Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,375,828 IS186 (+) +4 bp coding (132‑135/963 nt) menC ← O‑succinylbenzoyl‑CoA synthase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2375828 =0 (0.000)49 (0.670) 45/286 0.6 100% coding (135/963 nt) menC O‑succinylbenzoyl‑CoA synthase
?NC_000913 = 2515617 NA (NA)noncoding (1345/1345 nt) IS186 repeat region
* ? NC_000913 = 23758310 (0.000)64 (0.880) 47/286 0.5 100% coding (132/963 nt) menC O‑succinylbenzoyl‑CoA synthase
?NC_000913 2514273 = NA (NA)noncoding (1/1345 nt) IS186 repeat region

Only 100 of 116 total aligned reads displayed.

TTCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATTCCGTTTGAA  >  NC_000913/2375684‑2375979
                                                                                                                                                   |                                                                                                                                                    
ttCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCt                                                                                                                                                     >  2:301178‑M1/1‑148 (MQ=255)
 tcagccaATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTCCCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtc                                                                                                                                                    <  2:600789‑M1/146‑3 (MQ=255)
  cTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcc                                                                                                                                                   <  2:533747‑M1/149‑4 (MQ=255)
   gagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTccc                                                                                                                                                  <  1:474118‑M1/8‑1 (MQ=255)
    agcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcttcgtcttaacgaggcaccgaggcggcgcattcttcagatggttcaacccttaagttagcgcgtatgggaGATCTcccc                                                                                                                                                 >  2:69512‑M1/141‑149 (MQ=255)
     ccAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccat                                                                                                                                                >  1:17886‑M1/1‑143 (MQ=255)
       aaTGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataa                                                                                                                                              <  1:968373‑M1/149‑9 (MQ=255)
            acaGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgct                                                                                                                                         >  2:533341‑M1/1‑136 (MQ=255)
            acaGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgct                                                                                                                                         <  2:1169880‑M1/149‑14 (MQ=255)
               ggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagcacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagattgttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTcgc                                                                                                                                      <  2:1036256‑M1/20‑1 (MQ=255)
                cTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaact                                                                                                                                     >  2:1071421‑M1/1‑132 (MQ=255)
                   aCGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaa                                                                                                                                  <  2:17886‑M1/149‑21 (MQ=255)
                       gtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCt                                                                                                                              <  2:10813‑M1/28‑1 (MQ=255)
                          ggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCa                                                                                                                           >  1:696120‑M1/119‑149 (MQ=255)
                           ggCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtg                                                                                                                          >  2:272593‑M1/1‑121 (MQ=255)
                           ggCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCacccataagcgctatcttaagggttgtg                                                                                                                          <  1:167028‑M1/149‑29 (MQ=255)
                             ccACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGATGCCCGGCAGTGGGGAGATCtcccataagcgctaacttacgggttgtggt                                                                                                                        <  2:780498‑M1/149‑31 (MQ=255)
                              cACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttctggggtgttgtc                                                                                                                       >  2:65881‑M1/1‑118 (MQ=255)
                               aCGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtat                                                                                                                      >  1:477520‑M1/1‑117 (MQ=255)
                                 ggAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtatta                                                                                                                    >  2:186850‑M1/1‑115 (MQ=255)
                                   ccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCaa                                                                                                                  <  2:1069491‑M1/40‑1 (MQ=255)
                                    cctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcggcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCaaa                                                                                                                 <  2:880238‑M1/41‑1 (MQ=255)
                                     gtgacagcctacataacgcaattgaagaacgcgaggcatcgtcttaacgacgcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAAc                                                                                                                >  2:123826‑M1/108‑149 (MQ=255)
                                     ctgacagcctacaaaacgcaattcaagaacgcgaggcaacgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCCCCCTTCGCTCTCGCCTTCACGCAGGCAAAc                                                                                                                <  2:63403‑M1/42‑1 (MQ=255)
                                      gCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcct                                                                                                               >  2:809749‑M1/1‑110 (MQ=255)
                                         tCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTCCGCCTCTTCCCACGTTTCCTGACTGAAGCCCGGCAGAGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgat                                                                                                            >  1:551574‑M1/1‑107 (MQ=255)
                                         cagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATAc                                                                                                            >  1:163169‑M1/104‑149 (MQ=255)
                                          agcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACa                                                                                                           <  2:918976‑M1/47‑1 (MQ=255)
                                           gcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAg                                                                                                          >  2:864375‑M1/102‑149 (MQ=255)
                                            cctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGc                                                                                                         >  1:1097942‑M1/101‑149 (MQ=255)
                                             ctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGcc                                                                                                        <  2:809062‑M1/50‑1 (MQ=255)
                                              tacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTAGCGCTCGCCTTCACGCAGGCAAACATACAGccc                                                                                                       <  2:1016624‑M1/51‑1 (MQ=255)
                                                tAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcc                                                                                                                <  2:839450‑M1/138‑39 (MQ=255)
                                                tAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcc                                                                                                                >  1:839450‑M1/1‑100 (MQ=255)
                                                caaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCCCCCTTCGCGCTCGCCTTCACGCAGGGAAACATAAAGCCCGt                                                                                                     <  2:147655‑M1/53‑1 (MQ=255)
                                                  gCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaa                                                                                                   <  2:866084‑M1/149‑52 (MQ=255)
                                                   cTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaac                                                                                                  <  1:724463‑M1/149‑53 (MQ=255)
                                                   cTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaac                                                                                                  <  1:186850‑M1/149‑53 (MQ=255)
                                                     cgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCgg                                                                                                >  1:10813‑M1/92‑149 (MQ=255)
                                                     cGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgt                                                                                                <  1:1071421‑M1/149‑55 (MQ=255)
                                                          tCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGCAGCCCGGCAGTGGGGAGATCtcccctaagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccga                                                                                           >  2:745698‑M1/1‑90 (MQ=255)
                                                          tCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccga                                                                                           >  2:537664‑M1/1‑90 (MQ=255)
                                                               tGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggtggtggtattacgcctgatatgatttaacgtgccgatgaat                                                                                      <  2:213425‑M1/149‑65 (MQ=255)
                                                                 ccagccagTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaatta                                                                                    <  2:691869‑M1/149‑67 (MQ=255)
                                                                   agccagTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattact                                                                                  <  1:492837‑M1/149‑69 (MQ=255)
                                                                   agccagTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattact                                                                                  <  2:1179236‑M1/149‑69 (MQ=255)
                                                                     ccagTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactct                                                                                <  1:272700‑M1/149‑71 (MQ=255)
                                                                       agTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctca                                                                              <  2:974335‑M1/149‑73 (MQ=255)
                                                                           tcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCCCCCTTCGCGCTCGCCTTCACGCCGGGCAACATACCGCCCGTCGCGGGTTTTTAACCGCCTGTcgcgcc                                                                          <  1:324476‑M1/80‑2 (MQ=255)
                                                                           tcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCa                                                                          >  1:779026‑M1/70‑149 (MQ=255)
                                                                           aTTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgacttactctcacgat                                                                          <  1:301178‑M1/149‑77 (MQ=255)
                                                                             ttACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGGTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcacataagcgctatcttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataa                                                                        <  2:944993‑M1/149‑79 (MQ=255)
                                                                               aCCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataact                                                                      >  1:461499‑M1/1‑69 (MQ=255)
                                                                                cccAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactg                                                                     >  2:353814‑M1/1‑68 (MQ=255)
                                                                                cccAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactg                                                                     >  1:466675‑M1/1‑68 (MQ=255)
                                                                                  aacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAaccac                                                                   >  1:500067‑M1/63‑149 (MQ=255)
                                                                                   aGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtc                                                                  >  2:136085‑M1/1‑65 (MQ=255)
                                                                                        gcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCcgc                                                             <  2:691010‑M1/93‑1 (MQ=255)
                                                                                          accgaggcgtcgcattcttcagatggttcaacccttaatttagcgcttatgggaGATCTGCCCCCACCATTCGAGCTCGCCTTAACGCAGGCACACATACAGCCAGTCGCGGGTTGTTAACCGCCTGTCCCGCCCACCCACccccgagt                                                           <  1:583617‑M1/95‑4 (MQ=255)
                                                                                          acccaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCATCGCGCTCGCCTTCACGCCGGCAAAGCAACAGCCCGTCGCGGCTTTTTAACCCCCGGTCGCGCAGCACCACCCccgcgg                                                           <  1:587627‑M1/95‑2 (MQ=255)
                                                                                              tggcgtcgcattgttcagatgggtcaacccttcagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGGCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCAt                                                       >  2:122199‑M1/51‑149 (MQ=255)
                                                                                              acacTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctgg                                                       <  1:272593‑M1/149‑96 (MQ=255)
                                                                                               ggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATg                                                      >  1:895786‑M1/50‑149 (MQ=255)
                                                                                               cacTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggc                                                      <  1:36692‑M1/149‑97 (MQ=255)
                                                                                                gcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATgg                                                     >  2:444025‑M1/49‑149 (MQ=255)
                                                                                                  tttGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagtaattctggccca                                                   >  1:1223942‑M1/1‑50 (MQ=255)
                                                                                                  tttGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggccca                                                   >  1:1165001‑M1/1‑50 (MQ=255)
                                                                                                     gcattcttcagatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATc                                                >  1:988400‑M1/44‑149 (MQ=255)
                                                                                                       gcCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattg                                              <  1:908497‑M1/149‑105 (MQ=255)
                                                                                                       gcCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattg                                              <  2:466675‑M1/149‑105 (MQ=255)
                                                                                                         gtcttCCCAGGTTTCCTGACTGAAGCCCGCCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggt                                            <  2:327635‑M1/148‑107 (MQ=255)
                                                                                                          cttcagatggtgccacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCa                                           >  2:215038‑M1/39‑149 (MQ=255)
                                                                                                               gatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAATCATACAGCCCGTCGCGGGTGTTTAACCGCCAGTCGCGCAGAACCACCCCCGCCTACATGGGGATCTGCCAGCGGt                                      <  1:1007642‑M1/116‑1 (MQ=255)
                                                                                                               gatggttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGGTTTTACCCGCCTGTCGCGCAGGACCCCCCCCGCGTCCATGGGGTTCTGCCAgcgct                                      <  2:983135‑M1/116‑3 (MQ=255)
                                                                                                                cAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccg                                     >  2:1103854‑M1/1‑36 (MQ=255)
                                                                                                                   gttcaacccttaagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATAc                                  >  2:272317‑M1/30‑149 (MQ=255)
                                                                                                                    tttCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaccgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaaga                                 >  1:734028‑M1/1‑32 (MQ=255)
                                                                                                                    tttCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaaga                                 >  2:660332‑M1/1‑32 (MQ=255)
                                                                                                                    tttCCTGACTGAAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaaga                                 >  1:781076‑M1/1‑32 (MQ=255)
                                                                                                                        ctgactgaAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactg                             >  2:669678‑M1/1‑28 (MQ=255)
                                                                                                                        ctgactgaAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactg                             >  1:310869‑M1/1‑28 (MQ=255)
                                                                                                                        acccttaagttagcacttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTgcg                             <  2:475080‑M1/125‑1 (MQ=255)
                                                                                                                         tgactgaAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactgg                            <  1:1166546‑M1/149‑123 (MQ=255)
                                                                                                                         tgactgaAGCCCGGCAGTGGGGAGATCtcccataagcgctaacgtaaggggtgtggtattacgcctgataggatttaacgtgccgatgaattacgctcccgataactggtcagcaattctggcccgtattggtaagcccgatgatctgg                            >  2:811192‑M1/1‑27 (MQ=255)
                                                                                                                          tactgaaGCGCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgttgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactgga                           <  2:551574‑M1/148‑124 (MQ=255)
                                                                                                                          gactgaAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactgga                           <  2:477520‑M1/149‑124 (MQ=255)
                                                                                                                          gactgaAGCCCGGCAGTGGGGAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactgga                           <  1:809749‑M1/149‑124 (MQ=255)
                                                                                                                             taagttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTa                        >  1:1069491‑M1/20‑149 (MQ=255)
                                                                                                                                gttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGc                     >  1:918976‑M1/17‑149 (MQ=255)
                                                                                                                                gttagcgcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGc                     <  2:1051326‑M1/133‑1 (MQ=255)
                                                                                                                                      gcttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACg               >  1:809062‑M1/11‑149 (MQ=255)
                                                                                                                                        ttatgggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCCCGCTACGCATTACGGa             <  2:908322‑M1/141‑1 (MQ=255)
                                                                                                                                            gggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATTcc         <  2:772216‑M1/145‑1 (MQ=255)
                                                                                                                                             ggaGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATTCCg        <  2:63074‑M1/146‑1 (MQ=255)
                                                                                                                                             ggAGATCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgcc        >  2:1206439‑M1/1‑7 (MQ=255)
                                                                                                                                               agaTCtcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccgg      >  1:752963‑M1/1‑5 (MQ=255)
                                                                                                                                               aGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATTCCGtt      >  2:324476‑M1/2‑149 (MQ=255)
                                                                                                                                                   ctcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggct  >  2:743751‑M1/1‑1 (MQ=255)
                                                                                                                                                   ctcccataagcgctaacttaagggttatggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccggggct  >  1:1184974‑M1/1‑1 (MQ=255)
                                                                                                                                                   ctcCCCCCACCCTTCGCGCTCGCCTACACGCAGGCCACAATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGGCCATGGGGATCTGCCAGCGGGAGACCAGCGCGCTACGCATTACGTATTCCGGTTGaa  >  1:763911/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TTCTGCCAATGCACAGCTTACGCCAAAGGCCACGGAAGGCATCTGCGGTAGCTCGCAATCGCCTGCCAGCCAGTTATTTACCCAGGCAAGCAGCACACTTTGCGCCTCTTCCCAGGTTTCCTGACTGAAGCCCGGCAGTGGGGAGATCTCCCCCCACCCTTCGCGCTCGCCTTCACGCAGGCAAACATACAGCCCGTCGCGGGTTTTTAACCGCCTGTCGCGCAGAACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATTCCGTTTGAA  >  NC_000913/2375684‑2375979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.