| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 915,215 | T→G | 8.6% | intergenic (‑358/+137) | ybjE ← / ← aqpZ | putative transporter/aquaporin Z |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 915,215 | 0 | T | G | 8.6% | 502.7 / 17.5 | 205 | intergenic (‑358/+137) | ybjE/aqpZ | putative transporter/aquaporin Z |
| Reads supporting (aligned to +/- strand): ref base T (138/46); new base G (2/19); total (140/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.19e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 212 total aligned reads displayed.
GGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTT > NC_000913/915066‑915364 | ggggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAtt < 1:1287226/150‑1 (MQ=32)ggggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAtt < 1:40935/150‑1 (MQ=32) ggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTgg < 1:5790438/150‑1 (MQ=32) ctcAGCCCACATCCATGTGGGCTGCGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTgg > 1:1198870/3‑150 (MQ=12) ctcAGCCCACATCCATGTGGGCTGCGGGCGCGTTTTACAGGGATGTTACATAGCGCCCGACCCGGAAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑AGCCAGATCCCGGGGGTGCAGGGGGCGGCCGCGATTgg > 1:4562051/3‑150 (MQ=11) ctcAGCCCACATCCATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTgg > 2:1023937/3‑150 (MQ=12) ctcAGCCCACATCCATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTgg > 2:1181293/3‑150 (MQ=12) gCAGCCCCCATGGTTGTGGGCTGCGGGCGCTTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGg‑c < 1:5567290/150‑1 (MQ=255) acAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCA‑GGGGCGGCGGCGATTGg‑cc < 1:2343031/149‑1 (MQ=17) gCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGg‑ccgc < 2:2346803/150‑1 (MQ=32) gCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGg‑ccgc > 1:336642/1‑150 (MQ=32) gCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGACTGg‑ccgc > 2:1076476/1‑150 (MQ=17) cccACATCCATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGg‑ccgcc > 2:3012319/1‑150 (MQ=17) ccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGccc > 1:1584444/1‑150 (MQ=32) ccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGccc > 1:178654/1‑150 (MQ=32) ccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGA‑TTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑Ccccccc > 1:2023595/1‑150 (MQ=12) cacaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGcccc > 1:591525/1‑150 (MQ=32) cacaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGcccc > 1:3876435/1‑150 (MQ=32) cacaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGcccc > 1:486947/1‑150 (MQ=32) cacaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGcccc < 2:274546/150‑1 (MQ=32) acaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGccccc > 2:3594410/1‑150 (MQ=32) acaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGccccc > 1:3744190/1‑150 (MQ=32) acaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGccccc < 1:3813234/150‑1 (MQ=32) acaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGccccc > 1:2545654/1‑150 (MQ=32) acaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGccccc > 1:4061281/1‑150 (MQ=32) aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCTCGCAGCGGCGATTTTGTT‑CGCCCGAGCCCGGGGGTGCAGGGGGCCGCGGCGCTTTG‑ccccccccgg > 1:5142089/1‑148 (MQ=11) aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTg > 2:6669946/1‑150 (MQ=32) aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAGTGG‑CCGCCCCCTg > 2:5038810/1‑150 (MQ=17) gATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTg‑cgc > 1:5325296/1‑150 (MQ=32) tgtgggctgtgggcGAGTTTTACTGGGTTGTAACCTCGCGCCCTACGGGGTAGCCTTACGGGTTAAGTCGAGGGCACCGCGCAGCGGCTATTTTTTT‑GGCCTGTGCCGGGGGGTGCTGGGGGGGGCGGCGATGGG‑CCGCCCCGTg‑cgcgc < 2:3634154/150‑1 (MQ=255) ggCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCt > 2:5585235/1‑150 (MQ=32) cTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCAG‑CGCGCTCCTTg > 1:5726181/1‑150 (MQ=17) ggCGCTTTTTACCGGGATGTTCCCGCGCGCCCGACCGGGTCGCCTTACGGGATATGTGGCGGGCACCGCGCAGCGGCTTTTTTGTT‑CGCCAGCGCCGGGGGGTGCTGGGGGGGGCGGCGTTTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCa < 2:5535570/150‑1 (MQ=11) ggCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCa > 1:208613/1‑150 (MQ=32) gcggtttttACTGGTTTGTTACCTCGCGCCCGACCGGGTCGCCGTATGGTATATGTGGTGGGCACCGCGCCGGGGCTTTTTTGTT‑CGCCAGCGCCCGGGGGGGCCGGGGGCGGCGGCTATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAg < 2:3767465/145‑1 (MQ=2) gcgcGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAg > 2:557280/1‑150 (MQ=32) gcgcGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCAG‑CGCGCTCCGTGCGCCAg > 1:3036550/1‑150 (MQ=17) cgcgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAgg > 1:4528875/1‑149 (MQ=17) ttttACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAGTGG‑CCGCCCCCTG‑CGCGCTCCGTGCGCCAGTGGCa > 1:3368240/1‑150 (MQ=21) ttACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAat > 2:4246375/1‑150 (MQ=35) aGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGt > 1:1479260/1‑150 (MQ=255) aGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGt > 2:3105123/1‑150 (MQ=255) aGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCCTGG‑CCGCCCCCTG‑CGCGCTCCGTGCGCCCGGGGCAATATgg > 1:1456644/1‑149 (MQ=11) aGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCGG‑CGCGCTCCATGCGCCAGTGGCAATATGt > 1:2796747/1‑150 (MQ=255) ggtaTGTTACCTCGCGCCCGACCGGTTAGCCGTAAGGGATATTTCGTGGGCACCGCGCAGCGGCTATTTTGTT‑CGCCAGCGCCGGGGGGTGCTGGGGGGGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGtt < 2:4975864/147‑1 (MQ=14) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGtt > 2:4564756/1‑150 (MQ=40) aTGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGACAGGGGGTGCCGGGGGCGGCGGCGGTTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGGGGCAATATGTTGCt > 1:429602/1‑150 (MQ=14) gTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTa > 2:2615126/1‑150 (MQ=255) ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGTGGGGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAg > 2:1797080/1‑150 (MQ=255) ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAGTGG‑CCGCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAg > 1:3473551/1‑150 (MQ=255) aCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCt > 1:3595478/1‑150 (MQ=255) ccTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGGTGGG‑CCGCCCCCAG‑CGCGCTCCGTGCGCCAGTGGCACTATTTTTGTTAtctc > 1:1706353/1‑150 (MQ=11) ccTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTc > 2:1896718/1‑150 (MQ=255) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCa > 2:5278311/1‑150 (MQ=255) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCa > 2:1940879/1‑150 (MQ=255) tCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCGTGG‑CCCCCCCCAG‑CGCGCGCCATGCGCCCGGGGCAAGAAGTTGCGTAGcgccg > 1:5603254/1‑146 (MQ=11) tCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCAt > 2:6350489/1‑150 (MQ=255) cgcgCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCACCTTGCGCCCGTGGCAATATGTTGCTTAGCTCATg > 1:6348202/1‑150 (MQ=255) ccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAgg > 2:682657/1‑150 (MQ=255) ccggttAGCCGTATGGTATATGTCGAGGGCACCGCGCTGCGGCTTTTTTGTT‑CGCCTGCGCCGGGGGGTGCCGGGGGCGGCGGCGTTTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcg < 2:6070022/145‑1 (MQ=17) ccgggTAGCCTTATGGTATATGTGGTGGGCCCCGCGCGGGGGCTTTTTTGTT‑CGCCAGCGCCGGGGGGTGCTGGGGGGGGGGGCTTTTGG‑CCGCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcg < 2:3744190/147‑1 (MQ=12) cccGGTTGCCTTATGGTATACGTCGAGGGCACGGCGCTGCGGCGATTTTGTT‑CGCCTGAGCCCGGGGGTGCCGGGGGCGGCGGCTTTTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcg < 2:4389712/150‑1 (MQ=17) ccGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGACCCCGGGGGTGCACGGCGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcgc > 2:5840533/1‑150 (MQ=255) ccGTATGGGATAAGTCGAGGGCCCCGCGCCGGGGCGATTTTGTG‑CGCCAGAGCCGGGGGGTGCAGGGGGCGGGGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAga < 2:3866307/150‑1 (MQ=18) cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAAAATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgat > 2:5424080/1‑150 (MQ=255) cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAGTGG‑CCCCCCCCGG‑CGCGCGCCATGCGCCCGGGGCCAAATGTTGCTTAGCGCAAGAAAGGAGCGCAACAAcat > 1:3696585/1‑150 (MQ=17) gTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTTG‑CCGCCCCCTG‑CGCCCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgatg > 1:4985133/1‑150 (MQ=255) tAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCCGCGATTGG‑CCCCCCCCAT‑CGCGCACCAATCGCCAATGGCAAAAATTTTCTTATCTCAAGAAACGAGCGCAACAagaaga > 2:6170324/1‑150 (MQ=14) ggATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATgaagaa > 2:3220985/1‑150 (MQ=255) aTAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGGTTGG‑CCGCCCCCAG‑CGCGCTCCGTGCGCCAGTGGCAATATTTTTGTTATCTCATGAAAGGAGCGCAACAAGATGTTGTAta > 1:104591/1‑149 (MQ=17) tCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCACGGGGCGGCGGCGATTTG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCAAGAAAGGAGCGCAACAAGATGATGAATCAACat > 2:2309858/1‑150 (MQ=255) gAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCCGGGGTGCACGGGGCGGCGGCGAGTTG‑CCCCCCCCCG‑CGCGCTCCGTGCGCCCCTGGCAAAATGTTGCTTAGCGCGAGAAAGGGGCGCCACAAGATTATTGATCAACataa > 1:871020/1‑149 (MQ=17) cACGGCGCTGCGGGTTTTTTGTT‑GGCCTGAGCCGGGGGGTGCTGGGGGGGGCGGGGTTTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATaacaa < 2:4458032/150‑1 (MQ=21) ccGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAacaaca > 2:5988971/1‑150 (MQ=255) gcgATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGTGCAACAAGATGATGAATCAACATATAACAACATCTTaaaaaa > 2:3370168/1‑150 (MQ=255) ttttttGTT‑CGCCCGGGGGGGGGGGGGCGGGGGGGGGGGGGGGTGGG‑CCCCCCCCGC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAg < 1:237937/148‑1 (MQ=255) tttttGTTGCGCCTGCGCCGGGGGGGGCCGGGGGGGGGGGCTTTGGC‑CCCCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAg < 2:3711537/149‑1 (MQ=255) tttGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCCCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCAAGAAAGGAGCGCAAAAAGATGATGAATCAACATAAAACAACATCTTaaaaaaacgac > 2:4707894/1‑146 (MQ=25) tt‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGAc > 2:4393984/1‑150 (MQ=255) agagCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCGCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACg > 2:3139002/1‑150 (MQ=255) gcggggggggGCTGGGGGGGGGGGCGTGGGG‑CCGCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCa < 2:5871347/146‑1 (MQ=255) gCCGGGGGGTGCTGGGGGCGGCGGGGTTGGG‑CCGCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCa < 2:5992586/150‑1 (MQ=255) ccgggggggTGCCGGGGGCGGCGG‑GTTTGGCCCCCCCCCTC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCa < 1:3254207/146‑1 (MQ=255) ggggggggTGCGGGGGGGGGGGGCTTTTGC‑CCGCCCCCGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAg < 1:6068684/147‑1 (MQ=38) gggggTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGcc > 2:5669585/1‑150 (MQ=255) tGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg > 1:5170431/1‑150 (MQ=255) gctggggggggCGGGGTTTGC‑CCCCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGc < 2:1811499/147‑1 (MQ=38) ggggCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGtta > 2:4093966/1‑150 (MQ=255) ggggCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGtta > 2:6211384/1‑150 (MQ=255) ggggcggccAATCG‑CCGCCGCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaatt > 1:6524532/3‑150 (MQ=255) ggggggcgTTGGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaatta < 1:1096096/146‑1 (MQ=255) gggggcgATGGG‑CCGCCCCCCG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaattaa < 1:400584/147‑1 (MQ=255) ggcggccAATCG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTAGCTTAGAGCATGAAAGGAGCGCAACAAGAAGATGAATCAACATATAACAACATCTTAAAAAATGGCCTGACATTAAGCCATGACTTCTGAGttaattta > 2:880532/1‑148 (MQ=37) ggggtttGG‑GCCCCCCCGGCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATc < 2:1959892/145‑1 (MQ=255) gcgATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCAc > 1:2583142/1‑150 (MQ=255) gcgATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCAc > 1:2583084/1‑150 (MQ=255) ggATGGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACg < 2:1553316/149‑1 (MQ=255) gATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGc > 2:2268255/1‑150 (MQ=255) gATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGc > 2:6561767/1‑150 (MQ=255) tGG‑CCGCCCGATG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCttt < 2:4929043/150‑1 (MQ=255) | GGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTT‑CGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCCCTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTT > NC_000913/915066‑915364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |