| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4477260 = | 303 (0.780) | 12 (0.030) | 7/252 | NT | 4.1% | intergenic (+9/+47) | yjgL/argI | SopA‑central‑domain‑like hexapeptide repeat protein/ornithine carbamoyltransferase 1 |
| ? | NC_000913 | 4477291 = | 278 (0.770) | intergenic (+40/+16) | yjgL/argI | SopA‑central‑domain‑like hexapeptide repeat protein/ornithine carbamoyltransferase 1 | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TATGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4477418‑4477260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccggcatcTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCAAATTCT > NC_000913/4477291‑4477439 TATGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCAT < 1:3166073/150‑1 ATGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATC > 1:239724/1‑150 ATGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATC < 1:3003189/150‑1 ATGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCAAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTCTAAAGATGCCGGGACATACAAACCATC > 2:4081879/1‑150 TGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCC < 1:5831965/150‑1 TGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCC < 1:5675370/150‑1 TGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCC < 1:2725074/150‑1 TGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCC < 1:5643488/150‑1 TGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCC < 2:2541163/150‑1 TGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCAATGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCC > 1:5115642/1‑150 GAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGATAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCG < 1:5414667/150‑1 GAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCG > 1:854776/1‑150 GAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCG > 1:948966/1‑150 GAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCG > 2:3533124/1‑150 GAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCG > 2:1318879/1‑150 AAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCGG > 1:5990780/1‑150 AAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCGG < 2:2457401/150‑1 AAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCGG > 2:4555493/1‑150 AAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCGG < 2:5825092/150‑1 GTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCGGCA > 2:3731198/1‑150 TCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCGGCAT > 1:6493997/1‑150 TTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCGGCAT < 2:6649701/114‑1 TTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCGGCAT > 1:6649701/1‑114 GCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTGTCCGCCTGATCAAAAACAATGC > 2:6688607/1‑150 GCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCGGTGAGAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGC > 2:6688637/1‑150 gcaATAAAGATGCCGGGAAATACAAACCAACCCGGCATCTTTATAGCGATAGCAATTATTTAATGAGCGTAGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTACGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCa > 1:4057394/4‑149 GCTATAAAGATGCCGGGAAATACAAACCATCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCT > 2:5241052/1‑150 TATAAAGATGCCGGGAAATACAAACCATCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCA > 2:5505643/1‑150 TAAAGATGCCGGGAAATACAAACCATCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATC > 1:500285/1‑150 TAAAGATGCCGGGAAATACAAACCATCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATC > 2:265365/1‑150 AGATGCCGGGAAATACAAACCATCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCG > 1:564648/1‑67 AGATGCCGGGAAATACAAACCATCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCG < 1:2870831/67‑1 AGATGCCGGGAAATACAAACCATCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCG < 2:564648/67‑1 AGATGCCGGGAAATACAAACCATCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCG > 2:2870831/1‑67 ATGCCGGGAAATACAAACCATCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGA > 1:1192938/1‑150 TCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGG < 1:6380371/150‑1 TCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGG < 1:5933295/150‑1 CCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCC > 2:5900140/1‑150 CGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATTCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCA > 2:5424693/1‑150 CGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACC < 2:3483506/137‑1 CGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACC > 1:3483506/1‑137 GGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCAA > 1:2020149/1‑150 GCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCAAA > 1:3860886/1‑150 GCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCAAA < 2:467059/150‑1 GCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTA < 1:1981960/61‑1 GCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTA > 2:1981960/1‑61 GCATCTTTATAGCGATAGCAATTATTTACTGAGAGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCAAA > 1:3860856/1‑150 CATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCAAAT < 1:2722739/150‑1 ATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCAAATT > 1:3378375/1‑150 TCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCAAATTC < 2:4676143/150‑1 TCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCAAATTC < 2:4275683/150‑1 CTTTCTAGCGAGAGCAAGGATTGACTGAGCGTCGCGACCCTCCCCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACACGGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCAAATTCT < 2:5863429/150‑1 CTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCAAATTCT < 2:3323721/150‑1 CTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCAAATTCT < 1:6686035/150‑1 TATGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAATTGCTATCGCTATAAAGATGCCGGGAAATACAAACCATCCCGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4477418‑4477260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccggcatcTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACTTCCATACCGCCATGTAGGCCAAATTCT > NC_000913/4477291‑4477439 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |