| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4579879 = | 68 (0.860) | 3 (0.040) | 3/268 | NT | 4.3% | noncoding (45/77 nt) | symR | sRNA antisense regulator destabilizing divergent and overlapping symE mRNA |
| ? | NC_000913 | 4579905 = | 67 (0.880) | noncoding (71/77 nt) | symR | sRNA antisense regulator destabilizing divergent and overlapping symE mRNA | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTGGACTTTCCCCATATTTACTGATGATATATACAGGTATTTAGCGCGGTGCGGATGTGCGCCAACACACCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4580032‑4579879‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcaCCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTG > NC_000913/4579905‑4580051 TTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTGGACTTTCCCCATATTTACTTATGATATATACAGGTATTTAGCGCGGTGCGGATGTGCGCCAACACACC > 2:130711/1‑150TTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTGGACTTTCCCCATATTTACTGATGATATATACAGGTATTTAGCGCGGTGCGGATGTGCGCCAACACACC > 2:1055067/1‑150TTATTATTTCACGCCAATCAAAACCCACATAAAAATATTTAAATCATTCCAGAAATTGCCCATTTTAATCTATTTTTAGCTGGACTATCCCCATAATTACTGATGATATATACAGGTATTTAGCACGGTGAGGAAGTGCGCAAACACACC > 2:718664/1‑150 TATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTGGACTTTCCCCATATTTACTGATGATATATACAGGTATTTAGCGCGGTGCGGATGTGCGCCAACACACCC < 1:1068503/150‑1 GATGATATATACAGGTATTTAGCGCGGTGCGGATGTGCGCCAACACACCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATT > 2:643506/1‑150 ATATATACAGGTATTTAGCGCGGTGCGGATGTGCGCCAACACACCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATG < 1:643506/150‑1 GCGGTGCGGATGTGCGCCAACACACCCGCATCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGA > 1:236682/1‑150 CCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGG < 1:57147/150‑1 CCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGG < 2:962639/150‑1 CCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGGGAAATAATAAAAAGCGCACCGGAAAGG < 2:999722/150‑1 GCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTG > 1:1268694/1‑150 TTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTGGACTTTCCCCATATTTACTGATGATATATACAGGTATTTAGCGCGGTGCGGATGTGCGCCAACACACCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4580032‑4579879‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcaCCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTG > NC_000913/4579905‑4580051 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |