New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3596180 =161 (0.990)6 (0.040) 3/262 NT 3.6% coding (224/927 nt) livH branched‑chain amino acid ABC transporter permease
?NC_000913 3596256 = 170 (1.110)coding (148/927 nt) livH branched‑chain amino acid ABC transporter permease
Rejected: Frequency below/above cutoff threshold.

Only 100 of 210 total aligned reads displayed.

CACCGGGCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAA  >  NC_000913/3596107‑3596405
                                                                                                                                                     |                                                                                                                                                     
cACCGGGCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCTTAATTGAGACGGAGCTGcc                                                                                                                                                       >  1:2373869/1‑150 (MQ=255)
  catcggctacaccatggtttacggcattatcggcatgatcaacttcgcccacggcgaggtttatatgattgGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCaa                                                                                                                                                     >  1:1402624‑M1/72‑150 (MQ=255)
   cGGGCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAAt                                                                                                                                                    >  2:1870457/1‑150 (MQ=255)
     ggCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCa                                                                                                                                                  >  1:356856/1‑150 (MQ=255)
      gCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCat                                                                                                                                                 <  1:597813/150‑1 (MQ=255)
       cGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCata                                                                                                                                                >  1:267329/1‑150 (MQ=255)
       cGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCata                                                                                                                                                <  1:1740643/150‑1 (MQ=255)
       cGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCata                                                                                                                                                <  2:2563468/150‑1 (MQ=255)
          tAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTCTCAATGCCCATCATCATCAGCGCGGCGCGGATCATAAATGAGACGTAGCTGCCAATCATATaa                                                                                                                                             >  2:539461/1‑150 (MQ=255)
          tAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGTGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATaa                                                                                                                                             >  1:1197661/1‑150 (MQ=255)
                aCCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCg                                                                                                                                       >  1:1450454/1‑150 (MQ=255)
                   cGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCg                                                                                                                                    >  2:210191/1‑150 (MQ=255)
                        gATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGc                                                                                                                               >  2:1381587/1‑150 (MQ=255)
                        gATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGc                                                                                                                               >  1:343123/1‑150 (MQ=255)
                        gATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGc                                                                                                                               <  2:22763/150‑1 (MQ=255)
                          tACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGa                                                                                                                             >  1:1688432/1‑150 (MQ=255)
                             tCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGTATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGTTGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGt                                                                                                                          <  1:2222676/150‑1 (MQ=255)
                                aGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGa                                                                                                                       >  1:871577/1‑150 (MQ=255)
                                  ccGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATc                                                                                                                     >  1:1908704/1‑150 (MQ=255)
                                  ccGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATc                                                                                                                     >  2:2745746/1‑150 (MQ=255)
                                  ccGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATc                                                                                                                     <  1:2290393/150‑1 (MQ=255)
                                      aGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGc                                                                                                                 <  2:502058/150‑1 (MQ=255)
                                       ggCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGcc                                                                                                                >  1:2109217/1‑150 (MQ=255)
                                           cTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATa                                                                                                            <  2:505232/150‑1 (MQ=255)
                                            tGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATaa                                                                                                           >  1:915898/1‑150 (MQ=255)
                                                aaTGACGATTGCGCCGACGACTCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGcc                                                                                                       <  2:854642/150‑1 (MQ=255)
                                                aaTGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATACATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGcc                                                                                                       <  1:1532471/150‑1 (MQ=255)
                                                       aTTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAAcc                                                                                                >  2:1410262/1‑150 (MQ=255)
                                                          gcgcCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATg                                                                                             <  2:2600636/150‑1 (MQ=255)
                                                          gcgcCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATg                                                                                             <  2:1869128/150‑1 (MQ=255)
                                                          gcgcCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATg                                                                                             <  1:494147/150‑1 (MQ=255)
                                                          gcgcCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATg                                                                                             <  2:2555094/150‑1 (MQ=255)
                                                          gcgcCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATg                                                                                             <  2:909717/150‑1 (MQ=255)
                                                             ccGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGgtg                                                                                          <  2:555719/150‑1 (MQ=255)
                                                              cgacgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGgtgt                                                                                         >  2:2328492/1‑150 (MQ=255)
                                                              cgacgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGgtgt                                                                                         >  2:1193466/1‑150 (MQ=255)
                                                                 cgaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGc                                                                                      <  1:1388856/150‑1 (MQ=255)
                                                                  gaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGcc                                                                                     >  1:1072267/1‑150 (MQ=255)
                                                                  gaATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGcc                                                                                     >  1:1575077/1‑150 (MQ=255)
                                                                   aaTCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCg                                                                                    >  1:1251692/1‑150 (MQ=255)
                                                                    gattggcagctacgtctcatttatgatcatcgccgcgctgatgatgatgggcattgataccggctggctgctggtagctgcCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGa                                                                                   >  2:2169953‑M2/82‑150 (MQ=255)
                                                                    gattggcagctacgtctcatttatgatcatcgccgcgctgatgatgatgggcattgataccggctggctgctggtagctgcCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGa                                                                                   >  2:576304‑M2/82‑150 (MQ=255)
                                                                    aTCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGa                                                                                   <  1:654364/150‑1 (MQ=255)
                                                                    aTCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGa                                                                                   <  2:55060/150‑1 (MQ=255)
                                                                      ttggcagctacgtctcatttatgatcatcgccgcgctgatgatgatgggcattgataccggctggctgctggtagctgcCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATg                                                                                 >  1:456833‑M2/80‑150 (MQ=255)
                                                                       ccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGACGTTGATCATGCCGTTAATGCCGTAAACCAGGGTGTAGCCGATgg                                                                                >  2:1307030/1‑150 (MQ=255)
                                                                       ccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATgg                                                                                >  2:2664150/1‑150 (MQ=255)
                                                                       ccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATgg                                                                                >  2:2403044/1‑150 (MQ=255)
                                                                       ccGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATgg                                                                                <  1:1870457/150‑1 (MQ=255)
                                                                        cGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGc                                                                               >  2:2215477/1‑150 (MQ=255)
                                                                        cGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGc                                                                               >  2:2016105/1‑150 (MQ=255)
                                                                         GCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCt                                                                              <  1:2402399‑M1/150‑1 (MQ=255)
                                                                             CTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCa                                                                          <  1:1990969‑M1/150‑1 (MQ=255)
                                                                               ACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAgc                                                                        <  2:277936‑M1/150‑1 (MQ=255)
                                                                                 cagcagCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAgcgc                                                                      >  1:825993/1‑150 (MQ=255)
                                                                                     agccagccGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAg                                                                  <  1:123255/150‑1 (MQ=255)
                                                                                     agccagccGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAg                                                                  >  2:247871/1‑150 (MQ=255)
                                                                                     agccagccGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAg                                                                  <  1:684882/150‑1 (MQ=255)
                                                                                          gccGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACt                                                             >  2:1407229/1‑150 (MQ=255)
                                                                                          gccGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACt                                                             >  2:2223061/1‑150 (MQ=255)
                                                                                              gTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGccc                                                         >  2:1716641/1‑150 (MQ=255)
                                                                                                aTCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAg                                                       >  2:19697/1‑150 (MQ=255)
                                                                                                aTCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAg                                                       >  2:617482/1‑150 (MQ=255)
                                                                                                 tCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGc                                                      >  2:515935/1‑150 (MQ=255)
                                                                                                 tCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGc                                                      >  2:1645901/1‑150 (MQ=255)
                                                                                                     tGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGa                                                  <  2:123822/150‑1 (MQ=255)
                                                                                                      gCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGAc                                                 <  1:2466294/150‑1 (MQ=255)
                                                                                                         catcatcatCAGCGCGGCGATGATCATAAATGAGCCGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAATCCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGcc                                              >  1:1413519/1‑150 (MQ=255)
                                                                                                         catcatcatCAGCGCGGCGATGATCATAAATGAGCCGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGcc                                              >  1:1413649/1‑150 (MQ=255)
                                                                                                          atcatcatcAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGTCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCg                                             >  1:554747/1‑150 (MQ=255)
                                                                                                          atcatcatcAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCg                                             <  2:1136081/150‑1 (MQ=255)
                                                                                                            catcatcaGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGtt                                           >  2:441642/1‑150 (MQ=255)
                                                                                                              tcatcaGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTaa                                         <  1:839609/150‑1 (MQ=255)
                                                                                                                atcaGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAAc                                       <  1:1665107/150‑1 (MQ=255)
                                                                                                                atcaGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAAc                                       >  1:2268547/1‑150 (MQ=255)
                                                                                                                  caGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACAt                                     >  1:1806963/1‑150 (MQ=255)
                                                                                                                   aGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATc                                    >  2:1480985/1‑150 (MQ=255)
                                                                                                                   aGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATc                                    >  2:1374080/1‑150 (MQ=255)
                                                                                                                    gcgcGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATct                                   <  1:1715433/150‑1 (MQ=255)
                                                                                                                    gcgcGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATct                                   >  1:2648217/1‑150 (MQ=255)
                                                                                                                     cgcgGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATctg                                  <  1:1165364/150‑1 (MQ=255)
                                                                                                                     cgcgGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATctg                                  <  1:930840/150‑1 (MQ=255)
                                                                                                                     cgcgGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATctg                                  >  2:1743135/1‑150 (MQ=255)
                                                                                                                        ggcgATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATctgctg                               <  1:1393640/150‑1 (MQ=255)
                                                                                                                         ttgataccggctggctgctggtagctgcCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCtgctgc                              <  1:2169953‑M2/122‑1 (MQ=255)
                                                                                                                              gatCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGaa                         >  2:2308554/1‑150 (MQ=255)
                                                                                                                              gatCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGaa                         >  2:394851/1‑150 (MQ=255)
                                                                                                                                 cATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGACGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATa                      <  2:584640/150‑1 (MQ=255)
                                                                                                                                  aTAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATAc                     >  1:1202075/1‑150 (MQ=255)
                                                                                                                                  aTAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATAc                     >  2:192579/1‑150 (MQ=255)
                                                                                                                                    aaaTGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACaa                   <  2:1450454/150‑1 (MQ=255)
                                                                                                                                     aaTGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACaaa                  <  2:2165649/150‑1 (MQ=255)
                                                                                                                                     aaTGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACaaa                  >  1:1554511/1‑150 (MQ=255)
                                                                                                                                      aTGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACaaaa                 <  1:2143575/150‑1 (MQ=255)
                                                                                                                                           aCGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGc            <  2:1850548/150‑1 (MQ=255)
                                                                                                                                                gctgcCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGa       >  1:421493‑M2/6‑150 (MQ=255)
                                                                                                                                                 ctgcCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGAc      >  2:735742‑M2/5‑150 (MQ=255)
                                                                                                                                                   gcCAATCATATAATCCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACGATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAATCATCTGCTGCTTGAAATACAAAATCTGCTCTGACAt    >  2:1562786‑M2/3‑150 (MQ=255)
                                                                                                                                                     cAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCCATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATaa  <  1:13743/150‑1 (MQ=255)
                                                                                                                                                     cAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCCATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATaa  <  1:2745746/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CACCGGGCGGTAAGCCACCCGTTCGATACTCCAGCCGTAGGCGCTGGCAATGACGATTGCGCCGACGAATCCCGCAGCTACCAGCAGCCAGCCGGTATCAATGCCCATCATCATCAGCGCGGCGATGATCATAAATGAGACGTAGCTGCCAATCATATAAACCTCGCCGTGGGCGAAGTTGATCATGCCGATAATGCCGTAAACCATGGTGTAGCCGATGGCTATCAGCGCGTAGGTACTGCCCAGCGTGACGCCGTTAAACATCTGCTGCAAGAAATACAAAAACTGCTCAGACATAA  >  NC_000913/3596107‑3596405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.