| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,142,433 | A→C | 5.3% | intergenic (‑212/‑97) | frwA ← / → frwC | putative PTS enzyme: Hpr, enzyme I and II components/putative enzyme IIC component of PTS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,142,433 | 0 | A | C | 5.3% | 285.4 / 3.1 | 96 | intergenic (‑212/‑97) | frwA/frwC | putative PTS enzyme: Hpr, enzyme I and II components/putative enzyme IIC component of PTS |
| Reads supporting (aligned to +/- strand): ref base A (37/53); new base C (4/2); total (41/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACAAATCTGCCAAAAGCTGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGG > NC_000913/4142287‑4142581 | accaagcTGCCAACAGCTGGACAAATGAAATGTAACCGTCAATGTGAGACGCGGCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATgg < 2:787246/144‑1 (MQ=255)aCAAATCTGCCAAAAGCTGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATgg < 2:740007/150‑1 (MQ=255)aCAAATCTGCCAAAAGCTGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATgg < 2:740012/150‑1 (MQ=255)aCAAATCTGCCAAAAGCTGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTACGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATgg > 1:1061963/1‑150 (MQ=255) aTCTGCCAAAAGCTGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCtt < 2:963329/150‑1 (MQ=255) cTGCCAAAAGCTGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCtttt < 1:1309493/150‑1 (MQ=255) tcccAAAAGCTGGCCACATGTAATCTAACCGGCAATTAGCGACGCGTCTCACAAGACGCTGGTTTGCGGCAAGCTGCCGGTTTATCGCAAGTTATGAGGCGGACCGCACTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCttttt < 2:45680/148‑1 (MQ=255) tGCCAAAAGCTGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCttttt < 1:390621/150‑1 (MQ=255) ccAAAAGCTGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCATGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGGCCATTTACTGGACttttgta < 2:60714/150‑4 (MQ=255) ccAAAAGCTGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTAt > 2:99635/1‑150 (MQ=255) ccAAAAGCTGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTAt > 1:939967/1‑150 (MQ=255) aaaaGCTGGACAAATGTAATGTAACCGTCAATTTGCGACTCGTCTCACAAGACGCTGGTTTGCGGCATGCTTCCGGTTTATCTCAAGTTATGAGGCTGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATcc < 1:1182707/150‑1 (MQ=255) aaaaGCTGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATcc > 2:650314/1‑150 (MQ=255) aaaaGCTGGACAAATGTAATGTAACAGTCAATTTGCGACGCGTCACACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATAATACAAAAGTCCAGTAAATGGCCTTTTTATcc < 1:622430/150‑1 (MQ=255) aaaGCTGGACAAAAGTAATGTAACCGTCAATATGCGACCCGTCTCACAAGACGCGGTCTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCTCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCa < 2:59453/150‑1 (MQ=255) tGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGtt < 2:593600/150‑1 (MQ=255) tGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGtt > 1:1155707/1‑150 (MQ=255) tgACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGttt < 1:743338/149‑1 (MQ=255) ggACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGttt > 1:290309/1‑150 (MQ=255) cAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCt > 1:378494/1‑150 (MQ=255) acagTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGTCATGCTTCCGGTATATCGCAATTTATGAGGCTGATCGCAGTTTTGTACTGAGATTACAAACGTCCAGTAAATGGCCTGTTTATCCACTGTTTGCTCCGCCGGCGCTTg > 2:212538/4‑150 (MQ=255) aCCGTCAAGTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTACGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCATATTATCCACTGTTTGCTCCGCCTGCGATTg < 1:806978/150‑1 (MQ=255) ccGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGc < 2:534928/150‑1 (MQ=255) ccGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGc > 1:857980/1‑150 (MQ=255) cGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGcc < 2:122923/150‑1 (MQ=255) cGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGACTTTTTATCAACTGTTTTCTCCGCCTGCGATTTcc > 2:330159/1‑150 (MQ=255) cGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGGTTCTCGCAAGTGATGAGGCGGCTCGCATTTTTGTCCTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGcc < 1:629538/150‑1 (MQ=255) cGTCAATTTGCGACGCGTCTCACAAGACGCTGGTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGcc < 1:572680/150‑1 (MQ=255) cGTCAATTTGCGACGCGTCTCACAAGACGCTGGTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGcc < 1:648570/150‑1 (MQ=255) gTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCt > 1:1210654/1‑150 (MQ=255) tCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGCGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTAGCTCCGCCTGCGATTGCCTa < 2:671403/150‑1 (MQ=255) tGCGACGCGTCTCACAAGTCGCTGTTTTGCGGCATGCTTCCGGTTTAACGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGttt < 2:924635/150‑1 (MQ=255) cGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTtcc > 1:409962/1‑150 (MQ=255) cgcgTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTtcctcc < 2:463420/150‑1 (MQ=255) gcgTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCa > 2:638724/1‑150 (MQ=255) gTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGCGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGAAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATc > 2:1035404/1‑150 (MQ=255) gTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCTCATGCGATTGCCTATTGTTTCCTCCATc > 1:693822/1‑150 (MQ=255) tcACAAGACGCTGTTTTGCGGTATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCaaa < 1:1179769/150‑1 (MQ=255) tcACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCaaa > 2:399275/1‑150 (MQ=255) aaGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAata > 2:461157/1‑150 (MQ=255) gACGCTGTTTTGCGGCATGCTTCGGGTTTATCGCAAGTTATGAGTCGGATCGCATTTATGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATg < 2:670933/150‑1 (MQ=255) gACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATg > 1:1036720/1‑150 (MQ=255) cGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGa > 2:210266/1‑150 (MQ=255) gCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGAc > 1:904906/1‑150 (MQ=255) gTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATg > 2:600946/1‑150 (MQ=255) tttGCGGCATGCTTCCGGTTTATCTCAAGTTATGAGGCGGATCGCATTTTAGTACTGATATTACAAAAGTCCACTAAATTGCCTTTTTATCGACTGTTTGCTCCGCCTGCGATTTCCTATTGTTTCCTCCATCAAAAATATGGACATggg < 1:805960/150‑1 (MQ=255) ttGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGc < 1:499906/150‑1 (MQ=255) tGCGGCATGCTGCCGGTTTATCGCAAGTTATGAGGCGTATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCt < 1:526154/150‑1 (MQ=255) cGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTTCTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCCCTGTTTGCTCCGCCTGCGATTGACTATTGTTTCCTCCATCAAAAATATGGACATGGGCttt > 2:1039386/1‑150 (MQ=255) cGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCttt < 1:1158237/150‑1 (MQ=255) cGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCttt < 2:576322/150‑1 (MQ=255) ggCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTc > 1:557388/1‑150 (MQ=255) gcctGCTTCCGGGTACTCGCAAGTTTTGCGGCGGTCCGCATTTTGGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTAGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATTGGCTATct < 2:642172/147‑2 (MQ=255) gCATGCTTGCTGTTTATCGCAAGTTATGAGGCTGATCGCATTTTTGTACTGATTTTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTTCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCg < 2:554591/150‑1 (MQ=255) aTGCTTCCTGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCa < 2:1061963/150‑1 (MQ=255) aTGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCa < 1:546668/150‑1 (MQ=255) cTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGGCATGGGCTTTCGCAAGc > 2:1176592/1‑150 (MQ=255) ccGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCg < 2:68375/150‑1 (MQ=255) ggattATCGCAAGTATTGCGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGGCTTTTTATCCACTGTTTGCTCCTCCTGCGATTGCCTCTTGTTTCCTCCATCAAAAATATGGACATGGGCTTGCGAAAGcccatg < 2:193239/147‑4 (MQ=255) ggTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCGTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCggg < 1:901546/150‑1 (MQ=255) ttATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGagc < 1:1148391/150‑1 (MQ=255) ttATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGagc < 2:939967/150‑1 (MQ=255) aTCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGagcag > 2:275908/1‑150 (MQ=255) cGCAAGTTCTGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCt < 1:1091686/150‑1 (MQ=255) cGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCt < 1:1231538/150‑1 (MQ=255) aGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGAAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTatg < 2:1157233/150‑1 (MQ=255) ggCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGtt < 1:1103309/150‑1 (MQ=255) cGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCAATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTgg < 1:1080038/150‑1 (MQ=255) ggATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTGTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGt < 1:148988/150‑1 (MQ=255) ggATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATACACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGt < 1:1277703/150‑1 (MQ=255) ggCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAg < 1:1033651/149‑1 (MQ=255) cATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGAt > 1:374252/1‑150 (MQ=255) aTTTTTGTACTGATATTACAAAAGTCCATTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATc < 2:500108/150‑1 (MQ=255) aTTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATc < 2:298745/150‑1 (MQ=255) tttttGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGGTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTAAGAATGAGTTGGTGCAGATcc > 1:1057188/1‑150 (MQ=255) ttttGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCt < 1:602769/150‑1 (MQ=255) ttGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGa < 1:331686/150‑1 (MQ=255) tGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGaa > 2:1024953/1‑150 (MQ=255) agTACTGATATTACAAAAGAACACTAAATGGCCTTTTTATCCACTGTTTGCTCAGCCTCCGATTGCCAATTGTTTCCTCCATCAAAAATATGGACCTGGGCTTTCTCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCATATCCTGaa > 2:688125/2‑150 (MQ=255) gTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGGGCAGCTTATGAATGAGTTGGTGCAGATCCTGaaa > 2:813857/1‑150 (MQ=255) aCTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGaaaaa > 1:1091908/1‑150 (MQ=255) aCTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGaaaaa > 2:1254241/1‑150 (MQ=255) ttatTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATAcc < 1:602982/149‑1 (MQ=255) ggataaaaaGGCCATTTACTGGACTTTTTATCCACTGTTTGCTCCGCCTGAGATAGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCg > 2:711042/6‑150 (MQ=255) ataaaaaGGCCATTTACTGGACTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGATTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTc > 1:925269/4‑150 (MQ=255) cAACAGTCCACTAACTGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTAATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGGCAg < 2:496328/150‑1 (MQ=255) cAAAACTCCACTAAATGGCCATTTAATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAg < 1:815926/150‑1 (MQ=255) aaaaGGCCATTTACTGGACTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGc > 1:566951/1‑150 (MQ=255) aaaaGGCCATTTACTGGACTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATACTGAAAAATACCCGTCAGc > 1:595632/1‑150 (MQ=255) aaaGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCa < 1:1203175/150‑1 (MQ=255) gTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGTGCAGCTTATGAATGAGTTGGTGCAGCTCCTGAAAAATACCCGTCAGCAttt > 2:573525/1‑150 (MQ=255) gTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCAttt > 1:624075/1‑150 (MQ=255) tCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGACTGCGATTGCCTATTGTTTCCTACATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGAGCAGCTCCTGAAAAAAACCCGTCAGCATTTa > 2:766786/1‑150 (MQ=255) aGTAAATGGCCTTTTTATCCTCTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCATGAAAAATACCCGTCAGCATTTAATg > 2:974068/1‑150 (MQ=255) aGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCACGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCAGTCAGCATTTAATg > 1:100372/1‑150 (MQ=255) gTAAATGGCCTTTTCATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAATAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGa < 1:290/150‑1 (MQ=255) aaTGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATTGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATAACCGTCAGCATTTAATGACgg > 1:513769/1‑150 (MQ=255) aaTGGCCTTTTTATCCACTGTTTGATCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGAATTTAATGACgg > 2:739746/1‑150 (MQ=255) | ACAAATCTGCCAAAAGCTGGACAAATGTAATGTAACCGTCAATTTGCGACGCGTCTCACAAGACGCTGTTTTGCGGCATGCTTCCGGTTTATCGCAAGTTATGAGGCGGATCGCATTTTTGTACTGATATTACAAAAGTCCAGTAAATGGCCTTTTTATCCACTGTTTGCTCCGCCTGCGATTGCCTATTGTTTCCTCCATCAAAAATATGGACATGGGCTTTCGCAAGCCCGGGAGCAGCTTATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGG > NC_000913/4142287‑4142581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |