Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 4,640,551 IS1 (–) +9 bp 100% intergenic (+9/‑383) yjjY → / → yjtD uncharacterized protein/putative methyltransferase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)111 (1.410) 85/278 NT 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4640551 = 0 (0.000)intergenic (+9/‑391) yjjY/yjtD uncharacterized protein/putative methyltransferase
* ? NC_000913 = 3584195NA (NA)104 (1.330) 81/276 NT 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 4640559 0 (0.000)intergenic (+17/‑383) yjjY/yjtD uncharacterized protein/putative methyltransferase

Only 100 of 113 total aligned reads displayed.

CGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3584046‑3584195
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGAACGCAATTACGTAC  <  NC_000913/4640559‑4640411
                                                                                                                                                                                                                                                                                                           
CGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC                                                                                                                                                       <  1:1348122/150‑1
CGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC                                                                                                                                                       <  2:1178548/150‑1
  AATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCc                                                                                                                                                     >  2:77974/1‑149
     TGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCC                                                                                                                                                  >  2:625072/1‑150
          GGCATAACCTGAATCTGAGGGCGCAAGTGGCACGGCGGGGACGGAAGTCGCTGGAGTTCTCAAAATCGGTGGATCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCT                                                                                                                                             <  2:1236787/150‑1
           GCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTT                                                                                                                                            <  2:918451/150‑1
           GCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTT                                                                                                                                            >  2:315731/1‑150
           GCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTT                                                                                                                                            >  2:1222039/1‑150
             ATAACCTGAATCTGAGGCAGCACCTGGCACGGCGGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAG                                                                                                                                          <  2:1280236/150‑1
              TAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGC                                                                                                                                         <  2:310985/150‑1
                    tAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTA                                                                                                                                   <  2:1202665/149‑1
                      ATCTGAGGCAGCACCTGGCACGGCTGGGACGGATGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCTTCGGGCAGTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATG                                                                                                                                 <  2:856752/150‑1
                      ATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGGCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATG                                                                                                                                 <  1:527573/150‑1
                        CTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTT                                                                                                                               <  1:434852/150‑1
                         TGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAAGATAATACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTG                                                                                                                              >  1:570237/1‑150
                         TGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTG                                                                                                                              >  2:967794/1‑150
                          GAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGC                                                                                                                             >  2:147571/1‑150
                          GAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGC                                                                                                                             <  2:720755/150‑1
                           cGGCAGCACCTGGCACGGCTGGGACGGAAGGCGCGGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCT                                                                                                                            <  2:1074905/149‑1
                            GGCAGCCCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGCGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCGCTTAGCCTGTTATGTTGCTG                                                                                                                           >  2:1131648/1‑150
                               AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAAAATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCGCTGTTAGCCTGTTATGTTGCTGTTt                                                                                                                        >  2:38566/1‑149
                                GCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAATGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTTGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAA                                                                                                                       <  2:234482/150‑1
                                 CACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAA                                                                                                                      >  2:966356/1‑150
                                   CCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAAT                                                                                                                    >  1:1009882/1‑150
                                    CTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATG                                                                                                                   <  2:888115/150‑1
                                     TGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGG                                                                                                                  <  2:964276/150‑1
                                     TGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGG                                                                                                                  <  2:288118/150‑1
                                     TGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGG                                                                                                                  <  1:723273/150‑1
                                        CACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTA                                                                                                               >  1:434074/1‑150
                                          CGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGG                                                                                                             <  2:323474/150‑1
                                           GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGA                                                                                                            <  1:725547/150‑1
                                             CTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATG                                                                                                          <  2:1136056/150‑1
                                                  ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGC                                                                                                     <  1:859563/150‑1
                                                  ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGC                                                                                                     <  1:1191934/150‑1
                                                  ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGGTATGTTGCTGTTAAAATGGTTAGGATGACAGC                                                                                                     >  1:115357/1‑150
                                                   CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCC                                                                                                    >  1:532436/1‑150
                                                        GTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTT                                                                                               <  1:361665/150‑1
                                                                CGTTCTCAAAATCTGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCGCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTG                                                                                       <  2:54524/150‑1
                                                                 GTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATAACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGT                                                                                      >  1:534421/1‑150
                                                                      CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACCCTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGT                                                                                 >  1:819568/1‑150
                                                                      CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGT                                                                                 >  2:409476/1‑150
                                                                      CAAAATCGGTGGAGCTGCATGACAAAGTCAACGGCCATTATCTGAACATAAAACACAATCAAAAAGTAGTAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTTAAATGGTAAGGATTCAAGCCGTTTTTGACACTGTCGGGT                                                                                 >  2:1170330/1‑150
                                                                        AAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACCCTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCC                                                                               <  2:1036299/150‑1
                                                                          ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACACGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTG                                                                             >  1:339714/1‑150
                                                                             GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAATACTCTATAAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGG                                                                          <  2:81367/150‑1
                                                                             GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGG                                                                          >  1:878204/1‑150
                                                                             GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGG                                                                          >  1:858827/1‑150
                                                                                 GAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAA                                                                      <  1:794174/150‑1
                                                                                  AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAG                                                                     <  1:1166177/150‑1
                                                                                     TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTAC                                                                  <  1:967794/150‑1
                                                                                      GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACC                                                                 <  2:255458/150‑1
                                                                                      GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACC                                                                 >  2:1056131/1‑150
                                                                                         TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCATGAGGGAAAGTACCCAC                                                              >  2:90620/1‑150
                                                                                         TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGATGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCAC                                                              <  1:711210/150‑1
                                                                                         TGACAAAGTCATCGGACATTATCTGATCATAAAACTCTATCATTAAGTTGGAGGCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTCGTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCGGAGGGAAAGTACCCAC                                                              <  2:731313/150‑1
                                                                                            CAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGAC                                                           >  2:560060/1‑150
                                                                                              AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTATGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCA                                                         <  1:1009103/150‑1
                                                                                              AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCA                                                         >  2:558642/1‑150
                                                                                                 gCATCGGGCATTATCTGAACCTAACACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGC                                                      <  1:251055/149‑1
                                                                                                      GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATG                                                 >  1:1009962/1‑150
                                                                                                       GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGGCAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCGAGCTAATGA                                                >  1:1015146/1‑150
                                                                                                       GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGA                                                <  2:4355/150‑1
                                                                                                       GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGACCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGA                                                <  1:534560/150‑1
                                                                                                        GCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGAT                                               >  1:1270244/1‑150
                                                                                                        GCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTAATTTCCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGAT                                               <  2:814404/150‑1
                                                                                                           TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTT                                            <  2:1017888/150‑1
                                                                                                            aATCTGAACATAAAACACTATCAATAAGTTGGAGGCATTACCCGGCCCCTCTAAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTG                                           <  2:44614/149‑1
                                                                                                                TGAACATAAAACCCAATAAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTGGCTGTTAAAATGGATAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGA                                       <  2:637867/150‑1
                                                                                                                 GAACATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGAC                                      >  1:503434/1‑150
                                                                                                                    CATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCTTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTT                                   <  2:1060596/150‑1
                                                                                                                    CATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTT                                   <  1:518302/150‑1
                                                                                                                    CATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTT                                   <  2:1153965/150‑1
                                                                                                                    CATAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTT                                   <  2:459701/150‑1
                                                                                                                     ATAAAACACTATAAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTG                                  <  1:1033123/150‑1
                                                                                                                      TAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGA                                 >  1:440384/1‑150
                                                                                                                      TAAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGA                                 >  1:446436/1‑150
                                                                                                                       AAAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGAT                                >  2:474091/1‑150
                                                                                                                        AAACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTATGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATG                               <  2:921742/150‑1
                                                                                                                          ACACTATCAATAAGTTGGAGTCATTACCCTGCCCCTCTTAGCCGCGTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGA                             <  1:806174/150‑1
                                                                                                                          ACACTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGA                             >  1:1292957/1‑150
                                                                                                                            ACTATCAATAAGTTGGAGTCATTACCCGGCCACTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAA                           >  1:965836/1‑150
                                                                                                                             aTATCATTATGTTTGAGTCATTACCGTGCGCCTATTAGCATTTTATGTTGCTGTTAAAATGGTTTGTATGCCAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACACACGCCCAAGCTAATGATGTTGTTGACGTTGATGGAAAG                          <  2:240570/149‑1
                                                                                                                             CTATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAG                          >  1:1025605/1‑150
                                                                                                                              TATCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGGTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCCCGCCCAAGCTAATGATGTTGTTGTCGTTGATGGAAAGT                         >  2:506880/1‑150
                                                                                                                                TCAATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGC                       >  1:444437/1‑150
                                                                                                                                   ATAAGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGATAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATC                    <  1:77974/150‑1
                                                                                                                                      AGTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAG                 >  1:878863/1‑150
                                                                                                                                       GTTGGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGA                >  2:582080/1‑150
                                                                                                                                        TTGGACTCAATACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTAACGTTGATGGAAAGTGCATCAAGAA               <  2:122229/150‑1
                                                                                                                                          GGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGAACG             <  1:616999/150‑1
                                                                                                                                          GGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGAACG             <  1:1011636/150‑1
                                                                                                                                          GGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGAACG             >  2:581605/1‑150
                                                                                                                                          GGAGTCATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGAACG             <  1:406983/150‑1
                                                                                                                                               CATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGAACGCAATT        >  2:745725/1‑150
                                                                                                                                               CATTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGAACGCAATT        >  1:217425/1‑150
                                                                                                                                               CATTACCCGGCCCCTCTTAGCCTGTTAAGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGCCCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGAACGCAATT        >  1:491659/1‑150
                                                                                                                                                 TTACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGAACGCAATTAC      <  2:532436/150‑1
                                                                                                                                                  TACCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGAACGCAATTACG     >  2:633214/1‑150
                                                                                                                                                    CCCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCGAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGCACGCAATTACGTA   >  1:1088815/1‑150
                                                                                                                                                     CCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGAACGCAATTACGTAC  <  2:819568/150‑1
                                                                                                                                                                                                                                                                                                           
CGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3584046‑3584195
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGGCCCCTCTTAGCCTGTTATGTTGCTGTTAAAATGGTTAGGATGACAGCCGTTTTTGACACTGTCGGGTCCTGAGGGAAAGTACCCACGACCAAGCTAATGATGTTGTTGACGTTGATGGAAAGTGCATCAAGAACGCAATTACGTAC  <  NC_000913/4640559‑4640411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.