| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4252622 | 150 (1.050) | 4 (0.030) | 3/266 | NT | 2.8% | coding (117/498 nt) | ubiC | chorismate‑‑pyruvate lyase |
| ? | NC_000913 | = 4252634 | 139 (1.020) | coding (129/498 nt) | ubiC | chorismate‑‑pyruvate lyase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4252468‑4252622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttttTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGATCTCTTTACAATAGCGCAGCGCACGCAGTTGCGTTAACGCGGGGTGTGACATGCCGAACTCTCCGTTAC < NC_000913/4252634‑4252489 GATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAAC > 1:1381911/1‑150GATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAAC > 2:2026780/1‑150 CAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT < 2:89111/150‑1 CAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT < 2:815307/150‑1 CAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT < 2:815280/150‑1 CAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT < 2:1916929/150‑1 CAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT < 1:784544/150‑1 CAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT < 1:359177/150‑1 CAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT < 1:2324451/150‑1 CAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT < 1:1986937/150‑1 CAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT < 1:1986853/150‑1 CAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT < 1:1734988/150‑1 CAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT < 1:1735152/150‑1 CAATGCCATTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTAAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTT < 2:1066661/150‑1 AATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTT < 1:1234334/150‑1 AATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTT > 1:162138/1‑150 AATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTT > 1:1680345/1‑150 AATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTT > 1:182107/1‑150 GGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTTTCCCTGCTGTTCAAAACGTTT > 2:2359616/1‑150 GAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTTTCCCTGCTGTTCAAAACGTTTT < 1:2359616/150‑1 CTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTTTCCCTGCTGTTCAAAACGTTTT > 2:1444370/1‑79 CTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTTTCCCTGCTGTTCAAAACGTTTT < 1:1444370/79‑1 GTTTTTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGATCTCTTTACAATAGCGCAGCGCACGCAGTTGCGTTAACGCGGGGTGTGACATGCCGAACTCTCCGTTA > 2:1502532/1‑150 GTTTTTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGATCTCTTTACAATAGCGCAGCGCACGCAGTTGCGTTAACGCGGGGTGTGACATGCCGAACTCTCCGTTA < 1:497387/150‑1 GTTTTTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGATCTCTTTACAATAGCGCAGCGCACGCAGTTGCGTTAACGCGGGGTGTGACATGCCGAACTCTCCGTTA > 2:2210139/1‑150 GTTTTTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGATCTCTTTACAATAGCGCAGCGCACGCAGTTGCGTTAACGCGGGGTGTGACATGCCGAACTCTCCGTTA < 1:1964280/150‑1 TTTTTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGATCTCTTTACAATAGCGCAGCGCACGCAGTTGCGTTAACGCGGGGTGTGACATGCCGAACTCTCCGTTAC > 2:2290715/1‑150 TTTTTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGATCTCTTTACAATAGCGCAGCGCACGCAGTTGCGTTAACGCGGGGTGTGACATGCCGAACTCTCCGTTAC > 2:443670/1‑150 GATACAATGCCTTTACGTTATGTAACGGAGAGTTCGGCATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4252468‑4252622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttttTCCCTGCTGTTCAAAACGTTTTGTCATGGAATCCTCCAGCAACAGCCAGTCGAGCAGTTGCGGATCCAGGGCAGGGATCTCTTTACAATAGCGCAGCGCACGCAGTTGCGTTAACGCGGGGTGTGACATGCCGAACTCTCCGTTAC < NC_000913/4252634‑4252489 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |