Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 4,640,551 IS1 (–) +9 bp 100% intergenic (+9/‑383) yjjY → / → yjtD uncharacterized protein/putative methyltransferase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)120 (0.840) 64/278 NT 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4640551 = 0 (0.000)intergenic (+9/‑391) yjjY/yjtD uncharacterized protein/putative methyltransferase
* ? NC_000913 = 3584195NA (NA)159 (1.120) 74/276 NT 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 4640559 0 (0.000)intergenic (+17/‑383) yjjY/yjtD uncharacterized protein/putative methyltransferase

Only 100 of 303 total aligned reads displayed.

GTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGG  >  NC_000913/4640411‑4640708
                                                                                                                                                    |                                                                                                                                                     
gTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGg                                                                                                                                                      >  2:619211‑M2/1‑149 (MQ=255)
 tACGAAATTGCGTACTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGACAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACAAAACAGGCTAACAGGGGCCGgg                                                                                                                                                     <  1:385311‑M2/150‑3 (MQ=255)
 ctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGa                                                                                                                                                     <  2:2244594‑M2/11‑1 (MQ=255)
 ctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGa                                                                                                                                                     <  1:1725317‑M2/11‑1 (MQ=255)
 ctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGa                                                                                                                                                     <  2:1765101‑M2/11‑1 (MQ=255)
 ctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGa                                                                                                                                                     <  2:2124246‑M2/11‑1 (MQ=255)
    gTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaa                                                                                                                                                  <  2:523103‑M2/150‑6 (MQ=255)
      gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACAccc                                                                                                                                                <  2:323918‑M2/16‑1 (MQ=255)
      gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACAccc                                                                                                                                                <  2:2213413‑M2/16‑1 (MQ=255)
       aTTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatga                                                                                                                                               >  1:2325329‑M2/1‑142 (MQ=255)
        ccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCaa                                                                                                                                              <  2:385529‑M2/18‑1 (MQ=255)
            gTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactcca                                                                                                                                          <  2:2034490‑M2/150‑14 (MQ=255)
            gTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGAAACATAACAGGCTAAGAGGGGCCGggtaatgactcca                                                                                                                                          <  2:1524277‑M2/150‑14 (MQ=255)
             ttCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaa                                                                                                                                         <  2:1937211‑M2/150‑15 (MQ=255)
                  gATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACATTTTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCACCATACAAGGCTAAGAGGGGCCGggaaatgacaccaactaat                                                                                                                                    <  2:2294611‑M2/150‑20 (MQ=255)
                   tttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGc                                                                                                                                   >  2:1442‑M2/122‑150 (MQ=255)
                    ttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATACAACTACGCt                                                                                                                                  >  2:1191825‑M2/121‑150 (MQ=255)
                    ttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCt                                                                                                                                  >  2:184822‑M2/121‑150 (MQ=255)
                     gCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattga                                                                                                                                 <  2:872035‑M2/150‑23 (MQ=255)
                        ctttacgcaccaccccgtcagtagcttaacaggagggacagcttatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGt                                                                                                                              <  2:10512‑M2/34‑1 (MQ=255)
                        cgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGt                                                                                                                              <  2:12430‑M2/34‑1 (MQ=255)
                          ttCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtg                                                                                                                            >  2:1609887‑M2/1‑123 (MQ=255)
                             cgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACa                                                                                                                         <  1:102624‑M2/39‑1 (MQ=255)
                               tCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgtttta                                                                                                                       <  1:128879‑M2/150‑33 (MQ=255)
                               tCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgtttta                                                                                                                       <  2:243539‑M2/150‑33 (MQ=255)
                               tCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgtttta                                                                                                                       <  2:831120‑M2/150‑33 (MQ=255)
                                cAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttat                                                                                                                      >  2:1015286‑M2/1‑117 (MQ=255)
                                 aaCGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatg                                                                                                                     <  1:1658857‑M2/150‑35 (MQ=255)
                                 aaCGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatg                                                                                                                     <  2:1429492‑M2/150‑35 (MQ=255)
                                  aCGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgt                                                                                                                    <  1:654347‑M2/150‑36 (MQ=255)
                                      ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAg                                                                                                                >  1:290800‑M2/103‑150 (MQ=255)
                                       cgtcagtagctgaacaggagggacagctgatagaaacggaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGt                                                                                                               >  1:2046740‑M2/102‑150 (MQ=255)
                                           agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCaa                                                                                                           >  2:903045‑M2/98‑150 (MQ=255)
                                            gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAAt                                                                                                          <  1:183246‑M2/54‑1 (MQ=255)
                                             tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAAtt                                                                                                         <  1:993123‑M2/55‑1 (MQ=255)
                                             tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAAtt                                                                                                         <  1:635134‑M2/55‑1 (MQ=255)
                                               gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGt                                                                                                       >  2:1507005‑M2/94‑150 (MQ=255)
                                                ctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTa                                                                                                      >  1:1803814‑M2/93‑150 (MQ=255)
                                                     caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACg                                                                                                 <  1:1740876‑M2/63‑1 (MQ=255)
                                                        gagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTa                                                                                              >  2:1825163‑M2/85‑150 (MQ=255)
                                                          tCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt                                                                                            >  1:807076‑M2/1‑91 (MQ=255)
                                                          tCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt                                                                                            >  1:1158640‑M2/1‑91 (MQ=255)
                                                            gTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                                          >  1:872035‑M2/1‑89 (MQ=255)
                                                               ggTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCGGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataattcccgatgactttgtcatgc                                                                                       >  1:914043‑M2/1‑86 (MQ=255)
                                                               agctgatagaaacagaagccagtggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGttt                                                                                       <  1:1292895‑M2/73‑1 (MQ=255)
                                                                    tttCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                                                                                  <  1:1321823‑M2/150‑70 (MQ=255)
                                                                     ttCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc                                                                                 >  1:1920319‑M2/1‑80 (MQ=255)
                                                                        ccTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacc                                                                              <  2:397976‑M2/150‑74 (MQ=255)
                                                                         cTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccg                                                                             <  1:1957920‑M2/150‑75 (MQ=255)
                                                                           cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAatcatc                                                                           <  1:2274093‑M2/85‑1 (MQ=255)
                                                                           cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAatcatc                                                                           <  2:484521‑M2/85‑1 (MQ=255)
                                                                           cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAatcatc                                                                           >  1:265190‑M2/66‑150 (MQ=255)
                                                                             gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGt                                                                         <  2:1197120‑M2/87‑1 (MQ=255)
                                                                             gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGt                                                                         <  1:695143‑M2/87‑1 (MQ=255)
                                                                              gACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                                        <  2:293051‑M2/150‑80 (MQ=255)
                                                                              aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTa                                                                        <  1:1124215‑M2/88‑1 (MQ=255)
                                                                                cccGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                                      <  2:2332939‑M2/150‑82 (MQ=255)
                                                                                cccGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                                      <  2:962019‑M2/150‑82 (MQ=255)
                                                                                   actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTaa                                                                   >  1:2216034‑M2/58‑150 (MQ=255)
                                                                                    ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTaaa                                                                  <  2:1785006‑M2/94‑1 (MQ=255)
                                                                                    ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTaaa                                                                  <  2:521610‑M2/94‑1 (MQ=255)
                                                                                        tgtCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                                              >  1:1774388‑M2/1‑61 (MQ=255)
                                                                                          tCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgagagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                            <  2:552007‑M2/150‑92 (MQ=255)
                                                                                          tCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgagagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                                            <  2:377388‑M2/150‑92 (MQ=255)
                                                                                            aaaaaCGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcga                                                          <  1:2344223‑M2/150‑94 (MQ=255)
                                                                                             ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCtt                                                         >  1:443966‑M2/48‑150 (MQ=255)
                                                                                             aaaaCGGTTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataattcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgac                                                         <  2:232355‑M2/150‑95 (MQ=255)
                                                                                             aaaaCGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgac                                                         <  2:1564658‑M2/150‑95 (MQ=255)
                                                                                              tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCttt                                                        >  1:1570686‑M2/47‑150 (MQ=255)
                                                                                              aaaCGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgact                                                        <  1:1612753‑M2/150‑96 (MQ=255)
                                                                                                 cGGCTGTCATCCTAACCAATTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaaggactccaacttcttgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc                                                     >  2:1663790‑M2/1‑52 (MQ=255)
                                                                                                 aaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGt                                                     <  1:2164713‑M2/107‑1 (MQ=255)
                                                                                                       tCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccca                                               <  2:686274‑M2/150‑105 (MQ=255)
                                                                                                       tCACCCTAACCAATTTAACAGCAACATAACCGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgccagatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccca                                               >  2:508958‑M2/1‑46 (MQ=255)
                                                                                                         aTCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagc                                             <  2:1079262‑M2/150‑107 (MQ=255)
                                                                                                          tCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagcc                                            <  2:379629‑M2/150‑108 (MQ=255)
                                                                                                               cactaaatcagtaagttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACAttattttttt                                       <  2:1452247‑M2/121‑4 (MQ=255)
                                                                                                                     ttAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttcttgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgc                                 >  1:1543993‑M2/1‑32 (MQ=255)
                                                                                                                      tAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                                >  2:1658857‑M2/1‑31 (MQ=255)
                                                                                                                      tAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                                >  2:1582048‑M2/1‑31 (MQ=255)
                                                                                                                      tAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                                <  1:786136‑M2/150‑120 (MQ=255)
                                                                                                                      tAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                                <  1:607132‑M2/150‑120 (MQ=255)
                                                                                                                      tAACAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                                <  1:512221‑M2/150‑120 (MQ=255)
                                                                                                                       aaCAGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctg                               <  1:1066942‑M2/150‑121 (MQ=255)
                                                                                                                          aGCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct                            <  2:968326‑M2/150‑124 (MQ=255)
                                                                                                                           gCAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc                           <  2:1316149‑M2/150‑125 (MQ=255)
                                                                                                                            cAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctca                          >  2:273923‑M2/1‑25 (MQ=255)
                                                                                                                            cAACATAACAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctca                          >  2:592338‑M2/1‑25 (MQ=255)
                                                                                                                             gttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTg                         <  2:1891576‑M2/135‑1 (MQ=255)
                                                                                                                              ttggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGc                        >  2:2258230‑M2/15‑150 (MQ=255)
                                                                                                                               tggcagcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGca                       <  2:652992‑M2/137‑1 (MQ=255)
                                                                                                                                  aaCAGGCTAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca                    <  2:1988157‑M2/150‑132 (MQ=255)
                                                                                                                                    gcatcaccGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATa                  <  1:1331376‑M2/142‑1 (MQ=255)
                                                                                                                                         tAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatg             >  1:960112‑M2/1‑12 (MQ=255)
                                                                                                                                         tAAGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatg             <  1:421789‑M2/150‑139 (MQ=255)
                                                                                                                                         accGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACt             <  2:434248‑M2/147‑1 (MQ=255)
                                                                                                                                         accGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACt             >  1:146019‑M2/4‑150 (MQ=255)
                                                                                                                                          aaGAGGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc            <  1:528372‑M2/150‑140 (MQ=255)
                                                                                                                                               gggCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccgctc       <  1:1430643‑M2/150‑145 (MQ=255)
                                                                                                                                                    ggACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAATTGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACgtgg  <  2:1421049/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAACAGGCTAAGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTAATAAACGTGG  >  NC_000913/4640411‑4640708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.