| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3462076 = | 113 (1.510) | 6 (0.080) | 6/280 | 5.3 | 5.6% | coding (103/378 nt) | gspI | general secretory pathway component, cryptic |
| ? | NC_000913 | 3462114 = | 93 (1.310) | coding (141/378 nt) | gspI | general secretory pathway component, cryptic | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTGGATATCGCTGCGCCAGTTCCACTCTTCGCCATTTATTAACTCTTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCTTGTGACTGAAGCTGGTTATCCGCTATCCACAATGCCAGCGTCTCGTTACGCATTCGCTCGATGGCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3462228‑3462076‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcattGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCGAGGAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGCGATATCCACTCAAGCAAAGACGGCACGCTTCTGGAACGCAC > NC_000913/3462114‑3462260 GTGGATATCGCTGCGCCAGTTCCACTCTTCGCCATTTATTAACTCTTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCTTGTGACTGAAGCTGGTTATCCGCTATCCACAATGCCAGCGTCTCGTTACGCATTCGCTCGATGG > 1:1110634/1‑149GTGGATATCGCTGCGCCAGTTCCACTCTTCGCCATTTATTAACTCTTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCTTGTGACTGAAGCTGGTTATCCGCTATCCACAATGCCAGCGTCTCGTTACGCATTCGCTCGATGG > 1:654723/1‑149GTGGATATCGCTGCGCCAGTTCCACTCTTCGCCATTTATTAACTCTTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCTTGTGACTGAAGCTGGTTATCCGCTATCCACAATGCCAGCGTCTCGTTACGCATTCGCTCGATGG > 1:1052196/1‑149 TGGATATCGCTGCGCCAGTTCCACTCTTCGCCATTTATTAACTCTTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCTTGTGACTGAAGCTGGTTATCCGCTATCCACAATGCCAGCGTCTCGTTACGCATTCGCTCGATGGC > 1:645254/1‑149 GATATCGCTGCGCCAGTTCCACTCTTCGCCATTTATTAACTCTTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCTTGTGACTGAAGCTGGTTATCCGCTATCCACAATGCCAGCGTCTCGTTACGCATTCGCTCGATGGCAT > 2:1188150/1‑149 ATATCGCTGCGCCAGTTCCACTCTTCGCCATTTATTAACTCTTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCTTGTGACTGAAGCTGGTTATCCGCTATCCACAATGCCAGCGTCTCGTTACGCATTCGCTCGATTGCATT > 2:215159/1‑149 ATATCGCTGCGCCAGTTCCACTCTTCGCCATTTATTAACTCTTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCTTGTGACTGAAGCTGGTTATCCGCTATCCACAATGCCAGCGTCTCGTTACGCATTCGCTCGATGGCATT > 1:122475/1‑149 CACAATGCCAGCGTCTCGTTACGCATTCGCTCGATGGCATTGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCGAGGAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGCGA > 1:397668/1‑149 CAATGCCAGCGTCTCGTTACGCATTCGCTCGATGGCATTGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCGAGGAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGCGATA > 1:625557/1‑149 ATGCCAGCGTCTCGTTACGCATTCGCTCGATGGCATTGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCGAGGAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGCGATATa > 1:675401/1‑148 TGCCAGCGTCTCGTTACGCATTCGCTCGATGGCATTGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCGAGGAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGCGATATCC > 2:447802/1‑149 AGCGTCTCGTTACGCATTCGCTCGATGGCATTGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCGAGGAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGCGATATCCACTC > 1:142098/1‑149 CGTCTCGTTACGCATTCGCTCGATGGCATTGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCGAGGAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGCGATATCCACTCAA < 2:397668/149‑1 TGGCATTGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCGAGTAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGTGATATCCAGTCAAGCAAAGACGGCACGCTTCTGGAt < 1:589256/149‑2 TGGCATTGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCGAGGAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGCGATATCCACTCAAGCAAAGACGGCACGCTTCTGGAA < 1:447802/149‑1 TGGCATTGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCGAGGAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGCGATATCCACTCAAGCAAAGACGGCACGCTTCTGGAA > 2:725353/1‑149 TTGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCCAGGAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGCGATATCCACTCAAGCAAAGACGGCACGCTTCTGGAACGCAC < 2:257509/149‑1 GTGGATATCGCTGCGCCAGTTCCACTCTTCGCCATTTATTAACTCTTTGCCAGAACTGGACGTGTTTTCCTCGCCGAATGAATCTTGTGACTGAAGCTGGTTATCCGCTATCCACAATGCCAGCGTCTCGTTACGCATTCGCTCGATGGCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3462228‑3462076‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcattGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCGAGGAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGCGATATCCACTCAAGCAAAGACGGCACGCTTCTGGAACGCAC > NC_000913/3462114‑3462260 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |