New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	847349 =	60 (0.790)	3 (0.040)	3/266	NT	5.2%	coding (656/747 nt)	glnH	glutamine transporter subunit
	?	NC_000913	847395 =	51 (0.700)					coding (610/747 nt)	glnH	glutamine transporter subunit

GAAGCGCAGCAATACGGTATTGCGTTCCCGAAAGGTAGCGACGAGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/847398‑847349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcgCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTTGATGAAGTACAGAATGTTTGGCGTATCGTGCAGAACGGCGTCTGCGCGGTTGGTGCCCAGTTCCATATAGGCGTTATCGATGTTCGGGAACTGACGCA  >  NC_000913/847395‑847541                                                                                                                                                                                                       GAAGCGCAGCAATACGGTAATGCGTTCCCGAAAGGTAGCGACGAGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTTGATGAAGTACAGAATGTTTGGCGTATCGTGCAGAACGGCGTCTGCGCGGTT                                                 >  2:339137/1‑150  AAGCGCAGCAATACGGTATTGCGTTCCCGAAAGGTAGCGACGAGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGTGGTTTTGATGAAGTACAGAATGTTTGGCGTATCGTGCAGAACGGCG                                                            <  1:873003/138‑1  AAGCGCAGCAATACGGTATTGCGTTCCCGAAAGGTAGCGACGAGCTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGAGGTTTTGATGAAGTACAGAATGTTTGGCGTATCGTGCAGAACGGCG                                                            >  2:873003/1‑138                                              CTGCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTTGATGAAGTACAGAATGTTTGGCGTATCGTGCAGAACGGCGTCTGCGCGGTTGGTGCCCAGTTCCATATAGGCGTTATCGATGTTCGGGAACTGACG    <  2:289730/150‑1                                                GCGCTTCCAGAGAGTCACCTACCGCTTTGAACTGACAGTTACCGGCGGTTTTGATGATGTACAGAATGTTTGGCGTATCGTGCAGAACGGCGTCTGCGCGGTTGGTGCCCAGTTGCATATTGGCGTTATCGATGTTCGGGAACggccaca  >  1:543954/1‑143                                                                                                                                                                                                       GAAGCGCAGCAATACGGTATTGCGTTCCCGAAAGGTAGCGACGAGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/847398‑847349 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcgCTTCCAGAGAGTCACCTACCGCTTTGAACTGACCGTTACCGGCGGTTTTGATGAAGTACAGAATGTTTGGCGTATCGTGCAGAACGGCGTCTGCGCGGTTGGTGCCCAGTTCCATATAGGCGTTATCGATGTTCGGGAACTGACGCA  >  NC_000913/847395‑847541

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.