BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	715264 =	NA (NA)	10 (0.030)	5/258	NT	NA	noncoding (1/98 nt)	RIP65 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP65 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	2549491 =	NA (NA)	10 (0.030)	5/258	NT	NA	noncoding (26/98 nt)	RIP176 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP176 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 484 total aligned reads displayed.

GAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAAT  >  NC_000913/715115‑715413

gAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTg                                                                                                                                                       >  2:3142204/1‑150 (MQ=255)

gAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTg                                                                                                                                                       >  1:229326/1‑150 (MQ=255)

 aaaGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGc                                                                                                                                                      <  1:479313/150‑1 (MQ=255)

 aaaGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGc                                                                                                                                                      <  1:5082515/150‑1 (MQ=255)

 aaaGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGATTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGc                                                                                                                                                      <  2:2789606/150‑1 (MQ=255)

  aaGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGcc                                                                                                                                                     <  2:3520611/150‑1 (MQ=255)

        ccTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATgc                                                                                                                                               <  2:4222666/150‑1 (MQ=255)

          tCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGACTTGCCTGATgcgc                                                                                                                                             >  2:4133295/1‑150 (MQ=255)

          tCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATgcgc                                                                                                                                             >  1:1854110/1‑150 (MQ=255)

            ggagaagaaCATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTATTACGTATGACAAACACAGAATTGCCTGATGCGCTa                                                                                                                                           <  2:341201/147‑1 (MQ=255)

              tGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACg                                                                                                                                         >  2:6521721/1‑150 (MQ=255)

                 agaaCATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCtt                                                                                                                                      <  1:3370173/150‑1 (MQ=255)

                     cATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCa                                                                                                                                  <  1:663150/150‑1 (MQ=255)

                      aTCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAg                                                                                                                                 >  2:4494547/1‑150 (MQ=255)

                       tCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAgg                                                                                                                                <  2:1091088/150‑1 (MQ=255)

                       tCGCAAGCAGATGGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGCTCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAgg                                                                                                                                <  2:6319206/150‑1 (MQ=255)

                        cagtaacattactgactggcctcagattgttgaccaagtgcgcgttgtacacgccggatgcggcgtgaacgccttatccggcctacgaaatcgtgctaattcaatatattgtgggctccacgtagGCCTGATGCGCTACGCTTATCAGGc                                                                                                                               >  2:1454731‑M1/126‑150 (MQ=255)

                        cagtaacattactgactggcctcagattgttgaccaagtgcgcgttgtacacgccggatgcggcgtgaacgccttatccggcctacgaaatcgtgctaattcaatatattgtgggctccacgtagGCCTGATGCGCTACGCTTATCAGGc                                                                                                                               >  1:4209952‑M1/126‑150 (MQ=255)

                        cGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCATTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGc                                                                                                                               <  1:5459486/150‑1 (MQ=255)

                           aaGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                                                            <  2:1839172/150‑1 (MQ=255)

                            aGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTAc                                                                                                                           <  1:1199973/150‑1 (MQ=255)

                              cAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGa                                                                                                                         <  1:3058044/150‑1 (MQ=255)

                               aGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAg                                                                                                                        >  2:238919/1‑150 (MQ=255)

                                ttactgactggcctcagattgttgaccaagtgcgcgttgtacacgccggatgcggcgtgaacgccttatccggcctacgaaatcgtgctaattcaatatattgtgggctccacgtagg                                                                                                                                                       <  2:6402891‑M1/1‑1 (MQ=255)

                                ttactgactggcctcagattgttgaccaagtgcgcgttgtacacgccggatgcggcgtgaacgccttatccggcctacgaaatcgtgctaattcaatatattgtgggctccacgtagg                                                                                                                                                       >  1:6402891‑M1/118‑118 (MQ=255)

                                 aTTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGa                                                                                                                      >  1:455008/1‑150 (MQ=255)

                                 aTTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACACTTATCAGGCCTACGAGGa                                                                                                                      >  2:2523617/1‑150 (MQ=255)

                                   tGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATg                                                                                                                    <  2:2252646/150‑1 (MQ=255)

                                     agaaagaaGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGt                                                                                                                  >  1:5140616/1‑150 (MQ=255)

                                       aaagaaGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGc                                                                                                                >  1:4090185/1‑150 (MQ=255)

                                              cGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAatatat                                                                                                         >  1:5658585/1‑150 (MQ=255)

                                               ggTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATAtt                                                                                                        <  2:3808385/150‑1 (MQ=255)

                                                  tGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAGTAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGaa                                                                                                     <  2:3031665/150‑1 (MQ=255)

                                                       ttGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTaa                                                                                                <  1:4973532/150‑1 (MQ=255)

                                                       ttGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTaa                                                                                                <  2:5279254/150‑1 (MQ=255)

                                                        tGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTACGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAg                                                                                               <  2:3678207/150‑1 (MQ=255)

                                                         gTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACTAAGAGAGAATTGCCTGTTGCGCTAGGCTTATCTGGCGTACGTGGATGGTGCGGTATATTGAATTTATGc                                                                                              >  2:5882023/1‑150 (MQ=255)

                                                              cGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGAttt                                                                                         <  2:4785319/150‑1 (MQ=255)

                                                               gAAGCTCAGCAAAACGCCTAAACACCTTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTATTTTACGTATGACAAACACAGACTTGCCTGATGCGCTACGCTTATCTGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGAtttt                                                                                        <  2:4572171/150‑1 (MQ=37)

                                                                  gTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTa                                                                                     <  2:2648026/150‑1 (MQ=255)

                                                                   ttCTTAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCATTTTTTACGTATGAAAAACACAGAATTGCCTTATGCTCTACGCTTATCAGGCATACGTGGATGGTGAATTATATTTAATTTAAGCGATTTTGTAg                                                                                    <  1:4413284/150‑1 (MQ=255)

                                                                   ttCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAg                                                                                    >  1:4133248/1‑150 (MQ=255)

                                                                     cTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATgcgc                                                                                                                                             <  2:1792248/91‑1 (MQ=255)

                                                                     cTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATgcgc                                                                                                                                             <  2:5180108/91‑1 (MQ=255)

                                                                     cTGAAAAACGCGAAAACACATTAAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGc                                                                                  <  1:5816570/150‑1 (MQ=255)

                                                                      tGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGcc                                                                                 >  1:241533/1‑150 (MQ=255)

                                                                       gAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCg                                                                                <  1:3856314/150‑1 (MQ=255)

                                                                       gAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCATTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCg                                                                                <  1:781368/150‑1 (MQ=255)

                                                                        aaaaaCGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCgg                                                                               >  1:6208980/1‑150 (MQ=255)

                                                                            aCGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATaa                                                                           <  2:5260147/150‑1 (MQ=255)

                                                                             cgcgTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAg                                                                          <  1:1092273/150‑1 (MQ=255)

                                                                              gcgTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAgg                                                                         <  2:5924840/150‑1 (MQ=255)

                                                                                gTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCg                                                                       >  1:3211596/1‑150 (MQ=255)

                                                                                 tAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTAGGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGt                                                                      <  2:1275329/150‑1 (MQ=255)

                                                                                 gaaaCACATTTAATACAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGt                                                                      <  2:6384000/149‑1 (MQ=255)

                                                                                    acacATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCg                                                                                >  1:4634891/1‑137 (MQ=255)

                                                                                       caTTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgc                                                                <  2:2094639/150‑1 (MQ=255)

                                                                                       caTTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgc                                                                <  1:6436284/150‑1 (MQ=255)

                                                                                        aTTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAAGATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgcc                                                               >  1:6053609/1‑150 (MQ=255)

                                                                                          ttAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgccgc                                                             >  1:5511030/1‑150 (MQ=255)

                                                                                              taaAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACCCAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATcc                                                         <  2:2582758/150‑1 (MQ=255)

                                                                                              taaAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATcc                                                         <  1:212353/150‑1 (MQ=255)

                                                                                               aaaaaaaGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                                        <  2:5711058/150‑1 (MQ=255)

                                                                                               aaaaaaaGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                                        <  2:6049623/150‑1 (MQ=255)

                                                                                                      gggCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaaaaa                                                 <  1:3754199/150‑1 (MQ=255)

                                                                                                       ggCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCCATATATTGAATTTAAGCGATTTTTTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAaac                                                >  1:175079/1‑150 (MQ=255)

                                                                                                       ggCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCAACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAaac                                                >  1:1577013/1‑150 (MQ=255)

                                                                                                       ggCGGTCGCAAGATCGCCATTTTTTACGTATGACAAACACACAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAaac                                                <  1:3471166/150‑1 (MQ=255)

                                                                                                        gCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAaaca                                               >  2:4299207/1‑150 (MQ=255)

                                                                                                         cGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCAGATGCGCGACGCATATCAGGCCGACGACGATGGTGCAATAAATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCCCATCCCGCCAAaacaa                                              >  1:140229/1‑150 (MQ=25)

                                                                                                           tacgaaatcgtgctaattcaatatattgtgggctccacgtagGCCTGATGCGCTACGCTTATCAGGc                                                                                                                               <  1:5248747‑M1/25‑1 (MQ=255)

                                                                                                             cGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGaa                                          >  1:2834563/1‑150 (MQ=255)

                                                                                                             cGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGaa                                          <  2:666177/150‑1 (MQ=255)

                                                                                                                     cGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGt                                  <  2:4848323/150‑1 (MQ=255)

                                                                                                                       cccTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGTTGTGGCAAAAAATTTAATTAAACGAATTTTTTTGGCGGGTTATGGCGTAAACGCCCAAGCCGCAAAAAACACCGAACACttttaaa                                >  1:5016391/1‑146 (MQ=12)

                                                                                                                        ccTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCg                                                                                <  1:264286/101‑1 (MQ=255)

                                                                                                                        ccTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTcaa                               <  1:4320976/150‑1 (MQ=255)

                                                                                                                        ccTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTcaa                               >  2:821503/1‑150 (MQ=255)

                                                                                                                        ccTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACCAGGATGGTGCAATATATTGAATTTAAGCGATTTTTTATGCCGGATAAGGCGTTCACGCCCCAACCGGCAAAAACAACCAACACATTGTcaa                               >  1:5926174/1‑150 (MQ=25)

                                                                                                                          ttttttACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTcaaca                             <  2:395170/150‑1 (MQ=255)

                                                                                                                          ttttttACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTcaaca                             >  2:3752185/1‑150 (MQ=255)

                                                                                                                          ttttttACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTcaaca                             >  2:2950988/1‑150 (MQ=255)

                                                                                                                            ttttACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACaaa                           <  1:6777878/150‑1 (MQ=255)

                                                                                                                                  gTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGt                     <  1:6346806/150‑1 (MQ=255)

                                                                                                                                  gTATGACAAACACAGAAGTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGt                     <  1:3567820/150‑1 (MQ=255)

                                                                                                                                   tATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTa                    <  1:2978908/150‑1 (MQ=255)

                                                                                                                                    aggACAAACACAGACGTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAg                   <  2:5326274/148‑1 (MQ=255)

                                                                                                                                     tGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGc                  <  1:828978/150‑1 (MQ=255)

                                                                                                                                       aCAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCTCGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTTGCTc                >  2:4033540/1‑150 (MQ=255)

                                                                                                                                       aCAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTc                >  2:1970336/1‑150 (MQ=255)

                                                                                                                                       aCAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATAGTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTc                >  2:6202115/1‑150 (MQ=255)

                                                                                                                                         aaaCACAGAAGTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCaa              <  1:2020305/150‑1 (MQ=255)

                                                                                                                                          aaCACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAg             <  1:2532166/150‑1 (MQ=255)

                                                                                                                                          aaCACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAg             <  1:6676325/150‑1 (MQ=255)

                                                                                                                                           acacAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAatata                                                                                                          >  2:5483648/1‑56 (MQ=255)

                                                                                                                                                 aaTTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATcc      >  1:6331287/1‑150 (MQ=255)

                                                                                                                                                   ttGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCa    <  2:2316005/150‑1 (MQ=255)

                                                                                                                                                    tGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCaa   <  1:394734/150‑1 (MQ=255)

                                                                                                                                                    tGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCACAAGGAAATCCCaa   >  1:560487/1‑150 (MQ=255)

                                                                                                                                                     GCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAAt  >  2:5035341‑M1/1‑150 (MQ=255)

GAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACTTTGTCAACAAACTGAGTAGCTCAAGGAAATCCCAAT  >  NC_000913/715115‑715413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.