| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4516889 | 191 (1.180) | 5 (0.030) | 3/276 | NT | 2.6% | coding (829/954 nt) | fecR | anti‑sigma transmembrane signal transducer for ferric citrate transport; periplasmic FecA‑bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator |
| ? | NC_000913 | = 4516925 | 183 (1.130) | coding (793/954 nt) | fecR | anti‑sigma transmembrane signal transducer for ferric citrate transport; periplasmic FecA‑bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4516779‑4516889‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGCCTGAGCGGGACGTTCCCGCTGAAAAATACCGATGCGATCCTGAACGTTATCGCGCAAACGCTTCCCGTTAAAATTCAGTCTATTACGCGGTACTGGATAAACAT < NC_000913/4516925‑4516777 GTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATTACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCCGCAACGGCGTTCTGCGCTGCGATCCCGCCGTTGCCGGG < 2:2082463/150‑1GTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGG < 2:2082527/150‑1GTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGG < 2:403896/150‑1 ATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCCGCAACGGCGTGCTGCGCTGCGATCCCGCC > 1:1109209/1‑72 ATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCCGCAACGGCGTGCTGCGCTGCGATCCCGCC < 2:1109209/72‑1 CCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGCCTGAGCGGGACGTTCCCGCTGAAAAATACCGATGCGATCCTGAACGTTATCGCGCAAACGCTTCCCGTTAAAATTCAGTCTATTACGCGGTACTGGATAAACct > 2:1141945/1‑148 CCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGCCTGAGCGGGACGTTCCCGCTGAAAAATACCGATGCGATCCTGAACGTTATCGCGCAAACGCTTCCCGTTAAAATTCAGTCTATTACGCGGTACTGGATAAACAT > 1:2599740/1‑150 CCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGCCTGAGCGGGACGTTCCCGCTGAAAAATACCGATGCGATCCTGAACGTTATCGCGCAAACGCTTCCCGTTAAAATTCAGTCTATTACGCGGTACTGGATAAACAT > 2:2138799/1‑150 GTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4516779‑4516889‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGCCTGAGCGGGACGTTCCCGCTGAAAAATACCGATGCGATCCTGAACGTTATCGCGCAAACGCTTCCCGTTAAAATTCAGTCTATTACGCGGTACTGGATAAACAT < NC_000913/4516925‑4516777 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |