| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,074,691 | C→G | 8.2% | intergenic (+33/‑88) | flu → / → yeeR | CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter/CP4‑44 prophage; putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,074,691 | 0 | C | G | 8.2% | 173.7 / 6.5 | 70 | intergenic (+33/‑88) | flu/yeeR | CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter/CP4‑44 prophage; putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (31/32); new base G (2/4); total (34/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
GCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCATTCTTCGCCTT > NC_000913/2074545‑2074838 | gCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGAGGTCCCGGTCATCATg > 2:296811/1‑150 (MQ=255) cccGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGa > 2:579056/1‑150 (MQ=255) cGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGCACCATCGCCTCTCTGTGGTCCCCGTCATCATGccc > 1:784110/1‑150 (MQ=255) gtCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATGATGACC‑ggg < 1:1041831/150‑1 (MQ=255) gtCCGGGAAAATATCACCCTGGGCGGTCAGGCCGGTTATGCCCAGTGCGTCAGCGGCTGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCTTCGCCTCTCTGTGGTCCCGGTCATGATGACC‑ggg < 2:600848/150‑1 (MQ=255) tCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑gggc > 2:431323/1‑149 (MQ=255) cGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATGATGACC‑GGGAcc < 1:122985/150‑1 (MQ=255) cGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATGATGACC‑GGGAcc < 1:123612/150‑1 (MQ=255) aaaaTATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCGCGGTCATCATGACC‑GGGACCCGGa < 2:106524/150‑1 (MQ=255) atatCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTGATCATGACC‑GGGACCCGGACCg > 1:1309698/1‑150 (MQ=255) tCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGgcg < 1:739159/150‑1 (MQ=255) cACCCTGGGCGTGCAGGCCGGTTATGCCCACAGCGGCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGgcgc < 1:62265/150‑1 (MQ=255) cccTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGAGAGATCCATCGCCTCTCTGTGGTCCCGGTCTTCATTACC‑GGGACCCGGACCGGCGCaa > 1:1134861/1‑150 (MQ=255) ccTGGGCGATCAGGCCGGTTATGCCCACAGCTTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCCGTCATAAAGACCAGGGCCCCGGAAC‑GCGCaaa > 2:1194043/1‑149 (MQ=255) cTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACCGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACg < 1:161423/150‑1 (MQ=255) gggCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGa < 2:747512/150‑1 (MQ=255) gCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGCCCGGCGCAACGGATc > 1:582765/1‑150 (MQ=255) gCGGTCAGGCCGGTTATGCCCTCAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCAGACTGAATGTGTCGTTCTGACAGCACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCTGCGCAACGGATc < 1:37772/150‑1 (MQ=255) ggCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCCACGGATCTTCAAcc > 2:1108720/1‑149 (MQ=255) ggCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACATTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGCGTCTTCAACg > 2:218726/1‑150 (MQ=255) ccGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGGCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGcc < 2:179414/150‑1 (MQ=255) cGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGACCCATCGCCTCTCTGTGGTCCCGGGCGTGATGCCC‑GGGCCCCGGCCCGGGGCCACGGATCTTCAACGccc > 1:314866/1‑149 (MQ=255) ggTTAGGCCCACTGCGGCAGCGGCAGCAGCGCTTATGGTTTAATCTGTCAGGCCACACTTAATGTGACCTTCTCCCCGAACCATCGCCTCTCTGTGGCCCCGGTCACCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCcac < 2:531465/150‑1 (MQ=255) gTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCCGGCGTGAAGTAC‑GGGCCCCGGCCCGGCGCCGCGGGGCTTCAACGccccc > 1:1079108/1‑147 (MQ=255) tATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGGCAGGCCACACTGAAGGTGACCTTCTGACACAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACAtt < 1:366175/150‑1 (MQ=255) tGCCCACAGCGTCAGCGGCAGCAGCGTTTATGTGTATAACGTTCTGGCCACAATTAATGTGACATTCTGACAGACCCATCGCCTCTCTGTGGTCCCGGTCATCATGACG‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCg < 2:1189780/150‑1 (MQ=255) tGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGGCATCATGACC‑GGGGCCCGGGCCGGGGCAACGGCTCGTCCACGcccccttgg > 1:971146/1‑143 (MQ=255) cccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGGCCCGGCCCGGCGCCACGGTTCTTCAACGCCCCATTCggg > 1:441406/1‑148 (MQ=255) cccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCt > 2:1560/1‑150 (MQ=255) ccACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGCACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGCCCCGGACCGGCGCCACGGATCTTCAACGCCACCTTCGCTg > 2:290730/1‑150 (MQ=255) cacaGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTgg > 2:89830/1‑150 (MQ=255) cacaGCGACAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTTACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTgg < 2:1285151/150‑1 (MQ=255) gCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCAtt > 2:563477/1‑150 (MQ=255) cGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCCACGCCACCTTCGCTGGCATTa > 2:637068/1‑150 (MQ=255) ggtagcagcGCTGAAGGGTATAACGGTCAGGCCCCACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGCCCCGGCCCGGCGCAACGGAGCTTCAACGCCACAGTCGCGGGCAGTACCAAGaa > 2:165334/4‑150 (MQ=255) cagcGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGCCC‑GGGACCCGGACCGGCGCCACGGCTCTTCACCGCCACCTTCGGTGGCCTTAACAATacactga > 1:444271/1‑144 (MQ=255) ggcttatgggAATAAGGGGCAGCCCACACTCAAGGTTCCCTCCTCCCCGACCCAACGCCTCTCTGTGGCCCCGGTCAACATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGatat < 1:1312607/143‑1 (MQ=255) gAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCTGCGCAACGGATCTTAAGCGCCACAGTCGCTGGGATTAACAAAAACATGATATtaat > 2:196086/1‑150 (MQ=255) aaGGGTATACCGGTCAGGCCACACTGAATGGGACCTTCTGACAGAACCATCGCCGCTCTGTGGTCCCGGGCATCATGACC‑GGGACCCGGAACGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATtcatc < 2:85316/150‑1 (MQ=255) ataAGGGTCAGGCCACACTGAATGTGACGTTCTCACACAACCAGCGCCTCTCTGTGGCCCCGGCCATCATGACC‑GGTACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAg < 1:427632/150‑1 (MQ=255) cGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGGCCCGGACCGGCGCAACGGATCTTCAACGCCACCTTGGCTGGCATTAACAATAACATGATATTCATCACGGAGTGAc > 1:391943/1‑150 (MQ=255) ggTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACt < 1:537264/150‑1 (MQ=255) ccACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTAc < 1:322170/150‑1 (MQ=255) acacTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAg < 1:561669/150‑1 (MQ=255) acacTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGCACCGGCGCAACGGAACTTCAACCCCACAATCGCTGTCATTAACAATAACATGAAATTCATCACGGAGTGACTAAGTTACac > 2:53059/1‑149 (MQ=255) tGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGGCCCGGTCATCTTGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAg < 2:306598/150‑1 (MQ=255) aTGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCg < 1:1280317/150‑1 (MQ=255) aTGTCACCTTCTCACACAACCATCGCCTCTCTGTGGACCCGGTCATCAGGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCg < 1:605254/150‑1 (MQ=255) ggtcaCCTTCTGACCCACCCATCGCCCCTCTGGGGCCCCGGCCTACATGCCC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCgg < 1:1259951/146‑1 (MQ=255) caaCCATCGCGGCTCTGGGGTCCGGGTATACATGCCC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCctgct < 2:1188030/149‑1 (MQ=255) cATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATATTCAACGCCACATTAGCTGGCATTAACAATAACATGATATTCATAACGGAGTGACTATGTTTCAGATAGTCTGCGCGCAGATACAGCTGATc > 2:1216885/1‑150 (MQ=255) tCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑Gc < 2:368577/150‑1 (MQ=255) ccgcgctGTGGCCCCGGGCATCATGACC‑GGTACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAgg < 1:431323/145‑1 (MQ=255) ccTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAgg < 1:214919/150‑1 (MQ=255) ccTCTCTGTGGTCCCGGGCATCTTGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCTCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAgg < 2:33883/150‑1 (MQ=255) ttctGTGGTCCCGTTCATCATGCCC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGAtt < 2:1140633/149‑1 (MQ=255) tctGTGGCCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGC‑GATCAGCAGGAtca < 1:579056/150‑3 (MQ=255) tgtgGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGc < 2:22956/150‑1 (MQ=255) tgtgGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGc < 1:738514/150‑1 (MQ=255) tgtgGTCCCCGTGATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTAAACGCCACATTCGCTGGCATTAAAAATAAAATGATATTAAAAACCGAGTGACTATTTTACACATAGTACGCGCGCTGATCCAGCTTATC‑GCAGGATTTGc > 2:954575/1‑150 (MQ=255) ggggggcccGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGc < 1:340266/144‑1 (MQ=255) gtgGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGAGTTGcc > 1:873414/1‑150 (MQ=255) tgGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCa > 2:940483/1‑150 (MQ=255) ggTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATCATATTCATCAAGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCAt > 2:726586/1‑150 (MQ=255) gTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGATGATC‑GCAGGATTTGCCAtt > 1:521659/1‑150 (MQ=255) tCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCTACGGATCTTCAACGCCACAGTCGCTGGCATTCACATTAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GGAGGATTTGCCCttc > 2:390452/1‑150 (MQ=255) ccGGTCATCATGACC‑GGGACCCGGACCGGTGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCAttctt > 2:924249/1‑150 (MQ=255) cGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCAttcttc > 1:20067/1‑150 (MQ=255) cGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCAttcttc < 2:675797/150‑1 (MQ=255) cGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCAgtcttc > 2:870453/1‑150 (MQ=255) tcatcaTGACG‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATAAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCATTCTTCGcc < 2:486275/150‑1 (MQ=255) acatcatGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCATTCTTCGcc < 1:1289161/149‑1 (MQ=255) atcatGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCATTCTACGCCtt > 2:38802/1‑150 (MQ=255) | GCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGACAGAACCATCGCCTCTCTGTGGTCCCGGTCATCATGACC‑GGGACCCGGACCGGCGCAACGGATCTTCAACGCCACATTCGCTGGCATTAACAATAACATGATATTCATCACGGAGTGACTATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATC‑GCAGGATTTGCCATTCTTCGCCTT > NC_000913/2074545‑2074838 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |