| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1068372 = | NA (NA) | 4 (0.010) | 3/258 | NT | NA | noncoding (19/98 nt) | RIP92 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP92 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | 2684124 = | NA (NA) | noncoding (8/98 nt) | RIP186 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP186 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | |||||
TTCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1068527‑1068372‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgatGCGCTACGCTTATCAGGCC > NC_000913/2684124‑2684142 TTCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGG > 2:4064843/1‑150TTCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGG > 1:648157/1‑150TTCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGG < 1:4481386/150‑1 TCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGC > 1:1611863/1‑150 TCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGC < 2:6640185/150‑1 TCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGC < 2:6090483/150‑1 TCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGC < 1:3294793/150‑1 CATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCC > 2:5671171/1‑150 CATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCC > 2:2298587/1‑150 ATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCT > 1:5003021/1‑150 ATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCT > 2:1787639/1‑150 ATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCT < 1:4941408/150‑1 TCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTG > 1:5232073/1‑150 TCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTG > 1:5231969/1‑150 TCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTG > 1:5231984/1‑150 TCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTG > 2:1200882/1‑150 TCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTG > 2:1200813/1‑150 TCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTG > 1:708804/1‑150 AGGAGCCATAAACAGAATACCGCCGGGGGTACCGGCGGTGCAGATTGTTGACATCGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAATACAGTGCAAATTCAATATCTTGCAATCTTCTGGTAGGCCAGAT < 2:4061389/150‑1 AGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTGAT > 2:2342009/1‑150 AGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTGAT > 1:1715397/1‑150 AGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTGAT > 1:1138822/1‑150 ACATAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTGATGCGCGATGCTT < 2:5805735/150‑1 ACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTGATGCGCGATGCTT < 2:5805639/150‑1 AAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTGATGCGCGATGCTTATCA < 1:6149414/150‑1 CCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTGATGCGCGATGCTTATCAGGCC < 2:1161357/150‑1 CCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCC > 2:2002960/1‑57 CCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCC < 1:2002960/57‑1 TTCATCAGGAGCCATAAACAGAAAACCGCCGGGGTTACCGGCGGTGCAGATTGTTGACAACGTACGCATTGTTCATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCAATCTTCTGGTAGGCCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1068527‑1068372‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgatGCGCTACGCTTATCAGGCC > NC_000913/2684124‑2684142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |