS1 | repeat region |
| ? | NC_000913 | = 1049890 | 46 (0.600) | noncoding (113/768 nt) | IS1 | repeat region | |||||
GCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGtacgcacca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/258617‑258469‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTATTGTCCATGCGATGAATAAAGGAAAAGTTATGAAAC < NC_000913/1049890‑1049738 GCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGT < 1:743802/150‑1GCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGT > 2:570600/1‑150 CTTCTGTTTCTATCATCTGTACCTCCTGTTCAGCTACTGAAGTGGGTGG‑GCTGAACGGCAAAACCACCGCCGGACATCATCGCTATATCTGCTCTCACTTCCCTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTA < 2:898366/150‑1 CTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTA < 1:439141/150‑1 TTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTAC < 1:761975/150‑1 TCTGTTGCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCTGTACG < 2:464003/150‑1 TGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GTGTGGTGCGTAACTGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGTTACGCA < 2:806388/150‑1 TGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGTTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCA < 2:522845/150‑1 GTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCTGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCcc > 2:1103039/1‑148 GTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCAC > 1:22775/1‑150 GTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCAC > 2:883663/1‑150 GTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCAC < 2:871066/150‑1 GTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCAC > 2:678588/1‑150 GTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCAC > 2:148695/1‑150 GTTTCTATCAGCTGTCCCTCCTGTTAAGATACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCAC > 2:735979/1‑150 TTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGGGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACC < 1:819555/150‑1 TTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCA < 2:1265057/150‑1 TTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCA > 1:914344/1‑150 TTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCA > 1:775989/1‑150 GGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAc > 2:763091/1‑149 TGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACCCCGCTTCTCAACCCGGTACGCACCCCCCCGTCAGTTGCTGAACAGGAGGGACAGCTGAGAGAA > 2:268025/1‑150 TCTCAACCCGGTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTATTGTCCATGCGATGAATAAAGG < 2:338293/150‑1 TCTCAACCCGGTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTATTGTCCATGCGATGAATAAAGG < 2:416086/150‑1 CGCACCCCCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCCTATTGTCCATGCGATGAATAAAGGAAAAGTTATGAAA > 1:812808/1‑150 CGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAACAACACCATCATACACTAAATCAGTATGTTGGCAGCATCACCCGTATTGTCCATGCGATGAATAAAGGAAAAGTTATGAAA > 1:791405/1‑150 GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATACAAACAGAAGCCACTGGAGAACCTCAAAAACACCCTCATACACTAAATAAGTAAGTTGGCAGCATCACCCGTATTGTACATGCGATGAATAAAGGCAAAGTTATCAAAC > 2:659054/1‑150 GCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACG‑GGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGtacgcacca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/258617‑258469‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGAACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCGTATTGTCCATGCGATGAATAAAGGAAAAGTTATGAAAC < NC_000913/1049890‑1049738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |