New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4104841 =74 (0.970)4 (0.060) 3/260 NT 5.3% coding (135/1374 nt) cpxA sensory histidine kinase in two‑component regulatory system with CpxR
?NC_000913 4104934 = 74 (1.040)coding (42/1374 nt) cpxA sensory histidine kinase in two‑component regulatory system with CpxR

TCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTGGAAATGTGCATATCA  >  NC_000913/4104785‑4105080
                                                                                                                                                     |                                                                                                                                                  
ctggtttctgcatcaagatagtcagctaaaccgcgcgcatcttcgccatcttctggCTGACGCTGTTCGCTATCCAGAAGCGCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGc                                                                                                                                                    >  2:787620‑M1/57‑150 (MQ=255)
atggtttctgcttcatgataggcagcttaaccgcgcgcatcttcgccatcttctggCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGc                                                                                                                                                    >  1:806137‑M1/57‑150 (MQ=255)
  ggtttctgcttcatgataggcagcttaaccgcgcgcatcttcgccatcttctggCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCa                                                                                                                                                  >  1:979711‑M1/55‑150 (MQ=255)
         ggATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCACCACCAGCGCCAGAGTCAGCCAGAAGATg                                                                                                                                           >  1:645283/1‑150 (MQ=255)
          gATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATgg                                                                                                                                          <  2:1086611/150‑1 (MQ=255)
            tCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCg                                                                                                                                        <  2:906975/150‑1 (MQ=255)
             cGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGa                                                                                                                                       <  1:383144/150‑1 (MQ=255)
              gTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGaa                                                                                                                                      <  1:704354/150‑1 (MQ=255)
                 cGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTACCATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGAGAAGAt                                                                                                                                   >  2:679232/1‑150 (MQ=255)
                 cGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGAt                                                                                                                                   >  1:47821/1‑150 (MQ=255)
                  gCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACCTCAAAACCAACATCAACCCCAGCGCCAGAGTCCGCCAGAAGATGGCGAAGATg                                                                                                                                  >  1:1089186/1‑150 (MQ=255)
                      gCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCCTCAGCCAGAAGATGGCGAAGATgcgcg                                                                                                                              >  1:522826/1‑150 (MQ=255)
                          cGCTTCGACATGCTTCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGAGAAACCAGCATGGGTAACATCAAAACCAACAACAACACCAGCCACAGCCACAGCCAGAACATGGCCAACATGCCCGCGGt                                                                                                                          >  1:234387/1‑150 (MQ=255)
                           gCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCCTCTGGCGTGAATCGAGCTTGGGTATCATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGCAGATGGCGAAGCTGCGCGCCGtt                                                                                                                         >  1:858085/1‑150 (MQ=255)
                              tCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCCGCGTCAGCCAGAAGATGGCGAAGATGCCCGCGGTTAAg                                                                                                                      >  1:784942/1‑150 (MQ=255)
                               cGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCTACACCAGCGCCAGCGTCAGCCAGAAGAGGGCGAAGATGCGCGCGGTTAAGc                                                                                                                     <  1:550697/150‑1 (MQ=255)
                               cGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGc                                                                                                                     <  2:1193496/150‑1 (MQ=255)
                                gACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCAGCTGGCGTGAATCGAGCTTGCGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCt                                                                                                                    >  1:665773/1‑150 (MQ=255)
                                  cATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGc                                                                                                                  <  1:1190406/150‑1 (MQ=255)
                                   aTGCTGCTCAATCATCAGCCCCTGCCGCTGTTCGCTATCCAGAAGCTCGGGCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGcc                                                                                                                 <  2:1268055/150‑1 (MQ=255)
                                    tgctgcTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCt                                                                                                                >  1:998405/1‑150 (MQ=255)
                                     gctgctCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTa                                                                                                               >  1:1061263/1‑150 (MQ=255)
                                        gctCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGGCATCTGGCGGGAATCGAGCGTGGGGAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATCGCGAAGATGCGCGCGGTTAAGCTGCCTATCa                                                                                                            <  2:68800/150‑1 (MQ=255)
                                           cAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCATCACAAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGa                                                                                                         <  1:200655/150‑1 (MQ=255)
                                            aaTCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACCCCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGaa                                                                                                        >  2:1189982/1‑150 (MQ=255)
                                              tcatcaGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGCCATCTGGCGTGAAGCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTTAGCTGCCGAGCATGATGc                                                                                                      >  1:836528/1‑150 (MQ=255)
                                                  caGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGaa                                                                                                  >  2:696606/1‑150 (MQ=255)
                                                    gCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAAc                                                                                                >  1:1303066/1‑150 (MQ=255)
                                                     tggctgacgctggcgctggtgttgatgttggttttgatgttacccaagctcgattcacgccagatgaccgagcttctggatagcgaacagcgtcagCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAAcc                                                                                               >  1:979711‑M2/97‑150 (MQ=255)
                                                       gctgacgctggcgctggtgttgatgttggttttgatgttacccaagctcgattcacgccagatgaccgcgcttctggatagcgaacagcgtcagCCAGAAGATGGCGAAGATGCGCGCGGTTTAGCTGACTATCTTGATGCAGAAACcag                                                                                             >  2:787620‑M2/95‑149 (MQ=255)
                                                       gctgacgctggcgctggtgttgatgttggttttgatgttacccaagctcgattcacgccagatgaccgagcttctggatagcgaacagcgtcagCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCAt                                                                                             >  1:806137‑M2/95‑150 (MQ=255)
                                                       ccTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCAt                                                                                             >  1:714722/1‑150 (MQ=255)
                                                            CGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGAt                                                                                        <  1:615192‑M1/150‑1 (MQ=255)
                                                             GCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTGAAGCTGCCTATCATGACGCAGAAgccatctggta                                                                                       <  2:75407‑M1/150‑6 (MQ=255)
                                                              CTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCATCCAGAATATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAg                                                                                      >  2:1185528‑M1/1‑150 (MQ=255)
                                                                  tCGCTATCCAGAAGCTCGGTCATATGGCTTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACAAGCGCCAGCGTCAGCCAGAAGAATGTGAAGCTGCGCGCGGTTAAGCTGCCTATCATTAAGCAGAAACCCTCAGATAGCcgc                                                                                  >  2:1218370/1‑150 (MQ=255)
                                                                   cGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGAGCGCGGTTAAGCTGCCTATCATGAAGCATCTACCATCAGATAGCcgcg                                                                                 >  1:795621/1‑150 (MQ=255)
                                                                      tATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGCTGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGAcc                                                                              >  1:686130/1‑150 (MQ=255)
                                                                          cAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGCCCACGc                                                                          >  2:759635/1‑150 (MQ=255)
                                                                           aGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCa                                                                         >  2:1130527/1‑150 (MQ=255)
                                                                            gAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCaa                                                                        <  1:544366/150‑1 (MQ=255)
                                                                             aaGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAg                                                                       >  2:299245/1‑150 (MQ=255)
                                                                              tgttggttttgatgttacccaagctcgattcacgccagatgaccgagcttctggatagcgaacagcgtcagCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAgg                                                                      >  1:181528‑M2/72‑150 (MQ=255)
                                                                              aGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAgg                                                                      <  2:1295148/150‑1 (MQ=255)
                                                                                 tCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCGATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGttt                                                                   >  1:143278/1‑150 (MQ=255)
                                                                                  cGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGCCCACGCAAGGtttt                                                                  >  1:501110/1‑150 (MQ=255)
                                                                                    gTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGCCCACGCAAGGTTTTaa                                                                >  1:608386/1‑150 (MQ=255)
                                                                                    gTCATCTGGCGGGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTaa                                                                <  2:120494/150‑1 (MQ=255)
                                                                                       aTCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAAcc                                                             <  2:947115/150‑1 (MQ=255)
                                                                                          tGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATc                                                                                            <  2:178983/116‑1 (MQ=255)
                                                                                          tGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATc                                                                                            >  1:178983/1‑116 (MQ=255)
                                                                                            gCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACggg                                                        <  2:1285395/150‑1 (MQ=255)
                                                                                               tGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGCCCACGCAAGGTTTTAAACCACGGGTgc                                                     >  1:844025/1‑149 (MQ=255)
                                                                                               tGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAAc                                                              >  2:802505/1‑141 (MQ=255)
                                                                                               tGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAAc                                                              <  1:802505/141‑1 (MQ=255)
                                                                                                gAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGATTTAAACCACGGGTGAc                                                    >  2:558611/1‑150 (MQ=255)
                                                                                                       gCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGAAGCGCGCGGTTAAGATGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGCCCACGCAACGTTTTAAACCACGGGTTACCATCttt                                             >  1:448177/1‑150 (MQ=255)
                                                                                                        cTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTa                                            <  1:116454/150‑1 (MQ=255)
                                                                                                         ttGGGTAACATCAAAACCAGCATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATTAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTAc                                           <  2:830863/150‑1 (MQ=255)
                                                                                                          tGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACg                                          <  2:239416/150‑1 (MQ=255)
                                                                                                            ggTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTTCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGAt                                        >  2:458908/1‑150 (MQ=255)
                                                                                                            ggTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCCCGCAAGGTTTTAAACCACGGGTGACCATCTTTACGAt                                        >  2:440685/1‑150 (MQ=255)
                                                                                                             gTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATc                                       >  2:1234111/1‑150 (MQ=255)
                                                                                                             gTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATc                                       >  1:1089183/1‑150 (MQ=255)
                                                                                                              tAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAACCCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATcc                                      >  2:1103550/1‑150 (MQ=255)
                                                                                                              tAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATcc                                      <  1:729478/150‑1 (MQ=255)
                                                                                                                aCATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGAAGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCCTCTTAAAGATCCgg                                    >  1:820216/1‑150 (MQ=255)
                                                                                                                 cATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGc                                   >  2:1208816/1‑150 (MQ=255)
                                                                                                                 cATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGc                                   <  1:141235/150‑1 (MQ=255)
                                                                                                                  aTCAAAACCAACATCAACACCAGCGCCATCTTCAGCCAGAATATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCa                                  <  2:645283/150‑1 (MQ=255)
                                                                                                                  aTCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATAAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCa                                  >  2:518247/1‑150 (MQ=255)
                                                                                                                   tCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAg                                 <  2:473309/150‑1 (MQ=255)
                                                                                                                   tCAAAACCAACATCAACACCAGCGCCAGCGTAAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATAAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAg                                 <  2:665773/150‑1 (MQ=255)
                                                                                                                      aaaCCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGttt                              >  1:645546/1‑150 (MQ=255)
                                                                                                                         ccAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTacg                           >  2:602004/1‑150 (MQ=255)
                                                                                                                         ccAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATATTTACGATCCGGCAGTTTacg                           >  2:84062/1‑150 (MQ=255)
                                                                                                                             cATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGCTGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCCCGGGTGACCATCTTTACGATCCGGCAGTTTACGACGc                       >  1:1001778/1‑150 (MQ=255)
                                                                                                                                  acacCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGtt                  <  2:1183377/150‑1 (MQ=255)
                                                                                                                                   cacCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGCCCATCTTTACGATCCGGCAGTTTACGACGCAGGTTg                 >  1:556423/1‑150 (MQ=255)
                                                                                                                                   cacCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTg                 <  2:733392/150‑1 (MQ=255)
                                                                                                                                    acCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTgg                <  2:345532/150‑1 (MQ=255)
                                                                                                                                    acCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTgg                >  1:756820/1‑150 (MQ=255)
                                                                                                                                    acCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTgg                <  1:1189982/150‑1 (MQ=255)
                                                                                                                                      cagcgccagcgTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTGGaa              <  1:880202/150‑1 (MQ=255)
                                                                                                                                         cgccagcgTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTGGAAAtg           <  2:91399/150‑1 (MQ=255)
                                                                                                                                          gccagcgTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTGGAAAtgt          >  1:12821/1‑150 (MQ=255)
                                                                                                                                           ccagcgTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGGAGTTTACGACGCAGGTTGGAAAtgtg         <  1:1020928/150‑1 (MQ=255)
                                                                                                                                           ccagcgTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTGGAAAtgtg         >  1:1069925/1‑150 (MQ=255)
                                                                                                                                            cagcgtcagCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGATGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTGGAAATGTGc        <  2:234387‑M2/141‑1 (MQ=255)
                                                                                                                                             agcgtcagCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTGGAAATGTGCa       <  2:836528‑M2/142‑1 (MQ=255)
                                                                                                                                               cgtcagCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGCTCCGGCAGTTTACGACGCAGGTTGGAAATGTGCata     >  1:1191708‑M2/7‑150 (MQ=255)
                                                                                                                                                gtcagCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTGGAAATGTGCatat    >  2:239822‑M2/6‑150 (MQ=255)
                                                                                                                                                gtcagCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCTGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTGGAAATGTGCATATc   <  1:1284405‑M2/145‑1 (MQ=255)
                                                                                                                                                  cagCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAACCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTGGAAATGTGCATATCa  <  2:218675‑M2/147‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                  
TCGTTGGGCGGATCGTTCGCCAGCTCCGCTTCGACATGCTGCTCAATCATCAGCCCCTGACGCTGTTCGCTATCCAGAAGCTCGGTCATCTGGCGTGAATCGAGCTTGGGTAACATCAAAACCAACATCAACACCAGCGCCAGCGTCAGCCAGAAGATGGCGAAGATGCGCGCGGTTAAGCTGCCTATCATGAAGCAGAAACCATCAGATAGCCGCGACCACGCAAGGTTTTAAACCACGGGTGACCATCTTTACGATCCGGCAGTTTACGACGCAGGTTGGAAATGTGCATATCA  >  NC_000913/4104785‑4105080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.