Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,890,075 IS5 (–) +4 bp coding (1346‑1349/1416 nt) tnaA → tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2290113NA (NA)132 (1.900) 86/286 0.0 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 3890075 = 0 (0.000)coding (1346/1416 nt) tnaA tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent
* ? NC_000913 3652036 =NA (NA)94 (1.350) 63/286 0.1 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 3890078 0 (0.000)coding (1349/1416 nt) tnaA tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent

Only 100 of 221 total aligned reads displayed.

TGTTAGGCCGCGATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCT  >  NC_000913/3889928‑3890223
                                                                                                                                                   |                                                                                                                                                    
gggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                                                                                                     <  2:766281‑M2/2‑1 (MQ=255)
 ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa                                                                                                                                                    <  1:39581‑M2/3‑1 (MQ=255)
 ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa                                                                                                                                                    >  1:671419‑M2/147‑149 (MQ=255)
 ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa                                                                                                                                                    >  2:952299‑M2/147‑149 (MQ=255)
  gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTaa                                                                                                                                                   <  1:951807‑M2/4‑1 (MQ=255)
  gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggagaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTaa                                                                                                                                                   >  1:485562‑M2/146‑149 (MQ=255)
   acaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTaaa                                                                                                                                                  <  1:427085‑M2/5‑1 (MQ=255)
   acaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTaaa                                                                                                                                                  >  2:468258‑M2/145‑149 (MQ=255)
      gCCGCGATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaa                                                                                                                                               <  1:998710‑M2/149‑5 (MQ=255)
       taaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgattactcatgatgatccctgttctatgtctccagatgactaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGAt                                                                                                                                              <  1:777505‑M2/9‑1 (MQ=255)
       gaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGAt                                                                                                                                              >  2:518864‑M2/141‑149 (MQ=255)
         gcgATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggt                                                                                                                                            >  2:339577‑M2/1‑142 (MQ=255)
           gATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAGCACATATGGACTACATTATTGATGCGTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaagctgg                                                                                                                                          <  2:68626‑M2/149‑10 (MQ=255)
              tcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCtt                                                                                                                                       <  2:96245‑M2/16‑1 (MQ=255)
              ccGAAAACCGGAAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaa                                                                                                                                       >  1:1075101‑M2/1‑137 (MQ=255)
               cGAAAACCGGTAAACAACTGCCATGCCCTGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCATACACATATGGACTTCATTATTGAAGCCATTAAACATGTGAAAGAGAACGCGGCGAAAATTAAggaaggtgcgaat                                                                                                                                      <  2:612224‑M2/149‑14 (MQ=255)
                 tttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGTTAATCCTttaa                                                                                                                                    <  1:1033843‑M2/19‑2 (MQ=255)
                  ttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAAcc                                                                                                                                         <  1:1028434‑M2/14‑1 (MQ=255)
                     ccGGTAAACAACTGACATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcgg                                                                                                                                <  1:202761‑M2/149‑20 (MQ=255)
                       gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                                                                                                     <  1:175396‑M2/2‑1 (MQ=255)
                       gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                                                                                                     >  2:175396‑M2/125‑126 (MQ=255)
                       ggTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGCAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcgggg                                                                                                                              <  2:791884‑M2/149‑22 (MQ=255)
                          aaaCAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaa                                                                                                                           >  1:14156‑M2/1‑125 (MQ=255)
                              ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGaaa                                                                                                                       >  2:1116942‑M2/118‑149 (MQ=255)
                              ggcgcttactgctgaattcactggcggcgaaggtaagtggaggactcatgatgaaccctgttctatggctccagatgacaaacatgatctcaaatcagggacttgttcgcaccttccTTAACGGATTAACCTTTACGTACGAACCGaaa                                                                                                                       <  2:201073‑M2/32‑1 (MQ=255)
                                    cATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcgg                                                                                                                 <  2:103650‑M2/149‑35 (MQ=255)
                                       tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGt                                                                                                              >  2:417723‑M2/109‑149 (MQ=255)
                                        gctgaattcactggcggcgaaggtaagttgatgactcatgatgcaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTc                                                                                                             <  2:763013‑M2/42‑1 (MQ=255)
                                         ccGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACACATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgac                                                                                                            >  1:1082194‑M2/1‑110 (MQ=255)
                                            aattcactgtcggcgaaggtaagttgatgactcaagatgaacccttttctatggcaccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCATTACGTACGAACCGAAAGTATTGCGTCACtt                                                                                                         >  1:600836‑M2/104‑149 (MQ=255)
                                                 aCTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat                                                                                                    <  2:1105750‑M2/149‑48 (MQ=255)
                                                     tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCg                                                                                                               <  1:914237‑M2/40‑1 (MQ=255)
                                                     tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCg                                                                                                               >  2:914237‑M2/95‑134 (MQ=255)
                                                      cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCaaaa                                                                                               >  1:327074‑M2/94‑149 (MQ=255)
                                                        gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCa                                                                                                       >  1:740552‑M2/92‑139 (MQ=255)
                                                        gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCa                                                                                                       <  2:740552‑M2/48‑1 (MQ=255)
                                                         gTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAGGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc                                                                                            >  2:551836‑M2/1‑94 (MQ=255)
                                                            tAACCATTACGCGCGCAACATTTACTCAAACACATATGGAATTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                                         >  2:594669‑M2/1‑91 (MQ=255)
                                                              gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAaaga                                                                                       >  1:1015804‑M2/86‑149 (MQ=255)
                                                               taagttgatgactcatgatgaaccctcttctatggctccagatgacaaacatgaacacatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAaagaa                                                                                      >  2:1136514‑M2/85‑149 (MQ=255)
                                                                cATTCCGCGCGCAACATATACTCACACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                     <  1:839068‑M2/149‑63 (MQ=255)
                                                                cATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaatttcttctcggctgactcagtcatttcatttattcattt                                                                                     <  1:1060370‑M2/149‑63 (MQ=255)
                                                                  ttCCGCGCGCAACATATACTCAAACACATCTGGACATCATTATTGAAGCCTTTAAACATGTGAAAGAGCACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                   >  2:883774‑M2/1‑85 (MQ=255)
                                                                   ttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGttt                                                                                  >  1:965484‑M2/81‑149 (MQ=255)
                                                                     cgcgcgCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCCTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                                <  1:893493‑M2/149‑68 (MQ=255)
                                                                      atgactcatgatgaaccctgttctatggctccagatgacgaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTttaat                                                                               <  1:954540‑M2/72‑1 (MQ=255)
                                                                      atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTTCGTCACTTCACCGCAAAACTTAAAGAAGTttaat                                                                               >  2:204805‑M2/78‑149 (MQ=255)
                                                                           tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAAta                                                                          >  2:320228‑M2/73‑149 (MQ=255)
                                                                              tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAAc                                                                                                                                          <  1:1117866‑M2/13‑1 (MQ=255)
                                                                              tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAAc                                                                                                                                          <  1:1184340‑M2/13‑1 (MQ=255)
                                                                              tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAAc                                                                                                                                          >  2:1184340‑M2/70‑82 (MQ=255)
                                                                              cATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt                                                                       <  2:303144‑M2/149‑77 (MQ=255)
                                                                               gatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAAtactac                                                                      >  1:1110697‑M2/69‑149 (MQ=255)
                                                                                tataCTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc                                                                     >  1:524396‑M2/1‑71 (MQ=255)
                                                                                   aCTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc                                                                  <  2:316076‑M2/149‑82 (MQ=255)
                                                                                       ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGc                                                              >  1:588545‑M2/61‑149 (MQ=255)
                                                                                       aaaCACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttaatgtttgagccgattttttctcccgta                                                              <  1:336602‑M2/149‑86 (MQ=255)
                                                                                           acaTATGGACTTCATTATTGAAGCCTTTAAAAATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgcctcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg                                                          <  2:529598‑M2/149‑90 (MQ=255)
                                                                                             atatGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcc                                                        <  2:1098938‑M2/149‑92 (MQ=255)
                                                                                               tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACa                                                                     >  1:869603‑M2/53‑134 (MQ=255)
                                                                                               atGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt                                                      >  1:452256‑M2/1‑56 (MQ=255)
                                                                                                tGGACTTCATTATTGAAGCCTTTAATCATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgattaagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg                                                     <  2:674083‑M2/149‑95 (MQ=255)
                                                                                                ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACATCACCGCAAAACTTAAAGAAGTTTAATTAAtacta                                                                       >  1:1107393‑M2/52‑131 (MQ=255)
                                                                                                    cTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtatatgccttgaata                                                 <  2:621850‑M2/149‑99 (MQ=255)
                                                                                                      tCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag                                               >  1:1058113‑M2/1‑49 (MQ=255)
                                                                                                      agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGc                                               <  1:1132338‑M2/104‑1 (MQ=255)
                                                                                                      agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGc                                               <  1:773776‑M2/104‑1 (MQ=255)
                                                                                                        atgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCa                                             >  2:707368‑M2/44‑149 (MQ=255)
                                                                                                        atgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCa                                             >  1:1167046‑M2/44‑149 (MQ=255)
                                                                                                            caaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTc                                                                                                        >  2:862986‑M2/40‑86 (MQ=255)
                                                                                                            caaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTc                                                                                                        <  1:862986‑M2/47‑1 (MQ=255)
                                                                                                             aaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCActctc                                        >  2:364095‑M2/39‑149 (MQ=255)
                                                                                                              aacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCActctct                                       <  2:476968‑M2/112‑1 (MQ=255)
                                                                                                                catgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAATTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTa                                     <  2:1015804‑M2/114‑1 (MQ=255)
                                                                                                                 gCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagac                                    >  2:989556‑M2/1‑38 (MQ=255)
                                                                                                                   gatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTAccc                                  <  2:254994‑M2/117‑1 (MQ=255)
                                                                                                                   cTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccg                                  <  2:107988‑M2/149‑114 (MQ=255)
                                                                                                                    atctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCt                                 <  1:318824‑M2/118‑1 (MQ=255)
                                                                                                                    atctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTATAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCt                                 >  1:718553‑M2/32‑149 (MQ=255)
                                                                                                                      ctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTAc                               <  1:372144‑M2/120‑1 (MQ=255)
                                                                                                                       tcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCAATAAGGATGTTAGCCACTCTCTTACCCTACa                              >  1:624241‑M2/29‑149 (MQ=255)
                                                                                                                       aaaCATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc                              <  2:842295‑M2/149‑118 (MQ=255)
                                                                                                                        catatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACAt                             >  1:29694‑M2/28‑149 (MQ=255)
                                                                                                                           aTGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                              >  2:1031467‑M2/1‑28 (MQ=255)
                                                                                                                            tcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTc                         >  1:844692‑M2/24‑149 (MQ=255)
                                                                                                                              agggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCaa                       <  2:1167046‑M2/128‑1 (MQ=255)
                                                                                                                              agggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCaa                       >  1:693087‑M2/22‑149 (MQ=255)
                                                                                                                              agggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCaa                       <  2:1124287‑M2/128‑1 (MQ=255)
                                                                                                                               gAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccat                      <  2:586727‑M2/149‑126 (MQ=255)
                                                                                                                                ggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATa                     >  2:401427‑M2/20‑149 (MQ=255)
                                                                                                                                aaaGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                                                                            >  1:223431‑M2/1‑23 (MQ=255)
                                                                                                                                  agagAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                   <  1:512034‑M2/149‑129 (MQ=255)
                                                                                                                                       ttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTgg                                                               <  2:801028‑M2/88‑1 (MQ=255)
                                                                                                                                       ttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTgg                                                               >  1:801028‑M2/13‑100 (MQ=255)
                                                                                                                                          cggcgAATATTAAggaaggtgcgaataagcggggaaattcttctctgatgactcagtcattacatttcttcatggttgagccgattttttctcccgtaaaagccttgaatcagcctaattagaccgtttcttagccatttaaggagtta           <  1:275493‑M2/149‑137 (MQ=255)
                                                                                                                                           caccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGc          <  2:48911‑M2/141‑1 (MQ=255)
                                                                                                                                              gAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc       <  1:546119‑M2/149‑141 (MQ=255)
                                                                                                                                               ttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTc      <  1:244758‑M2/145‑1 (MQ=255)
                                                                                                                                                  cTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACACTACATCCTCAATAACAAAAATAGCCTTCctc   >  2:140347‑M2/2‑149 (MQ=255)
                                                                                                                                                   ttAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCctct  >  1:400577/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TGTTAGGCCGCGATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCT  >  NC_000913/3889928‑3890223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.