| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,474,878 | T→C | 5.2% | intergenic (+22/‑106) | yfdQ → / → yfdR | CPS‑53 (KpLE1) prophage; uncharacterized protein/CPS‑53 (KpLE1) prophage; conserved protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,474,878 | 0 | T | C | 5.2% | 295.2 / 5.3 | 97 | intergenic (+22/‑106) | yfdQ/yfdR | CPS‑53 (KpLE1) prophage; uncharacterized protein/CPS‑53 (KpLE1) prophage; conserved protein |
| Reads supporting (aligned to +/- strand): ref base T (37/54); new base C (2/3); total (40/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.75e-01 | |||||||||||
TACTGGTTCTGCGCATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATG > NC_000913/2474729‑2475026 | tACTGGTTCTGCGCATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCt < 2:1041257/150‑1 (MQ=255) aCTGGTTCTGCGCATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTg < 2:496788/150‑1 (MQ=255) aCTGGTTCTGCGCATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAAAGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTg < 1:663356/150‑1 (MQ=255) ggTTCTGCGCATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑gg > 2:349934/1‑150 (MQ=255) tCTGCGCATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑ggggg < 1:753546/150‑1 (MQ=255) gcgcATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCACCTGC‑‑GGGGGCAt > 2:1282461/1‑150 (MQ=255) cgcATTATTCAGCTGGAAGCGGTGCAGGAAGCTATGGCTAACGAATTTCGTGATCTGCTTGTTGCGAAATTCAAAGACAGCAAAGTAGCAACCTGTATTGGTAGTTTAACCTCCTGATTTCCTTACTGCAAATGCCCCTTC‑‑GGGGGCAtt > 1:794796/1‑150 (MQ=255) cgcATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCAtt < 2:722041/150‑1 (MQ=255) gcATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCCGC‑‑AGGGGCAttt < 1:1070864/150‑1 (MQ=255) gcATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCCGC‑‑AGGGGCAttt < 1:215681/150‑1 (MQ=255) cATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTa > 2:175293/1‑150 (MQ=255) attattCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTAt < 1:496773/150‑1 (MQ=255) attaatCCGCTGGCAGCGGTGCAGGAAGATAAGGCTAACGAATTTCCTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAAAGCCCCTGC‑‑GGGGGCATTTAt < 1:621296/150‑1 (MQ=255) ttattCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCAGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATg < 1:385915/150‑1 (MQ=255) ttaatCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAAATTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTCGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATg < 1:835502/150‑1 (MQ=255) attCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGACTTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGa < 1:333954/150‑1 (MQ=255) ttCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCCGC‑‑AGGGGCAtttgcagta < 1:1265925/150‑7 (MQ=255) aGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACg < 2:1179375/150‑1 (MQ=255) aGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACg < 1:1139580/150‑1 (MQ=255) gCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGt > 1:77157/1‑150 (MQ=255) gCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGAAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGt > 2:438096/1‑150 (MQ=255) cTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTTAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGTCATTTATGGAAACGTa < 1:832200/150‑1 (MQ=255) cTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAACGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTa > 1:806682/1‑150 (MQ=255) cTGGAAGCGGTGCAGGAAGATATGGCTAACGAATATCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTa < 1:1170458/150‑1 (MQ=255) gAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAAtt < 1:478809/150‑1 (MQ=255) gCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAAc < 1:748313/150‑1 (MQ=255) cgctGCAGGAAGATATGGATAACGATTTTCGTTCTCTGGTTTTTGAGATATTCAAAGACAGCAAAGAAGAAACCTTTCTTGGTACTTTCTCCGCCTGATTTCATTACTTCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACt < 1:209448/147‑1 (MQ=255) gTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCa > 1:83557/1‑150 (MQ=255) gCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGATACCTTTTTTGGTACTTTCTCCGCCTGATTTCATTACTGCAAATCCCCCTGC‑‑GGGGGCATTTATGGAAACGGAATTAACTCaat > 1:246761/1‑150 (MQ=255) cAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCaata < 1:38516/150‑1 (MQ=255) aGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCAc < 1:964453/150‑1 (MQ=255) tatatGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCAcc < 2:1240847/149‑1 (MQ=255) aatGGCTAACTAATTTAGTTATCTTCTTGTTGAGAAATTCAAAGACATCAAAGTATAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCACCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCgg < 2:209152/149‑1 (MQ=255) ggCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATg > 1:768531/1‑150 (MQ=255) gCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATgg < 2:360973/150‑1 (MQ=255) tAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTg > 1:1095535/1‑150 (MQ=255) cGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAgg < 2:9176/150‑1 (MQ=255) cGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAgg < 1:1066172/150‑1 (MQ=255) gAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGCGGGGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATTGTGAg < 2:307489/150‑1 (MQ=255) tttCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTAACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCtt > 1:51027/1‑150 (MQ=255) tCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTcc > 1:697750/1‑150 (MQ=255) cGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCt < 2:1058936/150‑1 (MQ=255) tGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCAACGGATGGTGAGGGCTTCCttt > 2:152086/1‑150 (MQ=255) gATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCtttt > 2:1216717/1‑150 (MQ=255) cTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTAcc < 2:1198676/150‑1 (MQ=255) tgttgAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATAAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAAc < 1:245844/150‑1 (MQ=255) gttgAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACt > 1:1094484/1‑150 (MQ=255) ttgAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTc > 1:1259010/1‑150 (MQ=255) tgAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCa > 1:316933/1‑150 (MQ=255) agaAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAgc < 1:771219/150‑1 (MQ=255) gaAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAgcg < 1:39933/150‑1 (MQ=255) aTTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCTAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCgg < 1:727857/150‑1 (MQ=255) ttCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATGTATGGAAACGTAATTACCTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGt > 1:968046/1‑150 (MQ=255) cAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGc < 1:313408/150‑1 (MQ=255) aaGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAg > 2:112427/1‑150 (MQ=255) gCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATTATCACCGGATGGTGAGGGCTTCCTTTTACCAAAACTCAGCGCGGTGCAGCGCata > 1:859302/1‑150 (MQ=255) gCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCata > 1:747831/1‑150 (MQ=255) aGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACg < 2:354001/150‑1 (MQ=255) tAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTg < 2:77157/150‑1 (MQ=255) gAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGga > 2:989702/1‑150 (MQ=255) aaaCCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGgag < 2:768531/150‑1 (MQ=255) aaaCCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGgag < 2:707376/150‑1 (MQ=255) aaaCCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCAAAACTCAGCGCGGTGCAGCGCATATACGTGgag > 2:275134/1‑150 (MQ=255) ccTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGTAGCGCATATACGTGGAGAAc > 2:696074/1‑150 (MQ=255) acTTTATTGGTCCATACACCGCCTGAGTTCATTACTGCAACTGCCCCTGC‑‑GGGGGCATTTATGGAAACGTTATTAACTCAATAATCACCGGTTGGTGAGGGCATCCTTTTACCCAAACTCAGCGCGGTGCAGAGCATATACGTGGAGAAc < 2:499853/149‑1 (MQ=255) tttATTGGTACTATCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACaa > 1:1057747/1‑150 (MQ=255) ataggTACTTTCACCGCCTGAATTCAATACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGATGGCTTCCTTTTACCCAAACTCAGCGCGCTGCAGCGCATATACGTGGATAACAAAAt < 1:503263/147‑1 (MQ=255) ttGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATg < 1:1273796/150‑1 (MQ=255) ggTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTc > 2:452411/1‑150 (MQ=255) cTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCAttt > 1:316704/1‑150 (MQ=255) ttCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATttat < 2:1317947/150‑1 (MQ=255) cACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATttatta > 2:1221052/1‑150 (MQ=255) cGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTaaaa > 2:669313/1‑150 (MQ=255) cGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTaaaa < 2:303140/150‑1 (MQ=255) gCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAAc < 1:1083618/150‑1 (MQ=255) aTTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACttttt < 1:1257186/150‑1 (MQ=255) aTTTCATTACTGCAAATCCCCCGGC‑‑GGGGGCATTTATGGAAACGTAAATAACTCAAATATCACCGGATGGTGAGGGGGTCATTTTACACAAACTCAGCGCGGTGCAGCGAATATTCGTGGAGAACAAAATCTCTGTTATTTACACtattt > 2:140781/1‑150 (MQ=255) tttCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTc < 2:83557/150‑1 (MQ=255) ttCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTcc < 2:1094484/150‑1 (MQ=255) ttCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTcc < 1:346080/150‑1 (MQ=255) tCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCg < 1:382598/150‑1 (MQ=255) cATAACTCCAAATCCCCCTGC‑‑GGGGGCATTTATGGAAACGTACAAAACTCAATAATCACCGGACGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCgg < 1:1294355/150‑1 (MQ=255) aTTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCggg > 2:67907/1‑150 (MQ=255) ttACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGa < 1:586550/150‑1 (MQ=255) aCTGCAAATGCCCCTGC‑‑TTGTGCATTTATGGAAACGTAATTTACTCAATAATCACCGTATGGTGATGGCTTCCTTTTACCCAAACTCAGCGCGGTGCTGCGCATATACGTGGAGATCAAAATGTCATTTATTAAAACTTTTTCCGGGAAg < 1:438096/150‑1 (MQ=255) ccataaaTGACCCCGC‑‑AGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGc > 2:745914/5‑150 (MQ=255) tGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCa > 1:1074518/1‑150 (MQ=255) cataaaTGCCCCCGC‑‑AGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCa > 2:1057895/4‑150 (MQ=255) gCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCAt > 2:368345/1‑150 (MQ=255) gCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAAGAATCACCGGATGGTGAGGGCGTCCTTTTCCCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCAGTTATTAAAACTTTTTCCGGGAAGCAt > 1:320007/1‑150 (MQ=255) cAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGGTGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCAtt > 2:691311/1‑150 (MQ=255) aTGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCAttttt < 1:452411/150‑1 (MQ=255) ccccTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACGAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTttatt > 2:485207/1‑150 (MQ=255) ccccTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTttatt > 2:1063587/1‑150 (MQ=255) cccTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTttatta < 2:316933/150‑1 (MQ=255) ccTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTtattat < 1:446417/150‑1 (MQ=255) cTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATg < 2:1259010/150‑1 (MQ=255) cTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGGCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATg < 2:1156735/150‑1 (MQ=255) | TACTGGTTCTGCGCATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGATTTCATTACTGCAAATGCCCCTGC‑‑GGGGGCATTTATGGAAACGTAATTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATG > NC_000913/2474729‑2475026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |