| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4135600 = | 212 (1.300) | 6 (0.040) | 3/266 | NT | 3.0% | coding (1766/2181 nt) | katG | catalase‑peroxidase HPI, heme b‑containing |
| ? | NC_000913 | 4135675 = | 180 (1.160) | coding (1841/2181 nt) | katG | catalase‑peroxidase HPI, heme b‑containing | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATTGCTCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4135754‑4135600‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTC > NC_000913/4135675‑4135823 ATTGCTCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGT < 1:830080/150‑1ATTGCTCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGT < 2:1619616/150‑1ATTGCTCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCAATCAGCAGTGACTCGGT < 2:865324/150‑1 TTGCTCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTG > 1:1599942/1‑150 TTGCTCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTG > 2:1994493/1‑150 GCTCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGT < 1:807737/150‑1 CTCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTG < 2:2022712/150‑1 CTCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTG < 1:2632602/150‑1 CTCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTG > 2:1953032/1‑150 CTCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTG < 1:596942/150‑1 TCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTGG > 1:948453/1‑150 TCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTGG > 2:824441/1‑150 TCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTGG > 2:1758738/1‑150 TCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTGG > 2:1719834/1‑150 TCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTGG > 2:1719776/1‑150 TCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTGG < 1:661681/150‑1 CGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTAT > 1:1329135/1‑150 CGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTAT > 1:1329242/1‑150 CCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTG > 1:2647131/1‑150 CCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTG > 1:2300060/1‑150 GATCAGCAGTGACTCGGTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGAC < 2:1329242/150‑1 GATCAGCAGTGACTCGGTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGAC < 2:1329135/150‑1 GGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCT > 1:2371706/1‑150 GGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGTGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTC < 1:2584734/150‑1 ATTGCTCAATACGCCAACGCGGTCAGTGAAGACGCCGTTTTTGCTGCCATCGAAGTTGGCACCCAGTACACGCATGCCGCCCACCAGCGCAGTCATTTCCGGCGCGGTCAGCGTCAGTTGCTGTGCTTTGTCGATCAGCAGTGACTCGGTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4135754‑4135600‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTC > NC_000913/4135675‑4135823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |