New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4562615 =	93 (1.180)	3 (0.040)	3/262	NT	3.4%	coding (61/1179 nt)	yjiJ	DUF1228 family putative inner membrane MFS superfamily transporter
	?	NC_000913	4562662 =	85 (1.140)					coding (14/1179 nt)	yjiJ	DUF1228 family putative inner membrane MFS superfamily transporter
Rejected: Frequency below/above cutoff threshold.

ATCGCTTTACCCCTCAATCATCGCATTAACAGGCTGGCATGCTTCACCTTTTTGTTATTAACTTGTTAACAACAAAAATGACAAACAAGGTTAAACATGCCTTCGTCCACGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4562771‑4562615 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggatgcGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATA  >  NC_000913/4562662‑4562803                                                                                                                                                                                                                                                                                                             ATCGCTTTACCCCTCAATCATCGCATTAACAGGCTGGCATGCTTCACCTTTTTGTTATTAACTTGTTAACAACAAAAATGACAAACAAGGTTAAACATGCCTTCGTCCACGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTC                                                                                                                                                       <  2:1307922/150‑1  TCGCTTTACCCCTCAATCATCGCATTAACAGGCTGGCATGCTTCACCTTTTTGTTATTAACTTGTTAACAACAAAAATGACAAACAAGGTTAAACATGCCTTCGTCCACGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCG                                                                                                                                                      >  1:528920/1‑150  TCGCTTTACCCCTCAATCATCGCATTAACAGGCTGGCATGCTTCACCTTTTTGTTATTAACTTGTTAACAACAAAAATGACAAACAAGGTTAAACATGCCTTCGTCCACGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCG                                                                                                                                                      <  2:603705/150‑1   CGCTTTACCCCTCAATCATCGCATTAACAGGCTGGCATGCTTCACCTTTTTGTTATTAACTTGTTAACAACAAAAATGACAAACAAGGTTAAACATGCCTTCGTCCACGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGG                                                                                                                                                     <  1:4221/150‑1   CGCTTTACCCCTCAATCATCGCATTAACAGGCTGGCATGCTTCACCTTTTTGTTATTAACTTGTTAACAACAAAAATGACAAACAAGGTTAAACATGCCTTCGTCCACGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGG                                                                                                                                                     <  2:1061132/150‑1        TACCCCTCAATCATCGCATTAACAGGCTGGCATGCTTCACCTTTTTGTTATTAACTTGTTAACAACAAAAATGACAAACAAGGTTAAACATGCCTTCGTCCACGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGGGATGC                                                                                                                                                >  2:1252563/1‑150        TACCCCTCAATCATCGCATTAACAGGCTGGCATGCTTCACCTTTTTGTTATTAACTTGTTAACAACAAAAATGACAAACAAGGTTAAACATGCCTTCGTCCACGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGGGATGC                                                                                                                                                >  2:1257708/1‑150        TACCCCTCAATCATCGCATTAACAGGCTGGCATGCTTCACCTTTTTGTTATTAACTTGTTAACAACAAAAATGACAAACAAGGTTAAACATGCCTTCGTCCACGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGGGATGC                                                                                                                                                <  2:185555/150‑1        TACCCCTCAATCATCGCATTAACAGGCTGGCATGCTTCACCTTTTTGTTATTAACTTGTTAACAACAAAAATGACAAACAAGGTTAAACATGCCTTCGTCCACGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGGGATGC                                                                                                                                                >  2:741346/1‑150                                                                                                                CATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAA                                        >  1:44907/1‑150                                                                                                                     CGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAATCATGACAGCCTGTTAATGCGATGATTGAGGTGTAAAGCGA                                   >  1:116341/1‑150                                                                                                                              CTTTTCTTTCAGCACCGCGCTTTTCGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCTATGATTGAGTGGTAAAGCGATAAAAACGA                          >  1:955199/1‑150                                                                                                                                                      tGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCAAGCCTGTTAATGCGATGATTGAGGTGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATA  >  2:877259/2‑150                                                                                                                                                      CGGTATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATA  <  1:787141/150‑1                                                                                                                                                                                                                                                                                                             ATCGCTTTACCCCTCAATCATCGCATTAACAGGCTGGCATGCTTCACCTTTTTGTTATTAACTTGTTAACAACAAAAATGACAAACAAGGTTAAACATGCCTTCGTCCACGCATCCCGTAGAACGCTTTTCTTTCAGCACCGCGCTTTTCGGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4562771‑4562615 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggatgcGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATA  >  NC_000913/4562662‑4562803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.