Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,046,784 A→T 6.2% intergenic (‑182/‑182) yihG ← / → polA inner membrane protein, inner membrane acyltransferase/5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,046,7840AT 6.2% 298.8 / 8.2 113intergenic (‑182/‑182)yihG/polAinner membrane protein, inner membrane acyltransferase/5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease
Reads supporting (aligned to +/- strand):  ref base A (54/52);  new base T (2/5);  total (56/57)
Fisher's exact test for biased strand distribution p-value = 4.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.00e-01

Only 100 of 115 total aligned reads displayed.

TTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCCTGTCTGTGGCATCC  >  NC_000913/4046635‑4046931
                                                                                                                                                      |                                                                                                                                                    
ttttAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTa                                                                                                                                                      <  2:295794/150‑1 (MQ=255)
   tAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATTAAAAACAAAGACAAACA‑TCATGCTGTaaaa                                                                                                                                                   <  2:192631/150‑1 (MQ=255)
     tcAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAg                                                                                                                                                 <  1:886344/149‑1 (MQ=255)
     gCAGAAAACGACCCAAATAACGGATGATCCTTAAGGTGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAATAACAAAGACAAACA‑TCATGCTGTATAAAg                                                                                                                                                 <  2:1090537/150‑1 (MQ=255)
       aGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCa                                                                                                                                               >  2:334645/1‑150 (MQ=255)
        taaaaCGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCAt                                                                                                                                              <  1:744643/149‑1 (MQ=255)
         aaaaCGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTAAATTATTAGGTATGGATTTATTTTTAACTGCATGAAAAAAAAAGAAAAACA‑TCATGCTGTAAAAAGAATg                                                                                                                                             >  2:1176113/1‑150 (MQ=255)
           aaCGACCCAAATAACGTATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTTTTTACAGCATGat                                                                                                                                           <  1:907765/150‑1 (MQ=255)
           aaCGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGat                                                                                                                                           <  2:721123/150‑1 (MQ=255)
            aCGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTTTTTACAGCATGatg                                                                                                                                          <  2:1004979/150‑2 (MQ=255)
              gACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGataat                                                                                                                                        >  1:195555/1‑150 (MQ=255)
              caCCCAAATAACGTATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCCTTATCTCAATTAAAAGGGATGGATTTATTTTTAACTGCATGAAAAACACAGACAAACA‑TCATGCTTTTTACAGCATGatgtt                                                                                                                                        <  1:185947/149‑4 (MQ=255)
                cccAAATAACTGATTATCCTTAATGAGAAAAATAATTCATATCTATACACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTTTTTACAGCATGatgtttg                                                                                                                                      <  2:622664/150‑6 (MQ=255)
                cccAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTTTTTACAGCATGatgtttg                                                                                                                                      <  2:1314939/150‑6 (MQ=255)
                cccAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGAtaat‑aa                                                                                                                                     >  1:371842/1‑150 (MQ=255)
                 ccAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTATAAAAAATCGCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑aaa                                                                                                                                    <  2:826168/150‑1 (MQ=255)
                   aaaTAACTGATGATCCTTAATGAGAATAATAATTCATCTATAACCACATTAGAAAAAATCACATTATCTCAATTATTAGGGATGGATTTATTTATAACTGCAGGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAAtt                                                                                                                                  <  1:201097/150‑1 (MQ=255)
                   aaaTAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAAtt                                                                                                                                  >  2:1042058/1‑150 (MQ=255)
                    aaTAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTa                                                                                                                                 <  2:113725/150‑1 (MQ=255)
                       aaCGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTaaaa                                                                                                                              >  2:744475/1‑150 (MQ=255)
                       aaCGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTA‑TTTTAAAAGGAAGTAAAACAAATGCAAACATTAATGC‑GTAAAAAGGATGATAATAAAATTaaaa                                                                                                                              >  1:467796/1‑150 (MQ=255)
                         cGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGc                                                                                                                            <  2:265747/150‑1 (MQ=255)
                          ggATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCg                                                                                                                           >  1:1042339/1‑150 (MQ=255)
                          ggATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCg                                                                                                                           >  2:649791/1‑150 (MQ=255)
                              gatCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGt                                                                                                                       >  2:882500/1‑150 (MQ=255)
                               atCCTTAAGGAGTAAAATAATTCATATCTATCCAAATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACATACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTa                                                                                                                      <  1:827348/150‑1 (MQ=255)
                               atCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAATAGCATGATAAT‑AAATTAAAAGCGATGTa                                                                                                                      >  1:54432/1‑150 (MQ=255)
                                tCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTaa                                                                                                                     >  2:44841/1‑150 (MQ=255)
                                 ccTTAAGTATAAAAATAATTATTATCTATCAACATTAGAAAAAATACCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTaaa                                                                                                                    <  1:828053/150‑1 (MQ=255)
                                  cTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAATAAGCATGATAAT‑AAATTAAAAGCGATGTAaat                                                                                                                   >  2:122343/1‑150 (MQ=255)
                                  cTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAaat                                                                                                                   <  1:451651/150‑1 (MQ=255)
                                    tAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATAATTAGGGATTGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCTTGCTGTAAAAAGCATGATTAT‑AAATTAAAAGCGATGTAaataa                                                                                                                 >  2:1075356/1‑150 (MQ=255)
                                         agaAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTAt                                                                                                            <  2:961013/150‑1 (MQ=255)
                                          gaAAAATAATTCATATCTATCCACATTAGAAAAAATCCCTATATCTCAATTATTATGTATGGATTTATTTTTAATTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATg                                                                                                           <  1:668748/150‑1 (MQ=255)
                                          gaAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATg                                                                                                           >  2:479157/1‑150 (MQ=255)
                                          gaAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATg                                                                                                           >  1:273702/1‑150 (MQ=255)
                                              aataatTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGcaca                                                                                                       >  1:567716/1‑150 (MQ=255)
                                               ataatTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGCAAATAATTTATGCACaa                                                                                                      <  2:715633/150‑1 (MQ=255)
                                                 aatTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACaaat                                                                                                    >  1:43523/1‑149 (MQ=255)
                                                       tatctatcCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATcc                                                                                              <  1:406116/150‑1 (MQ=255)
                                                       tatctatcAACATTAGAAAAAATCACATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATTCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATcc                                                                                              <  2:1121614/150‑1 (MQ=255)
                                                        atctatcCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCca                                                                                             >  1:205218/1‑150 (MQ=255)
                                                         tctatcCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCcac                                                                                            <  2:195555/150‑1 (MQ=255)
                                                           tatcCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCcacaa                                                                                          >  2:294037/1‑149 (MQ=255)
                                                           tatcCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACAt                                                                                          >  2:963078/1‑150 (MQ=255)
                                                               cacaTTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACg                                                                                      >  2:702801/1‑150 (MQ=255)
                                                               cacaTTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACg                                                                                      >  2:1186572/1‑150 (MQ=255)
                                                               cacaTTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACg                                                                                      >  2:1251905/1‑150 (MQ=255)
                                                                 caTTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGAt                                                                                    >  2:591846/1‑150 (MQ=255)
                                                                    tAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTa                                                                                                 <  1:340391/134‑1 (MQ=255)
                                                                    tAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTa                                                                                                 >  2:340391/1‑134 (MQ=255)
                                                                        aaaaaTCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTgcgag                                                                             <  1:633831/150‑1 (MQ=255)
                                                                        aaaaaTCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTgcgag                                                                             <  2:520173/150‑1 (MQ=255)
                                                                         aaaaTCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTgcgagc                                                                            <  1:1084007/150‑1 (MQ=255)
                                                                          aaaTCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTgcgagcg                                                                           >  2:151430/1‑150 (MQ=255)
                                                                            aTCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TAATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCCCATGACGATTTGAGAGCGAt                                                                         >  2:352796/1‑150 (MQ=255)
                                                                              cccATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATcc                                                                       >  1:751640/1‑150 (MQ=255)
                                                                                    aTCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCagaaga                                                                 >  2:280379/1‑150 (MQ=255)
                                                                                      ctcAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATc                                                               >  2:887747/1‑150 (MQ=255)
                                                                                      ctcAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATGTGCGAGCGATCCAGAAGAta                                                               >  2:57595/1‑149 (MQ=255)
                                                                                       tcAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCt                                                              <  1:629518/150‑1 (MQ=255)
                                                                                       tcAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGAGAGCGATCCAGAAGATCt                                                              >  1:349195/1‑150 (MQ=255)
                                                                                        cAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTa                                                             >  2:1221055/1‑150 (MQ=255)
                                                                                         aaTTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTAc                                                            <  1:284761/150‑1 (MQ=255)
                                                                                          attattAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACa                                                           <  1:891160/150‑1 (MQ=255)
                                                                                                      tgatTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCAc                                               <  1:649791/149‑1 (MQ=255)
                                                                                                      ggatTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCAc                                               >  1:345200/1‑150 (MQ=255)
                                                                                                           tatttTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGaaaa                                          >  1:397748/1‑150 (MQ=255)
                                                                                                             tttttAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGc                                        <  2:482937/150‑1 (MQ=255)
                                                                                                             tttttAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGc                                        <  1:711944/150‑1 (MQ=255)
                                                                                                             tttttAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGc                                        <  2:751640/150‑1 (MQ=255)
                                                                                                                    cTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGAGATGTAAATAATTTATGCACAAAGTTATCAACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGaaa                                 >  1:571038/1‑150 (MQ=255)
                                                                                                                     tGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCGAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGaaaa                                >  2:858572/1‑150 (MQ=255)
                                                                                                                     tGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGaaaa                                >  2:1133248/1‑150 (MQ=255)
                                                                                                                      gCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACTTGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGaaaaa                               >  2:410906/1‑150 (MQ=255)
                                                                                                                      gCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGaaaaa                               <  1:271873/150‑1 (MQ=255)
                                                                                                                          taaaaaCAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCa                           <  1:629425/149‑1 (MQ=255)
                                                                                                                          gAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCa                           >  1:1096525/1‑150 (MQ=255)
                                                                                                                          gAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCAACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAAATCa                           >  2:37810/1‑150 (MQ=255)
                                                                                                                           aaaaaCAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCAt                          >  2:789806/1‑150 (MQ=255)
                                                                                                                              aaCAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGtt                       >  2:1135976/1‑150 (MQ=255)
                                                                                                                                   aGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCAt                  <  2:108152/150‑1 (MQ=255)
                                                                                                                                   aGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGAAGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCAt                  <  2:104368/150‑1 (MQ=255)
                                                                                                                                     aCAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAATATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATcc                <  2:225613/150‑1 (MQ=255)
                                                                                                                                     aCAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATcc                <  1:455483/150‑1 (MQ=255)
                                                                                                                                     aCAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATcc                <  2:105839/150‑1 (MQ=255)
                                                                                                                                     aCAAACA‑TCAAGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATATATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGACGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATcc                <  2:951587/150‑1 (MQ=255)
                                                                                                                                      cAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCct               >  1:10911/1‑150 (MQ=255)
                                                                                                                                        atta‑tcatGCTTTTTACAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCctgt             >  1:422096/4‑150 (MQ=255)
                                                                                                                                         aCA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCctgtc            <  1:871624/150‑1 (MQ=255)
                                                                                                                                          ca‑tcatGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCctgtct           <  1:924280/150‑1 (MQ=255)
                                                                                                                                          ca‑tcatGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCctgtct           <  1:397515/150‑1 (MQ=255)
                                                                                                                                           a‑tcatGCTTTTTACAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCctgtctg          >  1:401606/1‑150 (MQ=255)
                                                                                                                                               atGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATTACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCCTGTCTGTgg       <  2:354595/150‑1 (MQ=255)
                                                                                                                                               atGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCCTGTCTGTgg       <  1:1113772/150‑1 (MQ=255)
                                                                                                                                                tGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCCTGTCTGTGGc      <  1:1186572/150‑1 (MQ=255)
                                                                                                                                                tGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCCTGTCTGTGGc      <  1:702801/150‑1 (MQ=255)
                                                                                                                                                  cTGTAAAAAGTATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAATTTATCCAGTTGACTATTTGCTAGCGATCCAGAATATCTACTAAATATTTTCACTAAAAGCGGGGTAAAACTCATGTTTTCATCCTGTCTGTGTCAt    <  1:704635/150‑1 (MQ=255)
                                                                                                                                                    gTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCCTGTCTGTGGCATcc  <  2:516413/150‑1 (MQ=255)
                                                                                                                                                    gTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGAACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCCTGTCTGTGGCATcc  >  1:1182500/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
TTTTAGCAGAAAACGACCCAAATAACGGATGATCCTTAAGGAGAAAAATAATTCATATCTATCCACATTAGAAAAAATCCCATTATCTCAATTATTAGGGATGGATTTATTTTTAACTGCATGAAAAACAAAGACAAACA‑TCATGCTGTAAAAAGCATGATAAT‑AAATTAAAAGCGATGTAAATAATTTATGCACAAAGTTATCCACATGACGATTTGCGAGCGATCCAGAAGATCTACAAAAGATTTTCACGAAAAGCGGTGAAAAACTCATGTTTTCATCCTGTCTGTGGCATCC  >  NC_000913/4046635‑4046931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑